EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002304 (Gene tree)
Gene ID: -
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: polymerase (RNA) III (DNA directed) polypeptide A
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 14797 bases
Position: chrgroupV:664122-678918
Accession: ZDB-GENE-050208-103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003008	RNA_pol_Rpb1_5	PF04998.17	5.6e-88	1	1
ENSGACP00000003001	RNA_pol_Rpb1_5	PF04998.17	5.9e-88	1	1
ENSGACP00000003001	RNA_pol_Rpb1_4	PF05000.17	5.4e-32	1	1
ENSGACP00000003008	RNA_pol_Rpb1_4	PF05000.17	6.2e-32	1	1
ENSGACP00000003008	RNA_pol_Rpb1_2	PF00623.20	4.9e-73	1	1
ENSGACP00000003001	RNA_pol_Rpb1_2	PF00623.20	2.7e-70	1	1
ENSGACP00000003008	RNA_pol_Rpb1_3	PF04983.18	5.7e-40	1	1
ENSGACP00000003001	RNA_pol_Rpb1_3	PF04983.18	6.2e-40	1	1
ENSGACP00000003008	RNA_pol_Rpb1_1	PF04997.12	1.2e-91	1	1
ENSGACP00000003001	RNA_pol_Rpb1_1	PF04997.12	1.3e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003012	-	4900	-	ENSGACP00000003001	1439 (aa)	-	G3NCF2
ENSGACT00000003019	-	4736	-	ENSGACP00000003008	1390 (aa)	-	G3NCF8

Gene Model

Click here to download ENSGACG00000002304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002304	polr3a	91	38.022	ENSGACG00000019366	polr2a	79	38.022
ENSGACG00000002304	polr3a	62	45.098	ENSGACG00000018791	polr1a	51	46.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002304	polr3a	100	89.496	ENSG00000148606	POLR3A	98	91.772	Homo_sapiens
ENSGACG00000002304	polr3a	62	91.986	ENSAPOG00000022727	polr3a	99	91.986	Acanthochromis_polyacanthus
ENSGACG00000002304	polr3a	100	89.232	ENSAMEG00000017801	POLR3A	100	89.232	Ailuropoda_melanoleuca
ENSGACG00000002304	polr3a	94	95.462	ENSACIG00000024504	polr3a	97	95.462	Amphilophus_citrinellus
ENSGACG00000002304	polr3a	100	92.086	ENSAOCG00000003949	-	100	92.086	Amphiprion_ocellaris
ENSGACG00000002304	polr3a	100	95.468	ENSAOCG00000002071	polr3a	100	95.468	Amphiprion_ocellaris
ENSGACG00000002304	polr3a	100	95.468	ENSAPEG00000013351	polr3a	100	95.468	Amphiprion_percula
ENSGACG00000002304	polr3a	100	95.324	ENSAPEG00000001966	-	100	95.324	Amphiprion_percula
ENSGACG00000002304	polr3a	100	94.388	ENSATEG00000023277	polr3a	100	94.388	Anabas_testudineus
ENSGACG00000002304	polr3a	99	89.745	ENSAPLG00000015878	POLR3A	99	89.745	Anas_platyrhynchos
ENSGACG00000002304	polr3a	93	88.541	ENSACAG00000007985	POLR3A	99	88.541	Anolis_carolinensis
ENSGACG00000002304	polr3a	100	86.997	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSGACG00000002304	polr3a	100	95.324	ENSACLG00000005914	polr3a	100	95.324	Astatotilapia_calliptera
ENSGACG00000002304	polr3a	100	88.489	ENSAMXG00000018852	polr3a	100	88.489	Astyanax_mexicanus
ENSGACG00000002304	polr3a	100	89.640	ENSBTAG00000013259	POLR3A	100	89.640	Bos_taurus
ENSGACG00000002304	polr3a	98	56.693	WBGene00004411	rpc-1	99	56.693	Caenorhabditis_elegans
