EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002472 (Gene tree)
Gene ID: -
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP 40 subunit
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9024 bases
Position: chrscaffold_161:49297-58320
Accession: ZDB-GENE-040625-161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003244	Ribonuc_P_40	PF08584.11	1.1e-82	1	1
ENSGACP00000003250	Ribonuc_P_40	PF08584.11	4.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003255	-	1597	-	ENSGACP00000003244	352 (aa)	-	G3ND44
ENSGACT00000003261	-	816	-	ENSGACP00000003250	271 (aa)	-	G3ND50

Gene Model

Click here to download ENSGACG00000002472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002472	rpp40	99	38.655	ENSG00000124787	RPP40	98	39.262	Homo_sapiens
ENSGACG00000002472	rpp40	100	62.500	ENSAPOG00000008660	rpp40	92	59.236	Acanthochromis_polyacanthus
ENSGACG00000002472	rpp40	99	39.496	ENSAMEG00000012938	RPP40	98	39.496	Ailuropoda_melanoleuca
ENSGACG00000002472	rpp40	99	66.857	ENSACIG00000003617	rpp40	99	66.857	Amphilophus_citrinellus
ENSGACG00000002472	rpp40	100	72.521	ENSAOCG00000011846	rpp40	100	72.521	Amphiprion_ocellaris
ENSGACG00000002472	rpp40	100	72.521	ENSAPEG00000001322	rpp40	100	72.521	Amphiprion_percula
ENSGACG00000002472	rpp40	100	70.423	ENSATEG00000006584	rpp40	100	70.704	Anabas_testudineus
ENSGACG00000002472	rpp40	98	36.242	ENSAPLG00000005691	RPP40	98	40.268	Anas_platyrhynchos
ENSGACG00000002472	rpp40	99	39.326	ENSACAG00000006550	RPP40	87	39.326	Anolis_carolinensis
ENSGACG00000002472	rpp40	99	36.695	ENSANAG00000029246	RPP40	98	36.695	Aotus_nancymaae
ENSGACG00000002472	rpp40	98	70.029	ENSACLG00000015883	rpp40	96	70.029	Astatotilapia_calliptera
ENSGACG00000002472	rpp40	100	48.459	ENSAMXG00000001755	rpp40	100	48.459	Astyanax_mexicanus
ENSGACG00000002472	rpp40	99	40.336	ENSBTAG00000003332	RPP40	98	40.336	Bos_taurus
ENSGACG00000002472	rpp40	99	38.095	ENSCJAG00000021373	RPP40	98	38.095	Callithrix_jacchus
ENSGACG00000002472	rpp40	99	39.216	ENSCAFG00000009435	RPP40	98	39.216	Canis_familiaris
ENSGACG00000002472	rpp40	99	39.216	ENSCAFG00020013380	RPP40	98	39.216	Canis_lupus_dingo
ENSGACG00000002472	rpp40	99	38.764	ENSCHIG00000016849	RPP40	98	38.764	Capra_hircus
ENSGACG00000002472	rpp40	99	37.535	ENSTSYG00000032857	RPP40	98	37.584	Carlito_syrichta
ENSGACG00000002472	rpp40	98	34.286	ENSCAPG00000004957	RPP40	97	35.494	Cavia_aperea
ENSGACG00000002472	rpp40	99	39.216	ENSCPOG00000005855	RPP40	98	39.216	Cavia_porcellus
ENSGACG00000002472	rpp40	99	38.095	ENSCCAG00000019809	RPP40	98	38.095	Cebus_capucinus
ENSGACG00000002472	rpp40	99	37.815	ENSCATG00000038787	RPP40	98	37.815	Cercocebus_atys
