EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002329 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 369 bases
Position: chrgroupX:1714880-1715248
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003029	LSM	PF01423.22	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003040	-	369	-	ENSGACP00000003029	122 (aa)	-	G3NCH9

Gene Model

Click here to download ENSGACG00000002329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002329	oscp1a	57	31.507	ENSGACG00000003827	si:ch73-14h10.2	77	31.507
ENSGACG00000002329	oscp1a	60	33.333	ENSGACG00000008140	lsm4	51	32.468
ENSGACG00000002329	oscp1a	61	32.432	ENSGACG00000005201	SNRPD1	62	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002329	oscp1a	97	62.712	ENSG00000181817	LSM10	96	62.712	Homo_sapiens
ENSGACG00000002329	oscp1a	97	64.407	ENSAMEG00000019854	LSM10	96	64.407	Ailuropoda_melanoleuca
ENSGACG00000002329	oscp1a	100	84.426	ENSACIG00000015420	oscp1a	81	84.426	Amphilophus_citrinellus
ENSGACG00000002329	oscp1a	89	85.185	ENSAOCG00000015607	LSM10	84	85.185	Amphiprion_ocellaris
ENSGACG00000002329	oscp1a	98	87.500	ENSAOCG00000015618	LSM10	99	87.500	Amphiprion_ocellaris
ENSGACG00000002329	oscp1a	98	87.500	ENSAOCG00000014654	-	99	87.500	Amphiprion_ocellaris
ENSGACG00000002329	oscp1a	89	85.185	ENSAPEG00000021851	LSM10	84	85.185	Amphiprion_percula
ENSGACG00000002329	oscp1a	98	87.500	ENSAPEG00000021845	-	99	87.500	Amphiprion_percula
ENSGACG00000002329	oscp1a	94	89.565	ENSATEG00000006310	oscp1a	85	89.565	Anabas_testudineus
ENSGACG00000002329	oscp1a	95	56.897	ENSACAG00000001231	LSM10	94	56.897	Anolis_carolinensis
ENSGACG00000002329	oscp1a	97	62.712	ENSANAG00000018759	-	96	62.712	Aotus_nancymaae
ENSGACG00000002329	oscp1a	97	61.017	ENSANAG00000031489	-	97	61.017	Aotus_nancymaae
ENSGACG00000002329	oscp1a	100	87.705	ENSACLG00000004728	oscp1a	99	87.705	Astatotilapia_calliptera
ENSGACG00000002329	oscp1a	96	76.068	ENSAMXG00000025301	oscp1a	97	76.068	Astyanax_mexicanus
ENSGACG00000002329	oscp1a	98	63.866	ENSBTAG00000024096	LSM10	98	63.866	Bos_taurus
ENSGACG00000002329	oscp1a	97	63.559	ENSCJAG00000044880	LSM10	96	63.559	Callithrix_jacchus
ENSGACG00000002329	oscp1a	97	65.254	ENSCAFG00000003382	LSM10	96	65.254	Canis_familiaris
ENSGACG00000002329	oscp1a	97	65.254	ENSCAFG00020008920	LSM10	96	65.254	Canis_lupus_dingo
ENSGACG00000002329	oscp1a	98	63.866	ENSCHIG00000009398	LSM10	98	63.866	Capra_hircus
ENSGACG00000002329	oscp1a	97	66.102	ENSCAPG00000012567	LSM10	96	66.102	Cavia_aperea
ENSGACG00000002329	oscp1a	97	66.102	ENSCPOG00000039302	LSM10	96	66.102	Cavia_porcellus
