EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002496 (Gene tree)
Gene ID: -
Gene Symbol: riok1
Alias: fb99f04|wu:fb99f04|zgc:56195
Full Name: RIO kinase 1 (yeast)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 9096 bases
Position: chrscaffold_161:58128-67223
Accession: ZDB-GENE-040426-1927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003280	RIO1	PF01163.22	5.8e-74	1	1
ENSGACP00000003274	RIO1	PF01163.22	2.6e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003285	-	1615	-	ENSGACP00000003274	519 (aa)	-	G3ND74
ENSGACT00000003291	-	1724	-	ENSGACP00000003280	506 (aa)	-	G3ND80

Gene Model

Click here to download ENSGACG00000002496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002496	riok1	52	47.212	ENSGACG00000000880	riok3	53	47.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002496	riok1	91	73.375	ENSG00000124784	RIOK1	97	64.791	Homo_sapiens
ENSGACG00000002496	riok1	61	82.524	ENSAPOG00000015632	riok1	94	82.712	Acanthochromis_polyacanthus
ENSGACG00000002496	riok1	94	72.211	ENSAMEG00000017367	RIOK1	97	64.376	Ailuropoda_melanoleuca
ENSGACG00000002496	riok1	95	83.505	ENSACIG00000003735	riok1	86	83.582	Amphilophus_citrinellus
ENSGACG00000002496	riok1	95	87.371	ENSAOCG00000011818	riok1	97	78.072	Amphiprion_ocellaris
ENSGACG00000002496	riok1	95	86.957	ENSAPEG00000001345	riok1	97	77.694	Amphiprion_percula
ENSGACG00000002496	riok1	88	84.152	ENSATEG00000006594	riok1	96	84.332	Anabas_testudineus
ENSGACG00000002496	riok1	91	73.517	ENSAPLG00000004196	RIOK1	97	74.017	Anas_platyrhynchos
ENSGACG00000002496	riok1	98	69.767	ENSACAG00000000695	RIOK1	96	63.119	Anolis_carolinensis
ENSGACG00000002496	riok1	94	62.195	ENSANAG00000023777	RIOK1	97	55.091	Aotus_nancymaae
ENSGACG00000002496	riok1	95	86.270	ENSACLG00000015799	riok1	97	77.966	Astatotilapia_calliptera
ENSGACG00000002496	riok1	95	76.626	ENSAMXG00000015286	riok1	95	69.078	Astyanax_mexicanus
ENSGACG00000002496	riok1	95	70.766	ENSBTAG00000013821	RIOK1	97	63.884	Bos_taurus
ENSGACG00000002496	riok1	93	46.392	WBGene00019698	riok-1	84	47.427	Caenorhabditis_elegans
ENSGACG00000002496	riok1	94	71.138	ENSCJAG00000042960	RIOK1	97	63.455	Callithrix_jacchus
ENSGACG00000002496	riok1	94	71.341	ENSCAFG00000009563	RIOK1	97	63.472	Canis_familiaris
ENSGACG00000002496	riok1	90	71.116	ENSCAFG00020013233	RIOK1	87	66.049	Canis_lupus_dingo
ENSGACG00000002496	riok1	91	72.746	ENSCHIG00000001534	RIOK1	97	63.521	Capra_hircus
ENSGACG00000002496	riok1	71	68.966	ENSTSYG00000011368	RIOK1	96	68.371	Carlito_syrichta
ENSGACG00000002496	riok1	86	72.606	ENSCAPG00000008489	RIOK1	97	72.383	Cavia_aperea
ENSGACG00000002496	riok1	92	70.686	ENSCPOG00000009882	RIOK1	97	61.854	Cavia_porcellus
