EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002606 (Gene tree)
Gene ID: -
Gene Symbol: cnot1
Alias: cdc39-like|im:7141761|kiaa1007l|wu:fc58h04|zgc:152902
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 19481 bases
Position: chrgroupXIX:1759814-1779294
Accession: ZDB-GENE-040915-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003422	Not1	PF04054.15	5.4e-154	1	1
ENSGACP00000003431	Not1	PF04054.15	7.8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003442	-	6474	-	ENSGACP00000003431	2158 (aa)	-	G3NDN1
ENSGACT00000003433	-	3535	-	ENSGACP00000003422	824 (aa)	-	G3NDM2

Gene Model

Click here to download ENSGACG00000002606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002606	cnot1	100	95.752	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSGACG00000002606	cnot1	99	93.788	ENSAPOG00000005042	cnot1	90	93.788	Acanthochromis_polyacanthus
ENSGACG00000002606	cnot1	100	95.752	ENSAMEG00000017298	CNOT1	91	90.496	Ailuropoda_melanoleuca
ENSGACG00000002606	cnot1	100	97.573	ENSACIG00000016003	cnot1	90	95.682	Amphilophus_citrinellus
ENSGACG00000002606	cnot1	100	99.515	ENSAOCG00000002859	cnot1	100	99.515	Amphiprion_ocellaris
ENSGACG00000002606	cnot1	100	99.515	ENSAPEG00000022342	cnot1	90	95.735	Amphiprion_percula
ENSGACG00000002606	cnot1	99	94.022	ENSATEG00000012892	cnot1	90	94.022	Anabas_testudineus
ENSGACG00000002606	cnot1	100	94.667	ENSAPLG00000007162	CNOT1	91	89.705	Anas_platyrhynchos
ENSGACG00000002606	cnot1	99	89.345	ENSACAG00000001602	CNOT1	98	89.663	Anolis_carolinensis
ENSGACG00000002606	cnot1	99	89.926	ENSANAG00000038198	CNOT1	93	90.403	Aotus_nancymaae
ENSGACG00000002606	cnot1	100	99.394	ENSACLG00000014234	cnot1	90	94.112	Astatotilapia_calliptera
ENSGACG00000002606	cnot1	100	97.576	ENSAMXG00000013170	cnot1	91	93.970	Astyanax_mexicanus
ENSGACG00000002606	cnot1	100	95.752	ENSBTAG00000020782	CNOT1	90	95.307	Bos_taurus
ENSGACG00000002606	cnot1	99	40.946	WBGene00002845	let-711	91	55.365	Caenorhabditis_elegans
ENSGACG00000002606	cnot1	100	95.752	ENSCJAG00000011318	CNOT1	100	92.364	Callithrix_jacchus
ENSGACG00000002606	cnot1	100	94.934	ENSCAFG00000008426	CNOT1	91	89.802	Canis_familiaris
ENSGACG00000002606	cnot1	100	93.826	ENSCAFG00020010156	CNOT1	90	95.307	Canis_lupus_dingo
ENSGACG00000002606	cnot1	100	95.752	ENSCHIG00000010452	CNOT1	91	90.241	Capra_hircus
ENSGACG00000002606	cnot1	100	95.752	ENSTSYG00000006888	CNOT1	92	90.496	Carlito_syrichta
ENSGACG00000002606	cnot1	97	73.625	ENSCAPG00000007848	-	99	73.625	Cavia_aperea
ENSGACG00000002606	cnot1	100	95.874	ENSCPOG00000013026	CNOT1	92	85.747	Cavia_porcellus
ENSGACG00000002606	cnot1	100	95.752	ENSCCAG00000026333	CNOT1	92	88.734	Cebus_capucinus
ENSGACG00000002606	cnot1	100	95.752	ENSCATG00000032625	CNOT1	92	90.450	Cercocebus_atys