ENSGACG00000002329	oscp1a	97	62.712	ENSCCAG00000018913	-	96	62.712	Cebus_capucinus
ENSGACG00000002329	oscp1a	97	60.169	ENSCCAG00000008378	-	96	60.169	Cebus_capucinus
ENSGACG00000002329	oscp1a	95	62.931	ENSCATG00000006589	LSM10	94	62.931	Cercocebus_atys
ENSGACG00000002329	oscp1a	97	64.407	ENSCLAG00000008633	LSM10	96	64.407	Chinchilla_lanigera
ENSGACG00000002329	oscp1a	95	62.931	ENSCSAG00000000134	LSM10	94	62.931	Chlorocebus_sabaeus
ENSGACG00000002329	oscp1a	97	60.833	ENSCHOG00000008615	LSM10	96	60.833	Choloepus_hoffmanni
ENSGACG00000002329	oscp1a	80	32.990	ENSCSAVG00000001896	-	83	32.990	Ciona_savignyi
ENSGACG00000002329	oscp1a	95	62.931	ENSCANG00000019928	LSM10	94	62.931	Colobus_angolensis_palliatus
ENSGACG00000002329	oscp1a	95	64.655	ENSCGRG00001004317	-	95	64.655	Cricetulus_griseus_chok1gshd
ENSGACG00000002329	oscp1a	93	59.483	ENSCGRG00001022673	-	93	59.483	Cricetulus_griseus_chok1gshd
ENSGACG00000002329	oscp1a	95	64.655	ENSCGRG00000014935	-	95	64.655	Cricetulus_griseus_crigri
ENSGACG00000002329	oscp1a	93	59.483	ENSCGRG00000015514	-	93	59.483	Cricetulus_griseus_crigri
ENSGACG00000002329	oscp1a	98	85.714	ENSCSEG00000010374	oscp1a	80	85.714	Cynoglossus_semilaevis
ENSGACG00000002329	oscp1a	97	80.508	ENSCVAG00000001536	oscp1a	89	80.508	Cyprinodon_variegatus
ENSGACG00000002329	oscp1a	98	73.950	ENSDARG00000101222	oscp1a	98	73.950	Danio_rerio
ENSGACG00000002329	oscp1a	69	73.810	ENSDARG00000109563	CABZ01074453.1	98	73.810	Danio_rerio
ENSGACG00000002329	oscp1a	97	63.559	ENSDNOG00000036662	LSM10	96	63.559	Dasypus_novemcinctus
ENSGACG00000002329	oscp1a	95	65.517	ENSDORG00000007579	Lsm10	94	65.517	Dipodomys_ordii
ENSGACG00000002329	oscp1a	95	63.793	ENSETEG00000005703	LSM10	94	63.793	Echinops_telfairi
ENSGACG00000002329	oscp1a	92	51.786	ENSEBUG00000001312	oscp1a	92	51.786	Eptatretus_burgeri
ENSGACG00000002329	oscp1a	97	64.407	ENSEASG00005012194	LSM10	96	64.407	Equus_asinus_asinus
ENSGACG00000002329	oscp1a	97	64.407	ENSECAG00000005071	LSM10	96	64.407	Equus_caballus
ENSGACG00000002329	oscp1a	97	65.254	ENSEEUG00000012032	LSM10	96	65.254	Erinaceus_europaeus
ENSGACG00000002329	oscp1a	98	83.193	ENSELUG00000007452	oscp1a	98	83.193	Esox_lucius
ENSGACG00000002329	oscp1a	95	61.207	ENSFALG00000000851	LSM10	94	61.207	Ficedula_albicollis
ENSGACG00000002329	oscp1a	97	65.254	ENSFDAG00000021056	LSM10	96	65.254	Fukomys_damarensis
ENSGACG00000002329	oscp1a	93	79.825	ENSFHEG00000001058	oscp1a	98	79.825	Fundulus_heteroclitus
ENSGACG00000002329	oscp1a	98	69.748	ENSGMOG00000019832	oscp1a	100	69.748	Gadus_morhua
ENSGACG00000002329	oscp1a	97	62.712	ENSGALG00000002127	LSM10	96	62.712	Gallus_gallus