ENSGACG00000002304	polr3a	100	89.281	ENSCJAG00000001015	POLR3A	100	89.281	Callithrix_jacchus
ENSGACG00000002304	polr3a	100	89.496	ENSCAFG00000015546	POLR3A	100	89.496	Canis_familiaris
ENSGACG00000002304	polr3a	100	89.496	ENSCAFG00020014711	POLR3A	100	89.496	Canis_lupus_dingo
ENSGACG00000002304	polr3a	100	89.496	ENSCHIG00000000352	POLR3A	100	89.496	Capra_hircus
ENSGACG00000002304	polr3a	100	89.137	ENSTSYG00000006671	POLR3A	100	89.137	Carlito_syrichta
ENSGACG00000002304	polr3a	99	89.018	ENSCAPG00000016031	POLR3A	100	89.018	Cavia_aperea
ENSGACG00000002304	polr3a	100	89.065	ENSCPOG00000022387	POLR3A	100	89.065	Cavia_porcellus
ENSGACG00000002304	polr3a	100	88.129	ENSCCAG00000032995	POLR3A	100	88.129	Cebus_capucinus
ENSGACG00000002304	polr3a	100	89.496	ENSCATG00000035842	POLR3A	98	91.772	Cercocebus_atys
ENSGACG00000002304	polr3a	100	89.065	ENSCLAG00000009629	POLR3A	100	89.065	Chinchilla_lanigera
ENSGACG00000002304	polr3a	100	89.496	ENSCSAG00000009292	POLR3A	100	89.496	Chlorocebus_sabaeus
ENSGACG00000002304	polr3a	85	75.000	ENSCHOG00000008368	POLR3A	100	75.000	Choloepus_hoffmanni
ENSGACG00000002304	polr3a	99	89.705	ENSCPBG00000002079	POLR3A	99	89.705	Chrysemys_picta_bellii
ENSGACG00000002304	polr3a	99	68.588	ENSCSAVG00000009925	-	99	68.588	Ciona_savignyi
ENSGACG00000002304	polr3a	86	85.141	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSGACG00000002304	polr3a	78	89.882	ENSCGRG00001015599	-	93	89.103	Cricetulus_griseus_chok1gshd
ENSGACG00000002304	polr3a	88	88.270	ENSCGRG00000001019	Polr3a	100	88.270	Cricetulus_griseus_crigri
ENSGACG00000002304	polr3a	100	94.892	ENSCSEG00000016653	polr3a	100	94.892	Cynoglossus_semilaevis
ENSGACG00000002304	polr3a	100	93.453	ENSCVAG00000023049	polr3a	100	93.453	Cyprinodon_variegatus
ENSGACG00000002304	polr3a	99	91.282	ENSDARG00000102569	polr3a	99	91.282	Danio_rerio
ENSGACG00000002304	polr3a	100	88.705	ENSDNOG00000010194	POLR3A	100	88.705	Dasypus_novemcinctus
ENSGACG00000002304	polr3a	100	89.353	ENSDORG00000000184	Polr3a	100	89.353	Dipodomys_ordii
ENSGACG00000002304	polr3a	99	56.484	FBgn0030687	CG17209	99	56.484	Drosophila_melanogaster
ENSGACG00000002304	polr3a	88	89.879	ENSETEG00000007477	POLR3A	83	96.203	Echinops_telfairi
ENSGACG00000002304	polr3a	59	75.615	ENSEBUG00000013761	polr3a	98	75.615	Eptatretus_burgeri
ENSGACG00000002304	polr3a	100	89.424	ENSEASG00005023053	POLR3A	100	89.424	Equus_asinus_asinus
ENSGACG00000002304	polr3a	97	89.493	ENSECAG00000019416	POLR3A	100	89.174	Equus_caballus
ENSGACG00000002304	polr3a	96	84.787	ENSEEUG00000001774	POLR3A	100	84.787	Erinaceus_europaeus
ENSGACG00000002304	polr3a	100	90.883	ENSELUG00000014016	polr3a	100	90.883	Esox_lucius
ENSGACG00000002304	polr3a	100	89.568	ENSFCAG00000000843	POLR3A	100	89.568	Felis_catus
ENSGACG00000002304	polr3a	100	89.432	ENSFALG00000006913	POLR3A	100	89.432	Ficedula_albicollis
ENSGACG00000002304	polr3a	100	89.353	ENSFDAG00000007813	POLR3A	100	89.353	Fukomys_damarensis
