EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002544 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: sharpin and rbck1 related
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 5625 bases
Position: chrgroupXXI:5790345-5795969
Accession: ZDB-GENE-080220-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003333	zf-RanBP	PF00641.18	4.2e-07	1	1
ENSGACP00000003330	zf-RanBP	PF00641.18	6.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003341	-	2117	-	ENSGACP00000003330	507 (aa)	-	G3NDD0
ENSGACT00000003344	-	1563	-	ENSGACP00000003333	492 (aa)	-	G3NDD3

Gene Model

Click here to download ENSGACG00000002544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002544	shrprbck1r	100	82.430	ENSAPOG00000022737	shrprbck1r	75	82.430	Acanthochromis_polyacanthus
ENSGACG00000002544	shrprbck1r	100	80.151	ENSACIG00000002184	shrprbck1r	75	80.151	Amphilophus_citrinellus
ENSGACG00000002544	shrprbck1r	100	83.083	ENSAOCG00000002890	shrprbck1r	75	83.083	Amphiprion_ocellaris
ENSGACG00000002544	shrprbck1r	100	82.804	ENSAPEG00000023274	shrprbck1r	77	82.804	Amphiprion_percula
ENSGACG00000002544	shrprbck1r	100	83.835	ENSATEG00000014561	shrprbck1r	76	83.835	Anabas_testudineus
ENSGACG00000002544	shrprbck1r	100	79.511	ENSACLG00000022609	shrprbck1r	77	79.511	Astatotilapia_calliptera
ENSGACG00000002544	shrprbck1r	99	68.841	ENSAMXG00000021016	shrprbck1r	77	68.036	Astyanax_mexicanus
ENSGACG00000002544	shrprbck1r	100	78.679	ENSCSEG00000011306	shrprbck1r	76	78.679	Cynoglossus_semilaevis
ENSGACG00000002544	shrprbck1r	99	78.343	ENSCVAG00000007250	shrprbck1r	75	78.343	Cyprinodon_variegatus
ENSGACG00000002544	shrprbck1r	99	68.715	ENSDARG00000059871	shrprbck1r	75	68.715	Danio_rerio
ENSGACG00000002544	shrprbck1r	99	74.664	ENSELUG00000016022	shrprbck1r	94	77.619	Esox_lucius
ENSGACG00000002544	shrprbck1r	99	79.463	ENSGAFG00000009309	shrprbck1r	76	77.632	Gambusia_affinis
ENSGACG00000002544	shrprbck1r	100	79.323	ENSHBUG00000021933	shrprbck1r	75	79.323	Haplochromis_burtoni
ENSGACG00000002544	shrprbck1r	99	66.543	ENSIPUG00000014247	shrprbck1r	75	66.606	Ictalurus_punctatus
ENSGACG00000002544	shrprbck1r	99	80.000	ENSKMAG00000015215	shrprbck1r	74	80.000	Kryptolebias_marmoratus
ENSGACG00000002544	shrprbck1r	100	83.459	ENSLBEG00000016876	shrprbck1r	75	83.459	Labrus_bergylta
ENSGACG00000002544	shrprbck1r	99	52.985	ENSLACG00000010948	-	76	52.593	Latimeria_chalumnae
ENSGACG00000002544	shrprbck1r	99	67.658	ENSLOCG00000008910	shrprbck1r	76	67.276	Lepisosteus_oculatus
ENSGACG00000002544	shrprbck1r	100	80.718	ENSMAMG00000022930	shrprbck1r	75	80.718	Mastacembelus_armatus
ENSGACG00000002544	shrprbck1r	100	79.511	ENSMZEG00005021257	shrprbck1r	75	79.511	Maylandia_zebra
ENSGACG00000002544	shrprbck1r	100	79.368	ENSMMOG00000003764	shrprbck1r	77	79.368	Mola_mola
ENSGACG00000002544	shrprbck1r	100	81.579	ENSMALG00000008861	shrprbck1r	75	81.579	Monopterus_albus
ENSGACG00000002544	shrprbck1r	100	79.727	ENSNBRG00000002270	shrprbck1r	75	80.897	Neolamprologus_brichardi
ENSGACG00000002544	shrprbck1r	100	79.962	ENSONIG00000014401	shrprbck1r	75	79.962	Oreochromis_niloticus
ENSGACG00000002544	shrprbck1r	99	77.401	ENSORLG00000007392	shrprbck1r	75	77.401	Oryzias_latipes
ENSGACG00000002544	shrprbck1r	99	77.024	ENSORLG00020018619	shrprbck1r	75	77.024	Oryzias_latipes_hni
ENSGACG00000002544	shrprbck1r	99	76.648	ENSORLG00015018865	shrprbck1r	75	76.648	Oryzias_latipes_hsok
ENSGACG00000002544	shrprbck1r	99	77.966	ENSOMEG00000012749	shrprbck1r	75	77.966	Oryzias_melastigma
ENSGACG00000002544	shrprbck1r	99	71.107	ENSPKIG00000006933	shrprbck1r	76	71.107	Paramormyrops_kingsleyae
ENSGACG00000002544	shrprbck1r	50	55.749	ENSPKIG00000018308	-	59	57.857	Paramormyrops_kingsleyae
ENSGACG00000002544	shrprbck1r	99	77.273	ENSPMGG00000013254	shrprbck1r	77	76.966	Periophthalmus_magnuspinnatus
ENSGACG00000002544	shrprbck1r	99	79.127	ENSPFOG00000004214	shrprbck1r	75	79.127	Poecilia_formosa
ENSGACG00000002544	shrprbck1r	99	78.748	ENSPLAG00000020523	shrprbck1r	75	78.748	Poecilia_latipinna
ENSGACG00000002544	shrprbck1r	99	78.748	ENSPMEG00000006877	shrprbck1r	75	78.748	Poecilia_mexicana
ENSGACG00000002544	shrprbck1r	99	78.368	ENSPREG00000014689	shrprbck1r	76	77.632	Poecilia_reticulata
ENSGACG00000002544	shrprbck1r	100	79.699	ENSPNYG00000022601	shrprbck1r	75	79.699	Pundamilia_nyererei
ENSGACG00000002544	shrprbck1r	99	70.818	ENSPNAG00000007847	shrprbck1r	75	70.350	Pygocentrus_nattereri
ENSGACG00000002544	shrprbck1r	99	68.293	ENSSFOG00015014150	-	98	68.000	Scleropages_formosus
ENSGACG00000002544	shrprbck1r	100	81.682	ENSSMAG00000018085	shrprbck1r	75	81.682	Scophthalmus_maximus
ENSGACG00000002544	shrprbck1r	100	84.280	ENSSDUG00000002959	shrprbck1r	75	84.280	Seriola_dumerili
ENSGACG00000002544	shrprbck1r	100	83.459	ENSSLDG00000009026	shrprbck1r	75	83.459	Seriola_lalandi_dorsalis
ENSGACG00000002544	shrprbck1r	94	81.445	ENSSPAG00000016097	shrprbck1r	74	81.445	Stegastes_partitus
ENSGACG00000002544	shrprbck1r	100	79.550	ENSTRUG00000006949	shrprbck1r	78	79.550	Takifugu_rubripes
ENSGACG00000002544	shrprbck1r	99	78.748	ENSXCOG00000006701	shrprbck1r	77	78.748	Xiphophorus_couchianus
ENSGACG00000002544	shrprbck1r	99	78.748	ENSXMAG00000018972	shrprbck1r	77	78.748	Xiphophorus_maculatus