ENSGACG00000002329	oscp1a	88	71.963	ENSGAFG00000016445	oscp1a	87	71.963	Gambusia_affinis
ENSGACG00000002329	oscp1a	96	61.538	ENSGAGG00000024848	LSM10	95	61.538	Gopherus_agassizii
ENSGACG00000002329	oscp1a	97	62.712	ENSGGOG00000003556	LSM10	96	62.712	Gorilla_gorilla
ENSGACG00000002329	oscp1a	100	88.525	ENSHBUG00000001722	oscp1a	99	88.525	Haplochromis_burtoni
ENSGACG00000002329	oscp1a	97	63.559	ENSHGLG00000011625	LSM10	96	63.559	Heterocephalus_glaber_female
ENSGACG00000002329	oscp1a	97	63.559	ENSHGLG00100001769	LSM10	96	63.559	Heterocephalus_glaber_male
ENSGACG00000002329	oscp1a	85	75.962	ENSIPUG00000005808	oscp1a	90	75.962	Ictalurus_punctatus
ENSGACG00000002329	oscp1a	97	65.254	ENSSTOG00000000606	LSM10	96	65.254	Ictidomys_tridecemlineatus
ENSGACG00000002329	oscp1a	98	88.333	ENSKMAG00000012143	oscp1a	99	88.333	Kryptolebias_marmoratus
ENSGACG00000002329	oscp1a	93	85.088	ENSLBEG00000017764	oscp1a	93	85.088	Labrus_bergylta
ENSGACG00000002329	oscp1a	95	57.759	ENSLACG00000015904	LSM10	89	57.759	Latimeria_chalumnae
ENSGACG00000002329	oscp1a	98	74.167	ENSLOCG00000018277	oscp1a	98	74.167	Lepisosteus_oculatus
ENSGACG00000002329	oscp1a	95	64.655	ENSLAFG00000009600	LSM10	94	64.655	Loxodonta_africana
ENSGACG00000002329	oscp1a	95	62.931	ENSMFAG00000009115	LSM10	94	62.931	Macaca_fascicularis
ENSGACG00000002329	oscp1a	95	62.931	ENSMMUG00000017338	LSM10	94	62.931	Macaca_mulatta
ENSGACG00000002329	oscp1a	95	62.931	ENSMNEG00000020023	LSM10	94	62.931	Macaca_nemestrina
ENSGACG00000002329	oscp1a	95	62.931	ENSMLEG00000025150	LSM10	94	62.931	Mandrillus_leucophaeus
ENSGACG00000002329	oscp1a	98	88.333	ENSMAMG00000004427	oscp1a	98	88.333	Mastacembelus_armatus
ENSGACG00000002329	oscp1a	100	87.705	ENSMZEG00005026307	oscp1a	99	87.705	Maylandia_zebra
ENSGACG00000002329	oscp1a	97	61.864	ENSMGAG00000015707	LSM10	96	61.864	Meleagris_gallopavo
ENSGACG00000002329	oscp1a	95	65.517	ENSMAUG00000016624	Lsm10	95	65.517	Mesocricetus_auratus
ENSGACG00000002329	oscp1a	95	64.655	ENSMOCG00000021943	Lsm10	95	64.655	Microtus_ochrogaster
ENSGACG00000002329	oscp1a	95	87.931	ENSMMOG00000013597	oscp1a	87	87.931	Mola_mola
ENSGACG00000002329	oscp1a	99	66.393	ENSMODG00000023328	LSM10	99	66.393	Monodelphis_domestica
ENSGACG00000002329	oscp1a	54	87.879	ENSMALG00000012661	oscp1a	52	87.879	Monopterus_albus
ENSGACG00000002329	oscp1a	95	64.655	MGP_CAROLIEiJ_G0026467	Lsm10	96	68.539	Mus_caroli
ENSGACG00000002329	oscp1a	95	64.655	ENSMUSG00000050188	Lsm10	96	68.539	Mus_musculus
ENSGACG00000002329	oscp1a	95	64.655	MGP_PahariEiJ_G0028798	Lsm10	96	68.539	Mus_pahari