ENSGACG00000002304	polr3a	95	93.289	ENSFHEG00000011922	polr3a	99	93.289	Fundulus_heteroclitus
ENSGACG00000002304	polr3a	100	88.535	ENSGMOG00000000291	polr3a	100	88.276	Gadus_morhua
ENSGACG00000002304	polr3a	100	89.784	ENSGALG00000004947	POLR3A	100	89.784	Gallus_gallus
ENSGACG00000002304	polr3a	100	93.597	ENSGAFG00000005112	polr3a	100	93.597	Gambusia_affinis
ENSGACG00000002304	polr3a	95	89.553	ENSGAGG00000010386	POLR3A	98	89.553	Gopherus_agassizii
ENSGACG00000002304	polr3a	99	88.439	ENSGGOG00000027729	POLR3A	100	90.468	Gorilla_gorilla
ENSGACG00000002304	polr3a	100	95.324	ENSHBUG00000018098	polr3a	100	95.324	Haplochromis_burtoni
ENSGACG00000002304	polr3a	100	89.137	ENSHGLG00000017899	POLR3A	100	89.137	Heterocephalus_glaber_female
ENSGACG00000002304	polr3a	100	89.137	ENSHGLG00100008483	POLR3A	100	89.137	Heterocephalus_glaber_male
ENSGACG00000002304	polr3a	100	93.525	ENSHCOG00000001075	polr3a	100	93.525	Hippocampus_comes
ENSGACG00000002304	polr3a	100	89.281	ENSSTOG00000012983	POLR3A	100	89.281	Ictidomys_tridecemlineatus
ENSGACG00000002304	polr3a	100	94.101	ENSKMAG00000015290	polr3a	100	94.101	Kryptolebias_marmoratus
ENSGACG00000002304	polr3a	99	94.168	ENSLBEG00000017214	polr3a	99	94.168	Labrus_bergylta
ENSGACG00000002304	polr3a	97	87.361	ENSLACG00000018557	POLR3A	99	87.361	Latimeria_chalumnae
ENSGACG00000002304	polr3a	100	91.816	ENSLOCG00000004942	polr3a	100	91.816	Lepisosteus_oculatus
ENSGACG00000002304	polr3a	100	87.994	ENSLAFG00000016719	POLR3A	100	87.994	Loxodonta_africana
ENSGACG00000002304	polr3a	100	89.424	ENSMFAG00000032218	POLR3A	100	89.424	Macaca_fascicularis
ENSGACG00000002304	polr3a	100	89.424	ENSMMUG00000005514	POLR3A	98	91.772	Macaca_mulatta
ENSGACG00000002304	polr3a	99	83.274	ENSMNEG00000035163	POLR3A	99	88.879	Macaca_nemestrina
ENSGACG00000002304	polr3a	100	86.043	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSGACG00000002304	polr3a	100	94.964	ENSMAMG00000017497	polr3a	100	94.964	Mastacembelus_armatus
ENSGACG00000002304	polr3a	100	95.324	ENSMZEG00005000576	polr3a	100	95.324	Maylandia_zebra
ENSGACG00000002304	polr3a	100	72.372	ENSMGAG00000005713	-	100	72.372	Meleagris_gallopavo
ENSGACG00000002304	polr3a	100	87.122	ENSMAUG00000016247	Polr3a	100	87.122	Mesocricetus_auratus
ENSGACG00000002304	polr3a	100	89.424	ENSMICG00000005937	POLR3A	100	90.530	Microcebus_murinus
ENSGACG00000002304	polr3a	100	89.209	ENSMOCG00000012185	Polr3a	100	89.209	Microtus_ochrogaster
ENSGACG00000002304	polr3a	100	94.317	ENSMMOG00000013822	polr3a	100	94.317	Mola_mola
ENSGACG00000002304	polr3a	100	89.065	ENSMODG00000001036	POLR3A	100	89.065	Monodelphis_domestica
ENSGACG00000002304	polr3a	100	94.820	ENSMALG00000001249	polr3a	100	94.820	Monopterus_albus
ENSGACG00000002304	polr3a	100	89.209	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.209	Mus_caroli
ENSGACG00000002304	polr3a	100	89.281	ENSMUSG00000025280	Polr3a	100	89.281	Mus_musculus
