EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002278 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6204 bases
Position: chrscaffold_717:767-6970
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000002958	DEAD	PF00270.29	6.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000002969	-	1240	-	ENSGACP00000002958	254 (aa)	-	G3NCA9

Gene Model

Click here to download ENSGACG00000002278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002278's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002278	-	100	33.582	ENSGACG00000007092	ddx47	52	33.582

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002278	-	100	57.343	ENSCPBG00000021215	DDX31	51	57.343	Chrysemys_picta_bellii
ENSGACG00000002278	-	100	44.803	ENSCSAVG00000004227	-	53	44.803	Ciona_savignyi
ENSGACG00000002278	-	100	59.028	ENSCANG00000036241	DDX31	50	56.148	Colobus_angolensis_palliatus
ENSGACG00000002278	-	99	43.299	ENSEBUG00000014723	-	68	43.299	Eptatretus_burgeri
ENSGACG00000002278	-	100	72.441	ENSGMOG00000007128	-	100	72.441	Gadus_morhua
ENSGACG00000002278	-	100	55.363	ENSGALG00000041473	DDX31	58	55.363	Gallus_gallus
ENSGACG00000002278	-	100	73.741	ENSKMAG00000006165	ddx31	52	73.741	Kryptolebias_marmoratus
ENSGACG00000002278	-	100	54.452	ENSLACG00000008136	DDX31	53	54.452	Latimeria_chalumnae
ENSGACG00000002278	-	100	71.429	ENSSLDG00000005425	-	58	71.429	Seriola_lalandi_dorsalis
ENSGACG00000002278	-	100	71.377	ENSTRUG00000013699	ddx31	61	71.377	Takifugu_rubripes
ENSGACG00000002278	-	100	64.855	ENSXCOG00000018753	ddx31	56	64.855	Xiphophorus_couchianus