EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002389 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4280 bases
Position: chrgroupX:2034216-2038495
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003112	RRM_1	PF00076.22	3.7e-31	1	2
ENSGACP00000003112	RRM_1	PF00076.22	3.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003123	-	960	-	ENSGACP00000003112	320 (aa)	-	G3NCR2

Gene Model

Click here to download ENSGACG00000002389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002389	srsf4	54	41.753	ENSGACG00000016921	srsf9	74	42.268
ENSGACG00000002389	srsf4	53	34.286	ENSGACG00000019028	rbm14b	64	34.286
ENSGACG00000002389	srsf4	53	44.000	ENSGACG00000011094	-	90	45.977
ENSGACG00000002389	srsf4	55	73.370	ENSGACG00000006084	srsf6a	51	73.514
ENSGACG00000002389	srsf4	54	58.201	ENSGACG00000011761	srsf5a	69	64.943
ENSGACG00000002389	srsf4	61	37.681	ENSGACG00000020621	srsf1b	78	38.889
ENSGACG00000002389	srsf4	54	46.473	ENSGACG00000007834	srsf5b	83	59.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002389	srsf4	73	69.421	ENSG00000116350	SRSF4	56	84.000	Homo_sapiens
ENSGACG00000002389	srsf4	88	56.643	ENSAPOG00000023399	-	60	74.860	Acanthochromis_polyacanthus
ENSGACG00000002389	srsf4	56	92.179	ENSACIG00000018649	srsf4	90	92.623	Amphilophus_citrinellus
ENSGACG00000002389	srsf4	51	90.123	ENSAOCG00000005997	srsf4	92	93.210	Amphiprion_ocellaris
ENSGACG00000002389	srsf4	73	79.253	ENSATEG00000005680	srsf4	60	91.713	Anabas_testudineus
ENSGACG00000002389	srsf4	55	75.824	ENSACLG00000021269	-	51	76.630	Astatotilapia_calliptera
ENSGACG00000002389	srsf4	56	92.222	ENSACLG00000003395	srsf4	64	98.718	Astatotilapia_calliptera
ENSGACG00000002389	srsf4	56	89.944	ENSAMXG00000034811	srsf4	76	92.308	Astyanax_mexicanus
ENSGACG00000002389	srsf4	54	49.749	WBGene00004698	rsp-1	97	51.724	Caenorhabditis_elegans
ENSGACG00000002389	srsf4	82	71.374	ENSCHIG00000022096	SRSF4	51	79.327	Capra_hircus
ENSGACG00000002389	srsf4	54	59.140	ENSCING00000011362	-	65	59.459	Ciona_intestinalis
ENSGACG00000002389	srsf4	55	58.081	ENSCING00000020631	-	80	60.000	Ciona_intestinalis
ENSGACG00000002389	srsf4	55	61.111	ENSCING00000012370	-	68	62.500	Ciona_intestinalis
ENSGACG00000002389	srsf4	54	55.729	ENSCING00000024718	-	57	57.949	Ciona_intestinalis
ENSGACG00000002389	srsf4	54	66.102	ENSCSAVG00000002581	-	70	63.536	Ciona_savignyi
ENSGACG00000002389	srsf4	56	86.264	ENSDARG00000105293	srsf4	90	80.000	Danio_rerio
ENSGACG00000002389	srsf4	54	64.481	FBgn0004587	B52	95	59.375	Drosophila_melanogaster
ENSGACG00000002389	srsf4	55	61.453	ENSEBUG00000001681	srsf4	67	61.453	Eptatretus_burgeri
ENSGACG00000002389	srsf4	56	76.804	ENSELUG00000017551	srsf4	95	75.000	Esox_lucius