ENSGACG00000002304	polr3a	100	89.209	MGP_PahariEiJ_G0030029	Polr3a	100	89.209	Mus_pahari
ENSGACG00000002304	polr3a	100	86.619	MGP_SPRETEiJ_G0019894	Polr3a	97	96.040	Mus_spretus
ENSGACG00000002304	polr3a	100	88.802	ENSMPUG00000003790	POLR3A	100	88.802	Mustela_putorius_furo
ENSGACG00000002304	polr3a	100	88.273	ENSMLUG00000011522	POLR3A	100	88.273	Myotis_lucifugus
ENSGACG00000002304	polr3a	100	87.986	ENSNGAG00000015863	Polr3a	100	87.986	Nannospalax_galili
ENSGACG00000002304	polr3a	100	93.525	ENSNBRG00000014262	polr3a	99	94.984	Neolamprologus_brichardi
ENSGACG00000002304	polr3a	87	83.486	ENSNLEG00000010501	POLR3A	92	83.486	Nomascus_leucogenys
ENSGACG00000002304	polr3a	99	76.727	ENSMEUG00000012446	POLR3A	93	84.579	Notamacropus_eugenii
ENSGACG00000002304	polr3a	100	84.532	ENSOPRG00000001880	-	100	84.532	Ochotona_princeps
ENSGACG00000002304	polr3a	100	88.561	ENSODEG00000015146	POLR3A	100	88.561	Octodon_degus
ENSGACG00000002304	polr3a	100	95.468	ENSONIG00000016129	polr3a	100	95.468	Oreochromis_niloticus
ENSGACG00000002304	polr3a	98	88.824	ENSOANG00000007013	POLR3A	100	88.824	Ornithorhynchus_anatinus
ENSGACG00000002304	polr3a	100	88.921	ENSOCUG00000012450	POLR3A	100	88.921	Oryctolagus_cuniculus
ENSGACG00000002304	polr3a	100	93.885	ENSORLG00000008958	polr3a	100	93.885	Oryzias_latipes
ENSGACG00000002304	polr3a	100	91.727	ENSORLG00020007525	polr3a	98	94.113	Oryzias_latipes_hni
ENSGACG00000002304	polr3a	100	93.885	ENSORLG00015006633	polr3a	100	93.885	Oryzias_latipes_hsok
ENSGACG00000002304	polr3a	100	93.309	ENSOMEG00000012865	polr3a	100	93.309	Oryzias_melastigma
ENSGACG00000002304	polr3a	100	89.209	ENSOGAG00000010995	POLR3A	100	89.209	Otolemur_garnettii
ENSGACG00000002304	polr3a	100	89.368	ENSOARG00000009656	POLR3A	100	89.368	Ovis_aries
ENSGACG00000002304	polr3a	100	89.568	ENSPPRG00000002128	POLR3A	100	89.568	Panthera_pardus
ENSGACG00000002304	polr3a	100	89.568	ENSPTIG00000020916	POLR3A	100	89.568	Panthera_tigris_altaica
ENSGACG00000002304	polr3a	100	89.568	ENSPTRG00000002664	POLR3A	98	91.772	Pan_troglodytes
ENSGACG00000002304	polr3a	100	89.424	ENSPANG00000022508	POLR3A	98	91.772	Papio_anubis
ENSGACG00000002304	polr3a	100	91.655	ENSPKIG00000008140	polr3a	100	91.655	Paramormyrops_kingsleyae
ENSGACG00000002304	polr3a	98	89.554	ENSPSIG00000002092	POLR3A	100	89.554	Pelodiscus_sinensis
ENSGACG00000002304	polr3a	100	89.065	ENSPEMG00000006768	Polr3a	100	89.065	Peromyscus_maniculatus_bairdii
ENSGACG00000002304	polr3a	100	89.137	ENSPCIG00000015842	POLR3A	100	89.137	Phascolarctos_cinereus
ENSGACG00000002304	polr3a	54	94.228	ENSPFOG00000006458	polr3a	100	94.228	Poecilia_formosa
ENSGACG00000002304	polr3a	100	93.741	ENSPLAG00000000997	polr3a	100	93.741	Poecilia_latipinna
ENSGACG00000002304	polr3a	100	93.669	ENSPMEG00000006821	polr3a	100	93.669	Poecilia_mexicana
ENSGACG00000002304	polr3a	100	93.741	ENSPREG00000002385	polr3a	100	93.741	Poecilia_reticulata
