EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002413 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4193 bases
Position: chrgroupX:2048132-2052324
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003152	DEAD	PF00270.29	5.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003163	-	1449	-	ENSGACP00000003152	483 (aa)	-	G3NCV2

Gene Model

Click here to download ENSGACG00000002413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002413	-	77	38.441	ENSGACG00000020072	eif4a1b	95	38.441
ENSGACG00000002413	-	98	81.042	ENSGACG00000012258	ddx6	99	81.497
ENSGACG00000002413	-	66	31.420	ENSGACG00000001563	ddx18	56	31.420
ENSGACG00000002413	-	82	36.250	ENSGACG00000019335	ddx39aa	93	35.840
ENSGACG00000002413	-	76	31.467	ENSGACG00000008047	ddx49	87	31.135
ENSGACG00000002413	-	68	31.250	ENSGACG00000015591	ddx55	57	31.250
ENSGACG00000002413	-	82	36.842	ENSGACG00000006096	DDX39A	93	36.842
ENSGACG00000002413	-	99	85.421	ENSGACG00000003401	ddx61	100	85.010
ENSGACG00000002413	-	78	36.939	ENSGACG00000020004	eif4a3	93	37.234
ENSGACG00000002413	-	70	40.678	ENSGACG00000011162	ddx1	54	40.678
ENSGACG00000002413	-	72	35.068	ENSGACG00000011283	zgc:193690	74	35.068
ENSGACG00000002413	-	72	36.438	ENSGACG00000007778	ddx19	73	36.438
ENSGACG00000002413	-	78	31.358	ENSGACG00000018334	DDX41	57	31.944
ENSGACG00000002413	-	77	31.325	ENSGACG00000003024	ddx23	69	31.325
ENSGACG00000002413	-	77	39.516	ENSGACG00000016054	eif4a2	91	39.516
ENSGACG00000002413	-	72	32.584	ENSGACG00000012072	ddx43	70	32.584
ENSGACG00000002413	-	75	32.514	ENSGACG00000007092	ddx47	78	32.514
ENSGACG00000002413	-	71	31.302	ENSGACG00000015323	ddx4	73	31.302
ENSGACG00000002413	-	72	31.373	ENSGACG00000007026	ddx5	57	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002413	-	76	97.019	ENSAPOG00000023627	-	93	97.019	Acanthochromis_polyacanthus
ENSGACG00000002413	-	99	86.221	ENSAPOG00000014829	ddx61	98	86.221	Acanthochromis_polyacanthus
ENSGACG00000002413	-	99	87.967	ENSACIG00000018355	-	99	87.967	Amphilophus_citrinellus
ENSGACG00000002413	-	99	87.265	ENSAOCG00000007627	ddx61	98	87.265	Amphiprion_ocellaris
ENSGACG00000002413	-	100	95.031	ENSAOCG00000006269	-	99	95.031	Amphiprion_ocellaris
ENSGACG00000002413	-	99	87.265	ENSAPEG00000007293	ddx61	98	87.265	Amphiprion_percula
ENSGACG00000002413	-	100	95.031	ENSAPEG00000020642	-	99	95.031	Amphiprion_percula
ENSGACG00000002413	-	100	95.031	ENSAPEG00000021368	-	99	95.031	Amphiprion_percula
ENSGACG00000002413	-	98	87.342	ENSATEG00000011302	ddx61	99	86.681	Anabas_testudineus
ENSGACG00000002413	-	100	93.582	ENSATEG00000005424	-	99	93.582	Anabas_testudineus
