EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002576 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 10359 bases
Position: chrgroupXII:163114-173472
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003409	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003420	-	2820	-	ENSGACP00000003409	939 (aa)	-	G3NDK9

Gene Model

Click here to download ENSGACG00000002576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002576	prpf6	99	90.861	ENSG00000101161	PRPF6	100	90.861	Homo_sapiens
ENSGACG00000002576	prpf6	100	96.504	ENSAPOG00000010395	prpf6	97	96.504	Acanthochromis_polyacanthus
ENSGACG00000002576	prpf6	99	90.127	ENSAMEG00000001916	PRPF6	99	90.127	Ailuropoda_melanoleuca
ENSGACG00000002576	prpf6	100	95.869	ENSACIG00000019862	prpf6	97	95.869	Amphilophus_citrinellus
ENSGACG00000002576	prpf6	100	96.610	ENSAOCG00000012988	prpf6	97	96.610	Amphiprion_ocellaris
ENSGACG00000002576	prpf6	99	89.850	ENSAPEG00000008301	prpf6	100	90.064	Amphiprion_percula
ENSGACG00000002576	prpf6	100	96.398	ENSATEG00000005581	prpf6	97	96.398	Anabas_testudineus
ENSGACG00000002576	prpf6	99	91.073	ENSACAG00000006464	PRPF6	95	91.073	Anolis_carolinensis
ENSGACG00000002576	prpf6	99	90.967	ENSANAG00000012661	PRPF6	100	91.755	Aotus_nancymaae
ENSGACG00000002576	prpf6	100	95.551	ENSACLG00000025875	prpf6	97	95.551	Astatotilapia_calliptera
ENSGACG00000002576	prpf6	99	93.750	ENSAMXG00000001929	prpf6	97	93.750	Astyanax_mexicanus
ENSGACG00000002576	prpf6	99	91.073	ENSBTAG00000011656	PRPF6	100	91.073	Bos_taurus
ENSGACG00000002576	prpf6	99	90.967	ENSCJAG00000010616	PRPF6	100	90.967	Callithrix_jacchus
ENSGACG00000002576	prpf6	99	91.180	ENSCAFG00000013165	PRPF6	100	91.180	Canis_familiaris
ENSGACG00000002576	prpf6	99	91.180	ENSCAFG00020002050	PRPF6	100	91.180	Canis_lupus_dingo
ENSGACG00000002576	prpf6	99	91.073	ENSCHIG00000018187	PRPF6	100	91.073	Capra_hircus
ENSGACG00000002576	prpf6	99	91.286	ENSTSYG00000007814	PRPF6	100	91.286	Carlito_syrichta
ENSGACG00000002576	prpf6	97	90.294	ENSCAPG00000015077	PRPF6	100	89.858	Cavia_aperea
ENSGACG00000002576	prpf6	99	91.605	ENSCPOG00000007518	PRPF6	100	91.605	Cavia_porcellus
ENSGACG00000002576	prpf6	99	87.885	ENSCCAG00000024564	PRPF6	100	87.885	Cebus_capucinus
ENSGACG00000002576	prpf6	99	90.967	ENSCATG00000037473	PRPF6	100	90.967	Cercocebus_atys
ENSGACG00000002576	prpf6	99	88.098	ENSCLAG00000003854	PRPF6	100	88.098	Chinchilla_lanigera
ENSGACG00000002576	prpf6	99	86.167	ENSCSAG00000016742	PRPF6	100	86.167	Chlorocebus_sabaeus
ENSGACG00000002576	prpf6	84	77.236	ENSCHOG00000003315	-	98	77.025	Choloepus_hoffmanni