ENSGACG00000002304	polr3a	93	89.372	ENSPPYG00000002305	POLR3A	99	89.372	Pongo_abelii
ENSGACG00000002304	polr3a	84	78.244	ENSPCAG00000005690	POLR3A	87	78.244	Procavia_capensis
ENSGACG00000002304	polr3a	100	89.281	ENSPCOG00000028311	POLR3A	100	89.281	Propithecus_coquereli
ENSGACG00000002304	polr3a	100	87.986	ENSPVAG00000015553	POLR3A	100	87.986	Pteropus_vampyrus
ENSGACG00000002304	polr3a	100	95.396	ENSPNYG00000020987	polr3a	100	95.396	Pundamilia_nyererei
ENSGACG00000002304	polr3a	99	87.752	ENSPNAG00000006629	polr3a	99	87.752	Pygocentrus_nattereri
ENSGACG00000002304	polr3a	100	89.137	ENSRNOG00000010008	Polr3a	100	89.137	Rattus_norvegicus
ENSGACG00000002304	polr3a	100	85.920	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSGACG00000002304	polr3a	100	89.568	ENSRROG00000025527	POLR3A	98	91.772	Rhinopithecus_roxellana
ENSGACG00000002304	polr3a	98	49.287	YOR116C	RPO31	99	49.287	Saccharomyces_cerevisiae
ENSGACG00000002304	polr3a	100	89.424	ENSSBOG00000022199	POLR3A	100	89.424	Saimiri_boliviensis_boliviensis
ENSGACG00000002304	polr3a	100	89.065	ENSSHAG00000007588	POLR3A	94	89.065	Sarcophilus_harrisii
ENSGACG00000002304	polr3a	100	92.734	ENSSFOG00015014357	polr3a	100	92.734	Scleropages_formosus
ENSGACG00000002304	polr3a	100	95.108	ENSSMAG00000001780	polr3a	100	95.108	Scophthalmus_maximus
ENSGACG00000002304	polr3a	100	95.755	ENSSDUG00000019840	polr3a	100	95.755	Seriola_dumerili
ENSGACG00000002304	polr3a	100	95.899	ENSSLDG00000023908	polr3a	100	95.899	Seriola_lalandi_dorsalis
ENSGACG00000002304	polr3a	69	89.655	ENSSARG00000009916	POLR3A	89	89.655	Sorex_araneus
ENSGACG00000002304	polr3a	100	87.554	ENSSPUG00000013209	POLR3A	97	90.746	Sphenodon_punctatus
ENSGACG00000002304	polr3a	100	95.036	ENSSPAG00000017712	polr3a	100	95.036	Stegastes_partitus
ENSGACG00000002304	polr3a	100	89.281	ENSSSCG00000010327	POLR3A	100	89.362	Sus_scrofa
ENSGACG00000002304	polr3a	100	89.496	ENSTGUG00000006423	-	100	89.496	Taeniopygia_guttata
ENSGACG00000002304	polr3a	100	93.741	ENSTRUG00000013488	polr3a	100	93.741	Takifugu_rubripes
ENSGACG00000002304	polr3a	100	94.253	ENSTNIG00000013151	polr3a	100	94.253	Tetraodon_nigroviridis
ENSGACG00000002304	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSGACG00000002304	polr3a	100	82.878	ENSTTRG00000007817	POLR3A	97	88.180	Tursiops_truncatus
ENSGACG00000002304	polr3a	100	87.122	ENSUAMG00000011283	POLR3A	100	87.122	Ursus_americanus
ENSGACG00000002304	polr3a	100	89.424	ENSUMAG00000013913	POLR3A	100	89.424	Ursus_maritimus
ENSGACG00000002304	polr3a	99	81.527	ENSVPAG00000003285	POLR3A	98	88.286	Vicugna_pacos
ENSGACG00000002304	polr3a	100	89.496	ENSVVUG00000025523	POLR3A	100	89.496	Vulpes_vulpes
ENSGACG00000002304	polr3a	86	89.223	ENSXETG00000018101	polr3a	100	89.223	Xenopus_tropicalis
ENSGACG00000002304	polr3a	100	93.885	ENSXMAG00000015213	polr3a	100	93.885	Xiphophorus_maculatus