ENSGACG00000002496	riok1	94	71.748	ENSCCAG00000024061	RIOK1	97	63.818	Cebus_capucinus
ENSGACG00000002496	riok1	91	74.004	ENSCATG00000001548	RIOK1	97	65.076	Cercocebus_atys
ENSGACG00000002496	riok1	94	70.505	ENSCLAG00000003522	RIOK1	97	63.225	Chinchilla_lanigera
ENSGACG00000002496	riok1	81	76.699	ENSCSAG00000007396	RIOK1	89	66.322	Chlorocebus_sabaeus
ENSGACG00000002496	riok1	68	82.051	ENSCHOG00000001873	RIOK1	55	58.824	Choloepus_hoffmanni
ENSGACG00000002496	riok1	81	77.184	ENSCPBG00000008685	RIOK1	84	68.789	Chrysemys_picta_bellii
ENSGACG00000002496	riok1	94	72.358	ENSCANG00000032919	RIOK1	97	65.201	Colobus_angolensis_palliatus
ENSGACG00000002496	riok1	98	68.726	ENSCGRG00001018868	Riok1	97	61.261	Cricetulus_griseus_chok1gshd
ENSGACG00000002496	riok1	98	68.726	ENSCGRG00000008015	Riok1	97	61.261	Cricetulus_griseus_crigri
ENSGACG00000002496	riok1	95	58.487	ENSCSEG00000015014	riok1	94	57.490	Cynoglossus_semilaevis
ENSGACG00000002496	riok1	61	73.955	ENSCVAG00000011291	riok1	95	74.074	Cyprinodon_variegatus
ENSGACG00000002496	riok1	94	78.512	ENSDARG00000016399	riok1	97	71.136	Danio_rerio
ENSGACG00000002496	riok1	94	70.850	ENSDNOG00000015813	RIOK1	97	62.721	Dasypus_novemcinctus
ENSGACG00000002496	riok1	94	71.748	ENSDORG00000008530	Riok1	97	63.899	Dipodomys_ordii
ENSGACG00000002496	riok1	88	52.116	FBgn0036187	RIOK1	68	54.745	Drosophila_melanogaster
ENSGACG00000002496	riok1	94	68.699	ENSETEG00000020273	RIOK1	97	63.321	Echinops_telfairi
ENSGACG00000002496	riok1	93	65.496	ENSEBUG00000013672	riok1	97	58.000	Eptatretus_burgeri
ENSGACG00000002496	riok1	78	78.086	ENSEASG00005012032	RIOK1	85	66.598	Equus_asinus_asinus
ENSGACG00000002496	riok1	91	73.585	ENSECAG00000009007	RIOK1	97	64.065	Equus_caballus
ENSGACG00000002496	riok1	81	62.559	ENSEEUG00000007123	RIOK1	90	65.152	Erinaceus_europaeus
ENSGACG00000002496	riok1	94	78.306	ENSELUG00000017029	riok1	97	70.599	Esox_lucius
ENSGACG00000002496	riok1	92	71.633	ENSFCAG00000027290	RIOK1	97	63.393	Felis_catus
ENSGACG00000002496	riok1	94	71.487	ENSFALG00000013244	RIOK1	97	63.570	Ficedula_albicollis
ENSGACG00000002496	riok1	94	70.732	ENSFDAG00000019139	RIOK1	97	62.862	Fukomys_damarensis
ENSGACG00000002496	riok1	81	82.506	ENSFHEG00000021419	riok1	90	89.516	Fundulus_heteroclitus
ENSGACG00000002496	riok1	80	77.696	ENSGMOG00000018668	riok1	96	83.246	Gadus_morhua
ENSGACG00000002496	riok1	61	67.077	ENSGALG00000012795	RIOK1	96	66.881	Gallus_gallus
ENSGACG00000002496	riok1	92	67.672	ENSGAFG00000004091	riok1	77	71.059	Gambusia_affinis
ENSGACG00000002496	riok1	80	78.133	ENSGAGG00000002262	RIOK1	88	77.240	Gopherus_agassizii
ENSGACG00000002496	riok1	99	61.152	ENSGGOG00000011037	RIOK1	96	62.595	Gorilla_gorilla