ENSGACG00000002576	prpf6	99	91.702	ENSCPBG00000013964	PRPF6	96	91.702	Chrysemys_picta_bellii
ENSGACG00000002576	prpf6	99	72.275	ENSCING00000008817	-	99	72.275	Ciona_intestinalis
ENSGACG00000002576	prpf6	99	90.755	ENSCANG00000038230	PRPF6	100	90.755	Colobus_angolensis_palliatus
ENSGACG00000002576	prpf6	99	91.605	ENSCGRG00001022666	Prpf6	100	91.605	Cricetulus_griseus_chok1gshd
ENSGACG00000002576	prpf6	99	90.064	ENSCSEG00000018561	prpf6	100	90.064	Cynoglossus_semilaevis
ENSGACG00000002576	prpf6	100	95.869	ENSCVAG00000010550	prpf6	97	95.869	Cyprinodon_variegatus
ENSGACG00000002576	prpf6	99	93.856	ENSDARG00000091367	prpf6	100	93.856	Danio_rerio
ENSGACG00000002576	prpf6	99	90.381	ENSDNOG00000040544	PRPF6	100	90.381	Dasypus_novemcinctus
ENSGACG00000002576	prpf6	90	91.238	ENSDORG00000005406	Prpf6	100	91.238	Dipodomys_ordii
ENSGACG00000002576	prpf6	99	70.874	FBgn0036828	CG6841	99	70.874	Drosophila_melanogaster
ENSGACG00000002576	prpf6	85	91.082	ENSETEG00000004447	PRPF6	85	91.082	Echinops_telfairi
ENSGACG00000002576	prpf6	99	84.868	ENSEBUG00000008835	prpf6	100	84.868	Eptatretus_burgeri
ENSGACG00000002576	prpf6	100	91.073	ENSEASG00005023115	PRPF6	100	91.542	Equus_asinus_asinus
ENSGACG00000002576	prpf6	99	87.035	ENSECAG00000013983	PRPF6	100	87.035	Equus_caballus
ENSGACG00000002576	prpf6	89	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSGACG00000002576	prpf6	99	94.062	ENSELUG00000001945	prpf6	94	94.062	Esox_lucius
ENSGACG00000002576	prpf6	99	91.180	ENSFCAG00000001183	PRPF6	100	91.180	Felis_catus
ENSGACG00000002576	prpf6	99	85.272	ENSFALG00000006046	-	97	85.272	Ficedula_albicollis
ENSGACG00000002576	prpf6	99	91.217	ENSFALG00000010326	-	98	91.217	Ficedula_albicollis
ENSGACG00000002576	prpf6	99	90.117	ENSFDAG00000006451	PRPF6	100	91.156	Fukomys_damarensis
ENSGACG00000002576	prpf6	100	96.292	ENSFHEG00000000560	prpf6	97	96.292	Fundulus_heteroclitus
ENSGACG00000002576	prpf6	99	94.989	ENSGMOG00000015622	prpf6	99	94.989	Gadus_morhua
ENSGACG00000002576	prpf6	99	91.286	ENSGALG00000006001	PRPF6	100	91.286	Gallus_gallus
ENSGACG00000002576	prpf6	100	91.208	ENSGAFG00000021109	prpf6	97	91.208	Gambusia_affinis
ENSGACG00000002576	prpf6	99	91.809	ENSGAGG00000008653	PRPF6	96	91.809	Gopherus_agassizii
ENSGACG00000002576	prpf6	99	90.861	ENSGGOG00000016876	PRPF6	100	90.861	Gorilla_gorilla
ENSGACG00000002576	prpf6	100	95.551	ENSHBUG00000004496	prpf6	97	95.551	Haplochromis_burtoni
ENSGACG00000002576	prpf6	99	91.498	ENSHGLG00000009222	PRPF6	100	91.498	Heterocephalus_glaber_female