ENSGACG00000002413	-	99	94.813	ENSACLG00000003260	-	99	94.813	Astatotilapia_calliptera
ENSGACG00000002413	-	99	86.542	ENSACLG00000027620	ddx61	99	86.335	Astatotilapia_calliptera
ENSGACG00000002413	-	98	85.535	ENSAMXG00000032542	ddx61	99	84.600	Astyanax_mexicanus
ENSGACG00000002413	-	99	87.243	ENSAMXG00000033980	-	98	87.243	Astyanax_mexicanus
ENSGACG00000002413	-	99	95.228	ENSCSEG00000009893	-	98	95.228	Cynoglossus_semilaevis
ENSGACG00000002413	-	100	91.718	ENSCVAG00000011006	-	99	91.718	Cyprinodon_variegatus
ENSGACG00000002413	-	98	84.696	ENSDARG00000018425	ddx61	98	84.906	Danio_rerio
ENSGACG00000002413	-	99	90.456	ENSELUG00000022538	-	98	89.813	Esox_lucius
ENSGACG00000002413	-	99	88.406	ENSELUG00000020545	ddx61	99	88.406	Esox_lucius
ENSGACG00000002413	-	100	91.097	ENSFHEG00000015487	-	99	91.097	Fundulus_heteroclitus
ENSGACG00000002413	-	67	87.768	ENSGMOG00000003561	-	100	87.768	Gadus_morhua
ENSGACG00000002413	-	97	87.395	ENSGMOG00000013762	ddx61	99	86.071	Gadus_morhua
ENSGACG00000002413	-	100	90.289	ENSGAFG00000015865	-	99	90.289	Gambusia_affinis
ENSGACG00000002413	-	99	86.749	ENSHBUG00000017832	ddx61	99	86.542	Haplochromis_burtoni
ENSGACG00000002413	-	99	94.813	ENSHBUG00000017033	-	99	94.813	Haplochromis_burtoni
ENSGACG00000002413	-	98	83.824	ENSHCOG00000008184	ddx61	97	83.193	Hippocampus_comes
ENSGACG00000002413	-	99	90.249	ENSHCOG00000012238	-	98	90.249	Hippocampus_comes
ENSGACG00000002413	-	97	84.435	ENSIPUG00000012823	DDX6	99	82.988	Ictalurus_punctatus
ENSGACG00000002413	-	97	87.975	ENSIPUG00000008367	-	100	86.626	Ictalurus_punctatus
ENSGACG00000002413	-	99	93.568	ENSKMAG00000007213	-	99	93.568	Kryptolebias_marmoratus
ENSGACG00000002413	-	98	86.737	ENSLBEG00000001740	ddx61	98	86.737	Labrus_bergylta
ENSGACG00000002413	-	100	94.898	ENSLBEG00000016890	-	99	94.898	Labrus_bergylta
ENSGACG00000002413	-	99	82.851	ENSLACG00000015214	ddx61	100	81.988	Latimeria_chalumnae
ENSGACG00000002413	-	97	47.872	ENSLOCG00000004352	ddx61	94	47.650	Lepisosteus_oculatus
ENSGACG00000002413	-	100	94.835	ENSMAMG00000005559	-	99	94.835	Mastacembelus_armatus
ENSGACG00000002413	-	98	87.185	ENSMAMG00000005321	ddx61	97	87.185	Mastacembelus_armatus
ENSGACG00000002413	-	99	86.749	ENSMZEG00005003556	ddx61	99	86.542	Maylandia_zebra
ENSGACG00000002413	-	99	94.813	ENSMZEG00005026268	-	99	94.813	Maylandia_zebra
ENSGACG00000002413	-	97	86.567	ENSMMOG00000007415	ddx61	97	86.383	Mola_mola
ENSGACG00000002413	-	73	76.554	ENSMMOG00000008825	-	98	71.388	Mola_mola
ENSGACG00000002413	-	100	84.679	ENSMMOG00000013694	-	98	85.093	Mola_mola
ENSGACG00000002413	-	100	93.168	ENSMALG00000013817	-	99	93.168	Monopterus_albus