ENSGACG00000002496	riok1	91	71.789	ENSHGLG00000008699	RIOK1	97	62.044	Heterocephalus_glaber_female
ENSGACG00000002496	riok1	91	71.789	ENSHGLG00100008188	RIOK1	97	62.044	Heterocephalus_glaber_male
ENSGACG00000002496	riok1	95	79.550	ENSHCOG00000013275	riok1	89	78.616	Hippocampus_comes
ENSGACG00000002496	riok1	94	76.220	ENSIPUG00000003290	riok1	97	69.470	Ictalurus_punctatus
ENSGACG00000002496	riok1	94	71.545	ENSSTOG00000009289	RIOK1	97	63.718	Ictidomys_tridecemlineatus
ENSGACG00000002496	riok1	91	72.785	ENSJJAG00000015152	Riok1	97	64.029	Jaculus_jaculus
ENSGACG00000002496	riok1	76	84.833	ENSKMAG00000019378	riok1	100	84.833	Kryptolebias_marmoratus
ENSGACG00000002496	riok1	95	86.066	ENSLBEG00000016650	riok1	93	80.539	Labrus_bergylta
ENSGACG00000002496	riok1	94	64.694	ENSLACG00000000300	RIOK1	96	56.364	Latimeria_chalumnae
ENSGACG00000002496	riok1	95	76.104	ENSLOCG00000011728	riok1	96	69.669	Lepisosteus_oculatus
ENSGACG00000002496	riok1	94	72.008	ENSLAFG00000005504	RIOK1	98	63.803	Loxodonta_africana
ENSGACG00000002496	riok1	94	72.764	ENSMFAG00000029990	RIOK1	97	65.392	Macaca_fascicularis
ENSGACG00000002496	riok1	94	72.561	ENSMMUG00000015577	RIOK1	97	65.201	Macaca_mulatta
ENSGACG00000002496	riok1	94	70.122	ENSMNEG00000034396	RIOK1	92	69.746	Macaca_nemestrina
ENSGACG00000002496	riok1	91	74.004	ENSMLEG00000026327	RIOK1	97	65.076	Mandrillus_leucophaeus
ENSGACG00000002496	riok1	95	85.626	ENSMAMG00000019557	riok1	96	79.167	Mastacembelus_armatus
ENSGACG00000002496	riok1	95	86.270	ENSMZEG00005019482	riok1	97	78.343	Maylandia_zebra
ENSGACG00000002496	riok1	94	72.279	ENSMGAG00000003816	RIOK1	85	72.083	Meleagris_gallopavo
ENSGACG00000002496	riok1	97	68.701	ENSMAUG00000012751	Riok1	97	61.343	Mesocricetus_auratus
ENSGACG00000002496	riok1	94	70.791	ENSMICG00000044301	RIOK1	82	63.587	Microcebus_murinus
ENSGACG00000002496	riok1	91	71.639	ENSMOCG00000017032	Riok1	97	62.069	Microtus_ochrogaster
ENSGACG00000002496	riok1	91	75.456	ENSMMOG00000020598	riok1	84	75.158	Mola_mola
ENSGACG00000002496	riok1	94	71.984	ENSMODG00000009964	RIOK1	96	63.686	Monodelphis_domestica
ENSGACG00000002496	riok1	95	76.860	ENSMALG00000019982	riok1	97	69.608	Monopterus_albus
ENSGACG00000002496	riok1	94	70.445	MGP_CAROLIEiJ_G0018439	Riok1	96	61.538	Mus_caroli
ENSGACG00000002496	riok1	94	70.445	ENSMUSG00000021428	Riok1	92	68.421	Mus_musculus
ENSGACG00000002496	riok1	94	69.838	MGP_PahariEiJ_G0019507	Riok1	96	62.088	Mus_pahari
ENSGACG00000002496	riok1	94	69.838	MGP_SPRETEiJ_G0019319	Riok1	96	61.355	Mus_spretus
ENSGACG00000002496	riok1	94	71.748	ENSMPUG00000000570	RIOK1	97	63.506	Mustela_putorius_furo
ENSGACG00000002496	riok1	91	73.640	ENSMLUG00000015312	RIOK1	97	64.079	Myotis_lucifugus