ENSGACG00000002472	rpp40	99	39.216	ENSCLAG00000003235	RPP40	98	39.216	Chinchilla_lanigera
ENSGACG00000002472	rpp40	99	37.535	ENSCSAG00000007307	RPP40	98	37.535	Chlorocebus_sabaeus
ENSGACG00000002472	rpp40	70	40.833	ENSCHOG00000005856	-	76	40.833	Choloepus_hoffmanni
ENSGACG00000002472	rpp40	99	39.216	ENSCPBG00000009003	RPP40	98	39.216	Chrysemys_picta_bellii
ENSGACG00000002472	rpp40	99	37.815	ENSCANG00000033965	RPP40	98	37.815	Colobus_angolensis_palliatus
ENSGACG00000002472	rpp40	98	37.960	ENSCGRG00001018328	Rpp40	97	37.960	Cricetulus_griseus_chok1gshd
ENSGACG00000002472	rpp40	98	37.960	ENSCGRG00000011344	Rpp40	97	37.960	Cricetulus_griseus_crigri
ENSGACG00000002472	rpp40	100	58.192	ENSCSEG00000015006	-	100	58.192	Cynoglossus_semilaevis
ENSGACG00000002472	rpp40	76	61.722	ENSCVAG00000012169	rpp40	100	57.358	Cyprinodon_variegatus
ENSGACG00000002472	rpp40	100	50.416	ENSDARG00000017605	rpp40	100	50.416	Danio_rerio
ENSGACG00000002472	rpp40	79	39.721	ENSDNOG00000048136	RPP40	96	39.721	Dasypus_novemcinctus
ENSGACG00000002472	rpp40	99	38.936	ENSDORG00000029944	-	98	38.936	Dipodomys_ordii
ENSGACG00000002472	rpp40	99	31.868	ENSDORG00000011196	-	98	31.593	Dipodomys_ordii
ENSGACG00000002472	rpp40	99	32.584	ENSETEG00000007458	RPP40	98	32.584	Echinops_telfairi
ENSGACG00000002472	rpp40	98	38.028	ENSEBUG00000000386	rpp40	99	38.629	Eptatretus_burgeri
ENSGACG00000002472	rpp40	99	40.056	ENSEASG00005012116	RPP40	79	40.056	Equus_asinus_asinus
ENSGACG00000002472	rpp40	99	40.056	ENSECAG00000017247	RPP40	79	40.056	Equus_caballus
ENSGACG00000002472	rpp40	79	32.517	ENSEEUG00000012087	RPP40	97	32.517	Erinaceus_europaeus
ENSGACG00000002472	rpp40	100	51.247	ENSELUG00000017004	rpp40	100	51.247	Esox_lucius
ENSGACG00000002472	rpp40	99	38.655	ENSFCAG00000009249	RPP40	98	38.655	Felis_catus
ENSGACG00000002472	rpp40	98	35.897	ENSFALG00000013166	RPP40	99	38.769	Ficedula_albicollis
ENSGACG00000002472	rpp40	80	32.639	ENSFDAG00000000265	-	99	32.639	Fukomys_damarensis
ENSGACG00000002472	rpp40	99	38.936	ENSFDAG00000013001	-	98	38.936	Fukomys_damarensis
ENSGACG00000002472	rpp40	100	69.405	ENSFHEG00000021429	rpp40	89	69.405	Fundulus_heteroclitus
ENSGACG00000002472	rpp40	100	39.322	ENSGMOG00000018653	rpp40	100	44.025	Gadus_morhua
ENSGACG00000002472	rpp40	99	38.489	ENSGALG00000036074	RPP40	98	38.310	Gallus_gallus
ENSGACG00000002472	rpp40	100	49.833	ENSGAFG00000004189	-	100	55.853	Gambusia_affinis
ENSGACG00000002472	rpp40	99	39.496	ENSGAGG00000012918	RPP40	98	39.496	Gopherus_agassizii
ENSGACG00000002472	rpp40	99	38.375	ENSGGOG00000013764	RPP40	98	38.375	Gorilla_gorilla
ENSGACG00000002472	rpp40	100	60.678	ENSHBUG00000009378	rpp40	96	65.854	Haplochromis_burtoni