ENSGACG00000002576	prpf6	97	91.385	ENSHGLG00100016600	PRPF6	100	91.385	Heterocephalus_glaber_male
ENSGACG00000002576	prpf6	100	95.657	ENSHCOG00000011513	prpf6	97	95.657	Hippocampus_comes
ENSGACG00000002576	prpf6	99	93.737	ENSIPUG00000004912	prpf6	97	93.737	Ictalurus_punctatus
ENSGACG00000002576	prpf6	99	89.066	ENSSTOG00000002922	PRPF6	100	88.641	Ictidomys_tridecemlineatus
ENSGACG00000002576	prpf6	99	91.605	ENSJJAG00000000836	Prpf6	100	91.605	Jaculus_jaculus
ENSGACG00000002576	prpf6	100	95.445	ENSKMAG00000017800	prpf6	97	95.445	Kryptolebias_marmoratus
ENSGACG00000002576	prpf6	100	96.398	ENSLBEG00000012582	prpf6	97	96.398	Labrus_bergylta
ENSGACG00000002576	prpf6	99	92.979	ENSLOCG00000004827	prpf6	96	91.596	Lepisosteus_oculatus
ENSGACG00000002576	prpf6	99	90.861	ENSLAFG00000005272	PRPF6	100	90.861	Loxodonta_africana
ENSGACG00000002576	prpf6	99	90.755	ENSMFAG00000037542	PRPF6	100	90.755	Macaca_fascicularis
ENSGACG00000002576	prpf6	99	84.607	ENSMMUG00000015558	PRPF6	98	91.681	Macaca_mulatta
ENSGACG00000002576	prpf6	99	78.942	ENSMNEG00000045555	PRPF6	100	78.942	Macaca_nemestrina
ENSGACG00000002576	prpf6	100	95.975	ENSMAMG00000010718	prpf6	97	95.975	Mastacembelus_armatus
ENSGACG00000002576	prpf6	99	95.021	ENSMZEG00005015261	-	100	95.021	Maylandia_zebra
ENSGACG00000002576	prpf6	93	95.553	ENSMZEG00005026539	prpf6	100	95.553	Maylandia_zebra
ENSGACG00000002576	prpf6	97	91.385	ENSMGAG00000006634	PRPF6	100	91.385	Meleagris_gallopavo
ENSGACG00000002576	prpf6	99	91.605	ENSMAUG00000013969	Prpf6	100	91.605	Mesocricetus_auratus
ENSGACG00000002576	prpf6	87	90.511	ENSMICG00000017793	PRPF6	98	90.506	Microcebus_murinus
ENSGACG00000002576	prpf6	99	91.498	ENSMOCG00000001701	Prpf6	100	91.498	Microtus_ochrogaster
ENSGACG00000002576	prpf6	99	95.299	ENSMMOG00000020419	prpf6	100	95.299	Mola_mola
ENSGACG00000002576	prpf6	97	92.232	ENSMODG00000017051	PRPF6	99	92.232	Monodelphis_domestica
ENSGACG00000002576	prpf6	98	95.788	ENSMALG00000000089	prpf6	100	95.788	Monopterus_albus
ENSGACG00000002576	prpf6	99	85.228	MGP_CAROLIEiJ_G0024814	Prpf6	100	90.741	Mus_caroli
ENSGACG00000002576	prpf6	99	91.605	ENSMUSG00000002455	Prpf6	100	91.605	Mus_musculus
ENSGACG00000002576	prpf6	99	91.605	MGP_PahariEiJ_G0026262	Prpf6	100	91.605	Mus_pahari
ENSGACG00000002576	prpf6	99	91.605	MGP_SPRETEiJ_G0025741	Prpf6	100	91.605	Mus_spretus
ENSGACG00000002576	prpf6	89	91.495	ENSMPUG00000008673	PRPF6	99	90.942	Mustela_putorius_furo
ENSGACG00000002576	prpf6	99	91.711	ENSNGAG00000003365	Prpf6	100	91.711	Nannospalax_galili