ENSGACG00000002329	oscp1a	95	64.655	MGP_SPRETEiJ_G0027446	Lsm10	96	68.539	Mus_spretus
ENSGACG00000002329	oscp1a	97	65.254	ENSMPUG00000018593	LSM10	96	65.254	Mustela_putorius_furo
ENSGACG00000002329	oscp1a	97	64.407	ENSMLUG00000023895	LSM10	96	64.407	Myotis_lucifugus
ENSGACG00000002329	oscp1a	95	63.793	ENSNGAG00000015011	Lsm10	94	63.793	Nannospalax_galili
ENSGACG00000002329	oscp1a	100	87.705	ENSNBRG00000014306	oscp1a	99	87.705	Neolamprologus_brichardi
ENSGACG00000002329	oscp1a	97	63.559	ENSNLEG00000033754	LSM10	96	63.559	Nomascus_leucogenys
ENSGACG00000002329	oscp1a	98	65.546	ENSMEUG00000006313	LSM10	97	65.546	Notamacropus_eugenii
ENSGACG00000002329	oscp1a	95	63.793	ENSOPRG00000001699	LSM10	94	63.793	Ochotona_princeps
ENSGACG00000002329	oscp1a	97	64.407	ENSODEG00000019161	LSM10	96	64.407	Octodon_degus
ENSGACG00000002329	oscp1a	100	87.705	ENSONIG00000020904	oscp1a	100	87.705	Oreochromis_niloticus
ENSGACG00000002329	oscp1a	98	64.706	ENSOANG00000002066	LSM10	97	64.706	Ornithorhynchus_anatinus
ENSGACG00000002329	oscp1a	97	62.712	ENSOCUG00000005333	LSM10	96	62.712	Oryctolagus_cuniculus
ENSGACG00000002329	oscp1a	98	81.667	ENSORLG00000009504	oscp1a	99	81.667	Oryzias_latipes
ENSGACG00000002329	oscp1a	98	81.667	ENSORLG00020016201	oscp1a	99	81.667	Oryzias_latipes_hni
ENSGACG00000002329	oscp1a	98	80.833	ENSORLG00015007794	oscp1a	99	80.833	Oryzias_latipes_hsok
ENSGACG00000002329	oscp1a	97	65.254	ENSOGAG00000002653	LSM10	96	65.254	Otolemur_garnettii
ENSGACG00000002329	oscp1a	98	63.866	ENSOARG00000009596	LSM10	98	63.866	Ovis_aries
ENSGACG00000002329	oscp1a	97	62.712	ENSPPAG00000023465	LSM10	96	62.712	Pan_paniscus
ENSGACG00000002329	oscp1a	97	64.407	ENSPPRG00000014619	LSM10	96	64.407	Panthera_pardus
ENSGACG00000002329	oscp1a	97	64.407	ENSPTIG00000004613	LSM10	96	64.407	Panthera_tigris_altaica
ENSGACG00000002329	oscp1a	97	62.712	ENSPTRG00000000539	LSM10	96	62.712	Pan_troglodytes
ENSGACG00000002329	oscp1a	95	62.931	ENSPANG00000023172	LSM10	94	62.931	Papio_anubis
ENSGACG00000002329	oscp1a	98	76.667	ENSPKIG00000003728	oscp1a	97	76.667	Paramormyrops_kingsleyae
ENSGACG00000002329	oscp1a	96	60.684	ENSPSIG00000000590	LSM10	95	60.684	Pelodiscus_sinensis
ENSGACG00000002329	oscp1a	63	77.922	ENSPMGG00000015718	oscp1a	100	77.922	Periophthalmus_magnuspinnatus
ENSGACG00000002329	oscp1a	84	67.647	ENSPCIG00000014865	LSM10	75	67.647	Phascolarctos_cinereus
ENSGACG00000002329	oscp1a	93	75.439	ENSPFOG00000020490	oscp1a	97	75.439	Poecilia_formosa
ENSGACG00000002329	oscp1a	100	71.311	ENSPLAG00000016537	oscp1a	93	71.311	Poecilia_latipinna