ENSGACG00000002496	riok1	91	72.117	ENSNGAG00000021734	Riok1	97	63.455	Nannospalax_galili
ENSGACG00000002496	riok1	87	86.130	ENSNBRG00000017489	riok1	84	87.075	Neolamprologus_brichardi
ENSGACG00000002496	riok1	94	66.109	ENSNLEG00000011621	RIOK1	97	61.390	Nomascus_leucogenys
ENSGACG00000002496	riok1	91	47.679	ENSMEUG00000006679	-	70	59.032	Notamacropus_eugenii
ENSGACG00000002496	riok1	75	67.989	ENSOPRG00000009524	RIOK1	99	67.989	Ochotona_princeps
ENSGACG00000002496	riok1	75	58.186	ENSODEG00000005663	RIOK1	99	58.186	Octodon_degus
ENSGACG00000002496	riok1	95	84.254	ENSONIG00000014010	riok1	96	74.954	Oreochromis_niloticus
ENSGACG00000002496	riok1	88	74.730	ENSOANG00000012553	RIOK1	97	75.501	Ornithorhynchus_anatinus
ENSGACG00000002496	riok1	94	68.889	ENSOCUG00000011824	RIOK1	97	61.360	Oryctolagus_cuniculus
ENSGACG00000002496	riok1	98	80.039	ENSORLG00000008221	riok1	97	80.080	Oryzias_latipes
ENSGACG00000002496	riok1	98	80.507	ENSORLG00020013838	riok1	68	80.677	Oryzias_latipes_hni
ENSGACG00000002496	riok1	95	83.437	ENSORLG00015009817	riok1	96	77.524	Oryzias_latipes_hsok
ENSGACG00000002496	riok1	95	83.644	ENSOMEG00000002758	riok1	86	77.143	Oryzias_melastigma
ENSGACG00000002496	riok1	94	66.529	ENSOGAG00000010192	RIOK1	97	58.974	Otolemur_garnettii
ENSGACG00000002496	riok1	95	71.142	ENSOARG00000017747	RIOK1	97	63.884	Ovis_aries
ENSGACG00000002496	riok1	94	63.434	ENSPPAG00000016349	RIOK1	96	67.434	Pan_paniscus
ENSGACG00000002496	riok1	92	71.079	ENSPPRG00000001932	RIOK1	97	62.389	Panthera_pardus
ENSGACG00000002496	riok1	92	71.487	ENSPTIG00000018545	RIOK1	97	62.745	Panthera_tigris_altaica
ENSGACG00000002496	riok1	94	72.561	ENSPTRG00000017700	RIOK1	97	64.791	Pan_troglodytes
ENSGACG00000002496	riok1	94	72.764	ENSPANG00000016522	RIOK1	97	65.392	Papio_anubis
ENSGACG00000002496	riok1	94	77.366	ENSPKIG00000006442	riok1	87	77.244	Paramormyrops_kingsleyae
ENSGACG00000002496	riok1	94	73.931	ENSPSIG00000006488	RIOK1	95	66.362	Pelodiscus_sinensis
ENSGACG00000002496	riok1	81	74.634	ENSPMGG00000017807	riok1	96	72.702	Periophthalmus_magnuspinnatus
ENSGACG00000002496	riok1	94	70.325	ENSPEMG00000017844	Riok1	97	62.500	Peromyscus_maniculatus_bairdii
ENSGACG00000002496	riok1	66	74.925	ENSPMAG00000006351	riok1	99	64.988	Petromyzon_marinus
ENSGACG00000002496	riok1	86	72.311	ENSPCIG00000012653	RIOK1	86	65.235	Phascolarctos_cinereus
ENSGACG00000002496	riok1	94	78.288	ENSPFOG00000011532	riok1	96	72.605	Poecilia_formosa
ENSGACG00000002496	riok1	94	78.571	ENSPLAG00000001341	riok1	96	72.222	Poecilia_latipinna
ENSGACG00000002496	riok1	94	78.782	ENSPMEG00000007710	riok1	96	71.795	Poecilia_mexicana