ENSGACG00000002472	rpp40	99	39.216	ENSHGLG00000004871	RPP40	98	39.216	Heterocephalus_glaber_female
ENSGACG00000002472	rpp40	99	39.216	ENSHGLG00100002080	RPP40	98	39.216	Heterocephalus_glaber_male
ENSGACG00000002472	rpp40	97	50.000	ENSHCOG00000013264	-	94	50.000	Hippocampus_comes
ENSGACG00000002472	rpp40	100	48.747	ENSIPUG00000008951	RPP40	100	48.747	Ictalurus_punctatus
ENSGACG00000002472	rpp40	99	39.776	ENSSTOG00000011199	RPP40	98	39.776	Ictidomys_tridecemlineatus
ENSGACG00000002472	rpp40	99	39.607	ENSJJAG00000020629	Rpp40	98	39.607	Jaculus_jaculus
ENSGACG00000002472	rpp40	100	71.671	ENSKMAG00000019358	rpp40	100	71.671	Kryptolebias_marmoratus
ENSGACG00000002472	rpp40	100	77.119	ENSLBEG00000022724	rpp40	100	77.119	Labrus_bergylta
ENSGACG00000002472	rpp40	100	40.997	ENSLACG00000014848	RPP40	100	41.274	Latimeria_chalumnae
ENSGACG00000002472	rpp40	100	45.152	ENSLOCG00000011650	rpp40	99	45.152	Lepisosteus_oculatus
ENSGACG00000002472	rpp40	98	40.000	ENSLAFG00000007530	RPP40	98	41.611	Loxodonta_africana
ENSGACG00000002472	rpp40	99	37.255	ENSMFAG00000043100	RPP40	98	37.255	Macaca_fascicularis
ENSGACG00000002472	rpp40	99	37.255	ENSMMUG00000004966	RPP40	98	37.255	Macaca_mulatta
ENSGACG00000002472	rpp40	99	37.535	ENSMNEG00000041986	RPP40	98	37.919	Macaca_nemestrina
ENSGACG00000002472	rpp40	99	32.773	ENSMLEG00000040851	RPP40	99	40.777	Mandrillus_leucophaeus
ENSGACG00000002472	rpp40	100	78.754	ENSMAMG00000019551	rpp40	99	78.754	Mastacembelus_armatus
ENSGACG00000002472	rpp40	99	70.571	ENSMZEG00005019475	rpp40	99	70.571	Maylandia_zebra
ENSGACG00000002472	rpp40	99	36.213	ENSMGAG00000004009	RPP40	89	40.373	Meleagris_gallopavo
ENSGACG00000002472	rpp40	99	38.655	ENSMAUG00000010268	Rpp40	98	38.655	Mesocricetus_auratus
ENSGACG00000002472	rpp40	99	40.896	ENSMICG00000003297	RPP40	98	36.975	Microcebus_murinus
ENSGACG00000002472	rpp40	99	39.216	ENSMOCG00000000305	Rpp40	98	39.216	Microtus_ochrogaster
ENSGACG00000002472	rpp40	91	75.697	ENSMMOG00000020591	-	100	64.986	Mola_mola
ENSGACG00000002472	rpp40	98	39.548	ENSMODG00000009826	RPP40	97	39.548	Monodelphis_domestica
ENSGACG00000002472	rpp40	100	79.320	ENSMALG00000020133	rpp40	100	79.320	Monopterus_albus
ENSGACG00000002472	rpp40	99	39.776	MGP_CAROLIEiJ_G0018429	Rpp40	98	39.776	Mus_caroli
ENSGACG00000002472	rpp40	99	39.776	ENSMUSG00000021418	Rpp40	98	39.776	Mus_musculus
ENSGACG00000002472	rpp40	99	39.216	MGP_PahariEiJ_G0019497	Rpp40	98	39.216	Mus_pahari
ENSGACG00000002472	rpp40	99	39.776	MGP_SPRETEiJ_G0019309	Rpp40	98	39.776	Mus_spretus
ENSGACG00000002472	rpp40	99	39.776	ENSMPUG00000000530	RPP40	92	39.776	Mustela_putorius_furo
ENSGACG00000002472	rpp40	99	40.616	ENSMLUG00000000501	RPP40	98	40.616	Myotis_lucifugus