ENSGACG00000002329	oscp1a	93	73.451	ENSPMEG00000000174	oscp1a	98	73.451	Poecilia_mexicana
ENSGACG00000002329	oscp1a	100	72.131	ENSPREG00000009899	oscp1a	93	72.131	Poecilia_reticulata
ENSGACG00000002329	oscp1a	97	62.712	ENSPPYG00000001539	LSM10	96	62.712	Pongo_abelii
ENSGACG00000002329	oscp1a	97	64.407	ENSPCAG00000002520	LSM10	97	64.407	Procavia_capensis
ENSGACG00000002329	oscp1a	97	65.254	ENSPVAG00000008644	LSM10	96	65.254	Pteropus_vampyrus
ENSGACG00000002329	oscp1a	100	88.525	ENSPNYG00000003138	oscp1a	99	88.525	Pundamilia_nyererei
ENSGACG00000002329	oscp1a	98	80.672	ENSPNAG00000028829	oscp1a	98	80.672	Pygocentrus_nattereri
ENSGACG00000002329	oscp1a	95	63.793	ENSRNOG00000025716	Lsm10	95	63.793	Rattus_norvegicus
ENSGACG00000002329	oscp1a	95	62.931	ENSRBIG00000001561	LSM10	94	62.931	Rhinopithecus_bieti
ENSGACG00000002329	oscp1a	95	62.931	ENSRROG00000011414	LSM10	94	62.931	Rhinopithecus_roxellana
ENSGACG00000002329	oscp1a	97	62.712	ENSSBOG00000036413	-	96	62.712	Saimiri_boliviensis_boliviensis
ENSGACG00000002329	oscp1a	98	65.546	ENSSHAG00000018056	LSM10	97	65.546	Sarcophilus_harrisii
ENSGACG00000002329	oscp1a	98	72.269	ENSSFOG00015019954	lsm10	98	72.269	Scleropages_formosus
ENSGACG00000002329	oscp1a	96	93.162	ENSSMAG00000001297	oscp1a	100	93.162	Scophthalmus_maximus
ENSGACG00000002329	oscp1a	98	82.353	ENSSDUG00000007090	oscp1a	97	82.353	Seriola_dumerili
ENSGACG00000002329	oscp1a	98	80.833	ENSSLDG00000000800	oscp1a	99	80.833	Seriola_lalandi_dorsalis
ENSGACG00000002329	oscp1a	86	67.619	ENSSARG00000004211	LSM10	96	63.333	Sorex_araneus
ENSGACG00000002329	oscp1a	96	90.598	ENSSPAG00000009229	oscp1a	97	90.598	Stegastes_partitus
ENSGACG00000002329	oscp1a	97	63.559	ENSSSCG00000038916	LSM10	96	63.559	Sus_scrofa
ENSGACG00000002329	oscp1a	96	60.684	ENSTGUG00000001600	-	96	60.684	Taeniopygia_guttata
ENSGACG00000002329	oscp1a	96	61.538	ENSTGUG00000001602	-	96	61.538	Taeniopygia_guttata
ENSGACG00000002329	oscp1a	98	79.832	ENSTRUG00000010531	oscp1a	96	79.832	Takifugu_rubripes
ENSGACG00000002329	oscp1a	96	63.248	ENSTBEG00000016674	LSM10	95	63.248	Tupaia_belangeri
ENSGACG00000002329	oscp1a	97	64.407	ENSUAMG00000020265	LSM10	96	64.407	Ursus_americanus
ENSGACG00000002329	oscp1a	97	64.407	ENSUMAG00000001438	LSM10	54	64.407	Ursus_maritimus
ENSGACG00000002329	oscp1a	97	65.254	ENSVVUG00000023209	LSM10	96	65.254	Vulpes_vulpes
ENSGACG00000002329	oscp1a	98	60.504	ENSXETG00000027631	lsm10	97	60.504	Xenopus_tropicalis
ENSGACG00000002329	oscp1a	98	71.667	ENSXCOG00000018776	oscp1a	75	71.667	Xiphophorus_couchianus
ENSGACG00000002329	oscp1a	92	75.000	ENSXMAG00000019963	oscp1a	90	75.000	Xiphophorus_maculatus