ENSGACG00000002576	prpf6	100	95.657	ENSNBRG00000015025	prpf6	97	95.657	Neolamprologus_brichardi
ENSGACG00000002576	prpf6	99	90.755	ENSNLEG00000010208	PRPF6	100	90.755	Nomascus_leucogenys
ENSGACG00000002576	prpf6	99	83.133	ENSMEUG00000009824	-	90	83.399	Notamacropus_eugenii
ENSGACG00000002576	prpf6	99	85.654	ENSODEG00000004841	PRPF6	100	85.654	Octodon_degus
ENSGACG00000002576	prpf6	100	95.763	ENSONIG00000017406	prpf6	97	95.763	Oreochromis_niloticus
ENSGACG00000002576	prpf6	99	91.605	ENSOANG00000004920	PRPF6	100	91.605	Ornithorhynchus_anatinus
ENSGACG00000002576	prpf6	98	89.270	ENSOCUG00000014151	PRPF6	100	89.270	Oryctolagus_cuniculus
ENSGACG00000002576	prpf6	100	95.233	ENSORLG00000009592	prpf6	97	95.233	Oryzias_latipes
ENSGACG00000002576	prpf6	100	95.127	ENSORLG00020001458	prpf6	97	95.127	Oryzias_latipes_hni
ENSGACG00000002576	prpf6	100	95.127	ENSORLG00015018762	prpf6	97	95.127	Oryzias_latipes_hsok
ENSGACG00000002576	prpf6	100	95.127	ENSOMEG00000012174	prpf6	97	95.127	Oryzias_melastigma
ENSGACG00000002576	prpf6	99	84.183	ENSOGAG00000007573	PRPF6	100	84.183	Otolemur_garnettii
ENSGACG00000002576	prpf6	99	90.648	ENSOARG00000008776	PRPF6	99	90.648	Ovis_aries
ENSGACG00000002576	prpf6	99	90.861	ENSPPAG00000008686	PRPF6	100	90.861	Pan_paniscus
ENSGACG00000002576	prpf6	99	91.180	ENSPPRG00000008497	PRPF6	100	91.180	Panthera_pardus
ENSGACG00000002576	prpf6	97	91.058	ENSPTIG00000011184	PRPF6	97	91.058	Panthera_tigris_altaica
ENSGACG00000002576	prpf6	99	90.861	ENSPTRG00000013765	PRPF6	100	90.861	Pan_troglodytes
ENSGACG00000002576	prpf6	99	90.542	ENSPANG00000024135	PRPF6	100	90.542	Papio_anubis
ENSGACG00000002576	prpf6	99	93.723	ENSPKIG00000005627	prpf6	99	93.723	Paramormyrops_kingsleyae
ENSGACG00000002576	prpf6	93	91.156	ENSPSIG00000007717	PRPF6	100	91.156	Pelodiscus_sinensis
ENSGACG00000002576	prpf6	100	94.180	ENSPMGG00000008925	prpf6	97	93.439	Periophthalmus_magnuspinnatus
ENSGACG00000002576	prpf6	99	91.605	ENSPEMG00000016036	Prpf6	100	91.605	Peromyscus_maniculatus_bairdii
ENSGACG00000002576	prpf6	99	87.340	ENSPMAG00000006144	prpf6	99	87.340	Petromyzon_marinus
ENSGACG00000002576	prpf6	99	91.711	ENSPCIG00000017909	PRPF6	100	91.711	Phascolarctos_cinereus
ENSGACG00000002576	prpf6	100	96.093	ENSPFOG00000006431	prpf6	96	96.093	Poecilia_formosa
ENSGACG00000002576	prpf6	100	95.869	ENSPLAG00000005974	prpf6	97	95.869	Poecilia_latipinna
ENSGACG00000002576	prpf6	100	95.975	ENSPMEG00000009977	prpf6	97	95.975	Poecilia_mexicana
ENSGACG00000002576	prpf6	100	95.975	ENSPREG00000017993	prpf6	92	95.975	Poecilia_reticulata