ENSGACG00000002496	riok1	94	77.824	ENSPREG00000009237	riok1	96	71.785	Poecilia_reticulata
ENSGACG00000002496	riok1	94	71.545	ENSPPYG00000016207	RIOK1	97	63.406	Pongo_abelii
ENSGACG00000002496	riok1	94	60.202	ENSPCAG00000007892	RIOK1	97	53.931	Procavia_capensis
ENSGACG00000002496	riok1	94	73.428	ENSPVAG00000014091	RIOK1	97	64.884	Pteropus_vampyrus
ENSGACG00000002496	riok1	61	85.942	ENSPNYG00000004465	riok1	96	86.957	Pundamilia_nyererei
ENSGACG00000002496	riok1	94	76.591	ENSPNAG00000015435	riok1	96	70.556	Pygocentrus_nattereri
ENSGACG00000002496	riok1	98	69.320	ENSRNOG00000014049	Riok1	97	72.829	Rattus_norvegicus
ENSGACG00000002496	riok1	94	71.951	ENSRBIG00000036685	RIOK1	97	65.010	Rhinopithecus_bieti
ENSGACG00000002496	riok1	94	72.154	ENSRROG00000036611	RIOK1	97	65.201	Rhinopithecus_roxellana
ENSGACG00000002496	riok1	67	39.503	YOR119C	RIO1	71	39.503	Saccharomyces_cerevisiae
ENSGACG00000002496	riok1	94	72.154	ENSSBOG00000012588	RIOK1	97	65.840	Saimiri_boliviensis_boliviensis
ENSGACG00000002496	riok1	80	75.676	ENSSHAG00000003091	RIOK1	92	65.618	Sarcophilus_harrisii
ENSGACG00000002496	riok1	94	78.279	ENSSFOG00015001035	riok1	97	70.093	Scleropages_formosus
ENSGACG00000002496	riok1	61	82.166	ENSSDUG00000007291	riok1	95	82.667	Seriola_dumerili
ENSGACG00000002496	riok1	95	89.256	ENSSLDG00000017657	riok1	97	81.250	Seriola_lalandi_dorsalis
ENSGACG00000002496	riok1	88	64.667	ENSSPUG00000007624	RIOK1	83	61.277	Sphenodon_punctatus
ENSGACG00000002496	riok1	95	87.785	ENSSPAG00000022710	riok1	97	79.087	Stegastes_partitus
ENSGACG00000002496	riok1	94	70.122	ENSSSCG00000001024	RIOK1	97	63.289	Sus_scrofa
ENSGACG00000002496	riok1	94	72.008	ENSTGUG00000002331	RIOK1	97	63.784	Taeniopygia_guttata
ENSGACG00000002496	riok1	84	67.991	ENSTRUG00000002854	riok1	95	68.041	Takifugu_rubripes
ENSGACG00000002496	riok1	55	73.333	ENSTRUG00000001575	-	95	72.694	Takifugu_rubripes
ENSGACG00000002496	riok1	95	73.589	ENSTNIG00000003078	riok1	95	67.712	Tetraodon_nigroviridis
ENSGACG00000002496	riok1	94	67.886	ENSTBEG00000016730	RIOK1	97	60.182	Tupaia_belangeri
ENSGACG00000002496	riok1	76	78.093	ENSTTRG00000017335	RIOK1	81	78.093	Tursiops_truncatus
ENSGACG00000002496	riok1	87	71.491	ENSUAMG00000003721	RIOK1	87	67.078	Ursus_americanus
ENSGACG00000002496	riok1	94	72.561	ENSUMAG00000018461	RIOK1	97	64.312	Ursus_maritimus
ENSGACG00000002496	riok1	94	71.748	ENSVVUG00000005018	RIOK1	97	64.014	Vulpes_vulpes
ENSGACG00000002496	riok1	95	68.980	ENSXETG00000020436	riok1	76	75.355	Xenopus_tropicalis
ENSGACG00000002496	riok1	91	74.565	ENSXCOG00000000245	riok1	97	73.571	Xiphophorus_couchianus
ENSGACG00000002496	riok1	80	80.344	ENSXMAG00000014572	riok1	91	72.479	Xiphophorus_maculatus