ENSGACG00000002472	rpp40	99	39.216	ENSNGAG00000023955	-	98	39.216	Nannospalax_galili
ENSGACG00000002472	rpp40	93	36.310	ENSNGAG00000022529	-	97	36.310	Nannospalax_galili
ENSGACG00000002472	rpp40	100	68.116	ENSNBRG00000017465	rpp40	86	63.323	Neolamprologus_brichardi
ENSGACG00000002472	rpp40	99	38.375	ENSNLEG00000034397	RPP40	98	38.375	Nomascus_leucogenys
ENSGACG00000002472	rpp40	99	35.574	ENSMEUG00000005300	RPP40	98	35.574	Notamacropus_eugenii
ENSGACG00000002472	rpp40	99	37.815	ENSODEG00000018153	-	98	37.815	Octodon_degus
ENSGACG00000002472	rpp40	100	39.058	ENSODEG00000007255	-	99	39.058	Octodon_degus
ENSGACG00000002472	rpp40	98	37.455	ENSODEG00000006170	-	100	34.161	Octodon_degus
ENSGACG00000002472	rpp40	99	69.429	ENSONIG00000014016	rpp40	99	69.231	Oreochromis_niloticus
ENSGACG00000002472	rpp40	98	38.462	ENSOANG00000001200	RPP40	98	42.475	Ornithorhynchus_anatinus
ENSGACG00000002472	rpp40	98	39.718	ENSOCUG00000000354	RPP40	98	39.718	Oryctolagus_cuniculus
ENSGACG00000002472	rpp40	99	65.714	ENSORLG00000008242	-	99	65.714	Oryzias_latipes
ENSGACG00000002472	rpp40	99	66.000	ENSORLG00020013745	-	90	66.000	Oryzias_latipes_hni
ENSGACG00000002472	rpp40	99	66.286	ENSORLG00015000887	-	99	66.286	Oryzias_latipes_hsok
ENSGACG00000002472	rpp40	99	65.143	ENSOMEG00000002747	rpp40	99	65.143	Oryzias_melastigma
ENSGACG00000002472	rpp40	99	40.056	ENSOGAG00000006055	RPP40	98	40.056	Otolemur_garnettii
ENSGACG00000002472	rpp40	98	34.680	ENSOARG00000018783	RPP40	98	39.394	Ovis_aries
ENSGACG00000002472	rpp40	99	38.095	ENSPPAG00000023703	RPP40	98	38.095	Pan_paniscus
ENSGACG00000002472	rpp40	99	38.655	ENSPPRG00000005612	RPP40	98	38.655	Panthera_pardus
ENSGACG00000002472	rpp40	99	36.080	ENSPTIG00000018847	RPP40	98	36.080	Panthera_tigris_altaica
ENSGACG00000002472	rpp40	99	38.095	ENSPTRG00000017690	RPP40	98	38.095	Pan_troglodytes
ENSGACG00000002472	rpp40	99	37.815	ENSPANG00000017865	RPP40	98	37.815	Papio_anubis
ENSGACG00000002472	rpp40	100	44.722	ENSPKIG00000006311	rpp40	100	44.722	Paramormyrops_kingsleyae
ENSGACG00000002472	rpp40	78	37.557	ENSPSIG00000007854	RPP40	99	37.557	Pelodiscus_sinensis
ENSGACG00000002472	rpp40	96	37.037	ENSPEMG00000020809	Rpp40	90	32.635	Peromyscus_maniculatus_bairdii
ENSGACG00000002472	rpp40	89	37.450	ENSPMAG00000008412	rpp40	99	38.686	Petromyzon_marinus
ENSGACG00000002472	rpp40	99	40.336	ENSPCIG00000010682	RPP40	98	40.336	Phascolarctos_cinereus
ENSGACG00000002472	rpp40	100	62.817	ENSPFOG00000011460	rpp40	99	62.817	Poecilia_formosa
ENSGACG00000002472	rpp40	100	62.890	ENSPLAG00000001334	rpp40	100	62.890	Poecilia_latipinna