ENSGACG00000002576	prpf6	99	90.329	ENSPPYG00000011256	PRPF6	100	90.329	Pongo_abelii
ENSGACG00000002576	prpf6	94	92.647	ENSPCAG00000006536	PRPF6	88	92.647	Procavia_capensis
ENSGACG00000002576	prpf6	99	90.861	ENSPCOG00000016881	PRPF6	100	90.861	Propithecus_coquereli
ENSGACG00000002576	prpf6	99	85.228	ENSPVAG00000014316	PRPF6	100	85.228	Pteropus_vampyrus
ENSGACG00000002576	prpf6	100	82.521	ENSPNYG00000001939	prpf6	97	82.521	Pundamilia_nyererei
ENSGACG00000002576	prpf6	99	94.280	ENSPNAG00000015606	prpf6	97	94.280	Pygocentrus_nattereri
ENSGACG00000002576	prpf6	99	91.498	ENSRNOG00000051498	Prpf6	100	91.498	Rattus_norvegicus
ENSGACG00000002576	prpf6	99	90.755	ENSRBIG00000043613	PRPF6	100	90.755	Rhinopithecus_bieti
ENSGACG00000002576	prpf6	99	87.725	ENSRROG00000040969	PRPF6	98	90.311	Rhinopithecus_roxellana
ENSGACG00000002576	prpf6	90	87.080	ENSSBOG00000020632	PRPF6	93	85.640	Saimiri_boliviensis_boliviensis
ENSGACG00000002576	prpf6	99	91.711	ENSSHAG00000016810	PRPF6	100	91.711	Sarcophilus_harrisii
ENSGACG00000002576	prpf6	98	93.548	ENSSFOG00015020859	prpf6	100	93.548	Scleropages_formosus
ENSGACG00000002576	prpf6	100	96.186	ENSSMAG00000008112	prpf6	97	96.186	Scophthalmus_maximus
ENSGACG00000002576	prpf6	100	96.292	ENSSDUG00000016142	prpf6	97	96.292	Seriola_dumerili
ENSGACG00000002576	prpf6	100	96.292	ENSSLDG00000025283	prpf6	97	96.292	Seriola_lalandi_dorsalis
ENSGACG00000002576	prpf6	93	89.290	ENSSPUG00000018260	PRPF6	100	89.290	Sphenodon_punctatus
ENSGACG00000002576	prpf6	100	96.610	ENSSPAG00000015850	prpf6	97	96.610	Stegastes_partitus
ENSGACG00000002576	prpf6	99	90.755	ENSSSCG00000029119	PRPF6	100	90.249	Sus_scrofa
ENSGACG00000002576	prpf6	99	91.314	ENSTGUG00000007221	PRPF6	100	91.314	Taeniopygia_guttata
ENSGACG00000002576	prpf6	100	95.021	ENSTRUG00000002920	prpf6	97	95.021	Takifugu_rubripes
ENSGACG00000002576	prpf6	99	88.948	ENSTNIG00000017873	prpf6	100	88.948	Tetraodon_nigroviridis
ENSGACG00000002576	prpf6	88	92.778	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSGACG00000002576	prpf6	99	90.861	ENSTTRG00000013068	PRPF6	100	90.861	Tursiops_truncatus
ENSGACG00000002576	prpf6	97	89.640	ENSUMAG00000021631	PRPF6	98	89.640	Ursus_maritimus
ENSGACG00000002576	prpf6	99	91.180	ENSVVUG00000014948	PRPF6	100	91.180	Vulpes_vulpes
ENSGACG00000002576	prpf6	99	91.064	ENSXETG00000012054	prpf6	97	91.064	Xenopus_tropicalis
ENSGACG00000002576	prpf6	100	95.869	ENSXCOG00000008082	prpf6	97	95.869	Xiphophorus_couchianus
ENSGACG00000002576	prpf6	100	95.869	ENSXMAG00000015581	prpf6	97	95.869	Xiphophorus_maculatus