ENSGACG00000002413	-	98	75.884	ENSMALG00000013776	ddx61	96	75.417	Monopterus_albus
ENSGACG00000002413	-	99	88.174	ENSNBRG00000015075	-	99	88.174	Neolamprologus_brichardi
ENSGACG00000002413	-	99	79.958	ENSNBRG00000015800	ddx61	99	79.749	Neolamprologus_brichardi
ENSGACG00000002413	-	99	86.848	ENSONIG00000011418	ddx61	99	86.639	Oreochromis_niloticus
ENSGACG00000002413	-	99	95.021	ENSONIG00000013748	-	99	95.021	Oreochromis_niloticus
ENSGACG00000002413	-	99	92.324	ENSORLG00000009178	-	99	92.324	Oryzias_latipes
ENSGACG00000002413	-	99	92.324	ENSORLG00020015515	-	99	92.324	Oryzias_latipes_hni
ENSGACG00000002413	-	99	92.324	ENSORLG00015006764	-	99	92.324	Oryzias_latipes_hsok
ENSGACG00000002413	-	98	83.721	ENSOMEG00000022326	-	99	84.144	Oryzias_melastigma
ENSGACG00000002413	-	98	89.518	ENSPKIG00000024264	ddx61	98	89.004	Paramormyrops_kingsleyae
ENSGACG00000002413	-	99	82.851	ENSPMGG00000013355	-	99	82.645	Periophthalmus_magnuspinnatus
ENSGACG00000002413	-	100	91.097	ENSPFOG00000005750	-	99	91.097	Poecilia_formosa
ENSGACG00000002413	-	100	91.097	ENSPLAG00000000403	-	99	91.097	Poecilia_latipinna
ENSGACG00000002413	-	100	90.476	ENSPMEG00000023737	-	99	90.476	Poecilia_mexicana
ENSGACG00000002413	-	99	80.577	ENSPNYG00000015045	ddx61	99	80.385	Pundamilia_nyererei
ENSGACG00000002413	-	99	94.813	ENSPNYG00000003986	-	99	94.813	Pundamilia_nyererei
ENSGACG00000002413	-	99	85.655	ENSPNAG00000024072	ddx61	99	83.778	Pygocentrus_nattereri
ENSGACG00000002413	-	99	88.866	ENSPNAG00000008742	-	98	88.247	Pygocentrus_nattereri
ENSGACG00000002413	-	97	88.445	ENSSFOG00015021404	ddx61	98	86.653	Scleropages_formosus
ENSGACG00000002413	-	97	87.447	ENSSMAG00000006591	ddx61	97	86.316	Scophthalmus_maximus
ENSGACG00000002413	-	100	93.168	ENSSMAG00000001793	-	99	93.168	Scophthalmus_maximus
ENSGACG00000002413	-	97	88.511	ENSSDUG00000009713	ddx61	99	86.957	Seriola_dumerili
ENSGACG00000002413	-	100	95.868	ENSSDUG00000007530	-	99	95.868	Seriola_dumerili
ENSGACG00000002413	-	100	95.868	ENSSLDG00000007608	-	99	95.868	Seriola_lalandi_dorsalis
ENSGACG00000002413	-	97	88.511	ENSSLDG00000000132	ddx61	97	87.815	Seriola_lalandi_dorsalis
ENSGACG00000002413	-	100	95.859	ENSSPAG00000013878	-	99	95.859	Stegastes_partitus
ENSGACG00000002413	-	97	88.486	ENSSPAG00000001578	ddx61	98	87.448	Stegastes_partitus
ENSGACG00000002413	-	100	92.133	ENSTRUG00000012432	-	99	92.133	Takifugu_rubripes
ENSGACG00000002413	-	99	91.892	ENSTNIG00000003560	-	100	91.892	Tetraodon_nigroviridis
ENSGACG00000002413	-	100	80.785	ENSXCOG00000001406	-	98	81.198	Xiphophorus_couchianus
ENSGACG00000002413	-	100	90.496	ENSXMAG00000016090	-	99	90.496	Xiphophorus_maculatus