ENSGACG00000002472	rpp40	100	63.456	ENSPMEG00000007721	rpp40	100	63.456	Poecilia_mexicana
ENSGACG00000002472	rpp40	100	64.589	ENSPREG00000009215	rpp40	100	64.589	Poecilia_reticulata
ENSGACG00000002472	rpp40	99	38.655	ENSPPYG00000016194	RPP40	98	38.655	Pongo_abelii
ENSGACG00000002472	rpp40	51	41.111	ENSPCAG00000002700	-	97	41.111	Procavia_capensis
ENSGACG00000002472	rpp40	99	39.776	ENSPCOG00000003907	RPP40	98	39.776	Propithecus_coquereli
ENSGACG00000002472	rpp40	99	39.496	ENSPVAG00000011325	RPP40	98	39.496	Pteropus_vampyrus
ENSGACG00000002472	rpp40	100	62.199	ENSPNYG00000004432	rpp40	100	65.424	Pundamilia_nyererei
ENSGACG00000002472	rpp40	100	47.645	ENSPNAG00000019125	rpp40	100	47.645	Pygocentrus_nattereri
ENSGACG00000002472	rpp40	99	38.936	ENSRNOG00000016226	Rpp40	98	38.936	Rattus_norvegicus
ENSGACG00000002472	rpp40	99	37.535	ENSRBIG00000035800	RPP40	98	37.919	Rhinopithecus_bieti
ENSGACG00000002472	rpp40	99	37.535	ENSRROG00000039116	RPP40	98	37.535	Rhinopithecus_roxellana
ENSGACG00000002472	rpp40	99	37.815	ENSSBOG00000020297	RPP40	98	37.815	Saimiri_boliviensis_boliviensis
ENSGACG00000002472	rpp40	90	39.286	ENSSHAG00000002102	RPP40	99	40.876	Sarcophilus_harrisii
ENSGACG00000002472	rpp40	100	48.333	ENSSFOG00015001142	rpp40	81	48.333	Scleropages_formosus
ENSGACG00000002472	rpp40	100	78.814	ENSSDUG00000007202	rpp40	100	78.814	Seriola_dumerili
ENSGACG00000002472	rpp40	100	78.249	ENSSLDG00000017563	rpp40	100	78.249	Seriola_lalandi_dorsalis
ENSGACG00000002472	rpp40	97	32.542	ENSSPUG00000018950	-	100	36.271	Sphenodon_punctatus
ENSGACG00000002472	rpp40	99	38.095	ENSSPUG00000017487	-	98	38.095	Sphenodon_punctatus
ENSGACG00000002472	rpp40	100	72.238	ENSSPAG00000022716	rpp40	100	72.238	Stegastes_partitus
ENSGACG00000002472	rpp40	99	41.176	ENSSSCG00000000998	RPP40	98	41.611	Sus_scrofa
ENSGACG00000002472	rpp40	62	44.253	ENSTGUG00000015246	-	98	44.253	Taeniopygia_guttata
ENSGACG00000002472	rpp40	99	41.176	ENSTGUG00000002258	-	99	41.176	Taeniopygia_guttata
ENSGACG00000002472	rpp40	99	73.714	ENSTRUG00000003755	rpp40	99	73.714	Takifugu_rubripes
ENSGACG00000002472	rpp40	100	67.514	ENSTNIG00000003077	rpp40	100	67.514	Tetraodon_nigroviridis
ENSGACG00000002472	rpp40	100	34.903	ENSTTRG00000007319	RPP40	99	34.903	Tursiops_truncatus
ENSGACG00000002472	rpp40	99	38.936	ENSUAMG00000002159	RPP40	98	38.936	Ursus_americanus
ENSGACG00000002472	rpp40	99	38.936	ENSUMAG00000018639	RPP40	92	38.936	Ursus_maritimus
ENSGACG00000002472	rpp40	99	39.216	ENSVVUG00000005451	RPP40	98	39.216	Vulpes_vulpes
ENSGACG00000002472	rpp40	100	39.612	ENSXETG00000017617	rpp40	100	39.612	Xenopus_tropicalis
ENSGACG00000002472	rpp40	100	48.056	ENSXMAG00000024940	rpp40	99	48.611	Xiphophorus_maculatus