ENSGACG00000002389	srsf4	56	92.778	ENSFHEG00000007472	srsf4	84	100.000	Fundulus_heteroclitus
ENSGACG00000002389	srsf4	88	72.917	ENSGMOG00000012906	srsf4	57	93.296	Gadus_morhua
ENSGACG00000002389	srsf4	56	93.333	ENSGAFG00000018496	srsf4	53	95.588	Gambusia_affinis
ENSGACG00000002389	srsf4	55	75.824	ENSHBUG00000011326	-	51	76.630	Haplochromis_burtoni
ENSGACG00000002389	srsf4	57	98.485	ENSHCOG00000012540	srsf4	68	91.892	Hippocampus_comes
ENSGACG00000002389	srsf4	63	88.406	ENSKMAG00000013631	srsf4	82	79.808	Kryptolebias_marmoratus
ENSGACG00000002389	srsf4	55	74.033	ENSLOCG00000001442	-	50	77.596	Lepisosteus_oculatus
ENSGACG00000002389	srsf4	86	78.467	ENSMAMG00000004888	srsf4	70	94.215	Mastacembelus_armatus
ENSGACG00000002389	srsf4	56	92.222	ENSMZEG00005026275	srsf4	64	98.718	Maylandia_zebra
ENSGACG00000002389	srsf4	100	75.938	ENSMMOG00000013653	srsf4	66	90.503	Mola_mola
ENSGACG00000002389	srsf4	55	84.746	ENSMODG00000011052	SRSF4	56	84.358	Monodelphis_domestica
ENSGACG00000002389	srsf4	56	94.475	ENSMALG00000013392	srsf4	66	93.855	Monopterus_albus
ENSGACG00000002389	srsf4	55	69.780	ENSNLEG00000030787	-	56	69.444	Nomascus_leucogenys
ENSGACG00000002389	srsf4	56	91.667	ENSORLG00020016052	srsf4	66	93.889	Oryzias_latipes_hni
ENSGACG00000002389	srsf4	81	78.161	ENSORLG00015007566	srsf4	71	93.889	Oryzias_latipes_hsok
ENSGACG00000002389	srsf4	56	91.667	ENSOMEG00000005541	srsf4	51	93.889	Oryzias_melastigma
ENSGACG00000002389	srsf4	55	63.536	ENSPMAG00000009397	srsf4	68	63.978	Petromyzon_marinus
ENSGACG00000002389	srsf4	56	93.333	ENSPLAG00000008812	srsf4	65	81.967	Poecilia_latipinna
ENSGACG00000002389	srsf4	56	89.840	ENSPMEG00000023638	srsf4	53	91.803	Poecilia_mexicana
ENSGACG00000002389	srsf4	56	93.333	ENSPREG00000009639	srsf4	51	93.333	Poecilia_reticulata
ENSGACG00000002389	srsf4	56	89.560	ENSPNYG00000003796	srsf4	56	93.407	Pundamilia_nyererei
ENSGACG00000002389	srsf4	55	91.429	ENSPNAG00000023844	srsf4	54	91.061	Pygocentrus_nattereri
ENSGACG00000002389	srsf4	55	92.045	ENSSFOG00015020292	srsf4	82	87.640	Scleropages_formosus
ENSGACG00000002389	srsf4	56	92.432	ENSSMAG00000001707	srsf4	57	82.143	Scophthalmus_maximus
ENSGACG00000002389	srsf4	56	94.413	ENSSDUG00000007387	srsf4	54	95.531	Seriola_dumerili
ENSGACG00000002389	srsf4	56	82.778	ENSSLDG00000009745	srsf4	62	82.682	Seriola_lalandi_dorsalis
ENSGACG00000002389	srsf4	85	81.022	ENSSPAG00000014538	srsf4	83	93.388	Stegastes_partitus
ENSGACG00000002389	srsf4	83	79.623	ENSTRUG00000011891	srsf4	63	88.601	Takifugu_rubripes
ENSGACG00000002389	srsf4	98	60.961	ENSXCOG00000018826	srsf4	89	88.983	Xiphophorus_couchianus
ENSGACG00000002389	srsf4	55	66.667	ENSXCOG00000003212	-	55	72.872	Xiphophorus_couchianus