ENSGACG00000002606	cnot1	100	95.874	ENSCLAG00000006289	CNOT1	91	90.194	Chinchilla_lanigera
ENSGACG00000002606	cnot1	100	95.752	ENSCSAG00000004731	CNOT1	91	90.194	Chlorocebus_sabaeus
ENSGACG00000002606	cnot1	81	97.173	ENSCHOG00000009712	CNOT1	73	100.000	Choloepus_hoffmanni
ENSGACG00000002606	cnot1	100	95.388	ENSCPBG00000026222	CNOT1	88	93.950	Chrysemys_picta_bellii
ENSGACG00000002606	cnot1	100	75.966	ENSCING00000009149	-	90	56.367	Ciona_intestinalis
ENSGACG00000002606	cnot1	99	75.424	ENSCSAVG00000002414	-	83	79.470	Ciona_savignyi
ENSGACG00000002606	cnot1	100	94.946	ENSCANG00000040534	CNOT1	92	88.786	Colobus_angolensis_palliatus
ENSGACG00000002606	cnot1	100	95.631	ENSCGRG00001016365	Cnot1	92	90.125	Cricetulus_griseus_chok1gshd
ENSGACG00000002606	cnot1	100	95.631	ENSCGRG00000001714	Cnot1	92	90.125	Cricetulus_griseus_crigri
ENSGACG00000002606	cnot1	100	97.226	ENSCSEG00000021493	cnot1	100	97.226	Cynoglossus_semilaevis
ENSGACG00000002606	cnot1	97	98.773	ENSCVAG00000018930	cnot1	90	98.773	Cyprinodon_variegatus
ENSGACG00000002606	cnot1	100	96.970	ENSDARG00000004174	cnot1	91	93.513	Danio_rerio
ENSGACG00000002606	cnot1	100	93.333	ENSDNOG00000013250	CNOT1	91	87.748	Dasypus_novemcinctus
ENSGACG00000002606	cnot1	100	95.752	ENSDORG00000002101	-	100	95.752	Dipodomys_ordii
ENSGACG00000002606	cnot1	99	54.187	FBgn0085436	Not1	89	45.388	Drosophila_melanogaster
ENSGACG00000002606	cnot1	86	97.917	ENSETEG00000012806	CNOT1	75	96.818	Echinops_telfairi
ENSGACG00000002606	cnot1	79	85.393	ENSEBUG00000011534	cnot1	86	85.393	Eptatretus_burgeri
ENSGACG00000002606	cnot1	100	95.752	ENSEASG00005005819	CNOT1	90	95.307	Equus_asinus_asinus
ENSGACG00000002606	cnot1	100	95.752	ENSECAG00000009889	CNOT1	91	90.194	Equus_caballus
ENSGACG00000002606	cnot1	100	89.078	ENSEEUG00000006015	CNOT1	80	89.601	Erinaceus_europaeus
ENSGACG00000002606	cnot1	100	96.690	ENSELUG00000014085	cnot1	90	94.929	Esox_lucius
ENSGACG00000002606	cnot1	100	95.752	ENSFCAG00000025155	CNOT1	91	89.949	Felis_catus
ENSGACG00000002606	cnot1	100	95.510	ENSFALG00000007285	CNOT1	91	89.963	Ficedula_albicollis
ENSGACG00000002606	cnot1	100	95.874	ENSFDAG00000013399	CNOT1	92	90.403	Fukomys_damarensis
ENSGACG00000002606	cnot1	100	97.576	ENSFHEG00000020574	cnot1	91	94.910	Fundulus_heteroclitus
ENSGACG00000002606	cnot1	99	95.961	ENSGMOG00000012864	cnot1	100	95.961	Gadus_morhua
ENSGACG00000002606	cnot1	100	95.510	ENSGALG00000002301	CNOT1	91	89.732	Gallus_gallus
ENSGACG00000002606	cnot1	100	98.061	ENSGAFG00000015005	cnot1	90	93.139	Gambusia_affinis
ENSGACG00000002606	cnot1	100	95.388	ENSGAGG00000022646	CNOT1	91	89.963	Gopherus_agassizii
ENSGACG00000002606	cnot1	100	95.752	ENSGGOG00000009547	CNOT1	91	90.287	Gorilla_gorilla
ENSGACG00000002606	cnot1	100	99.394	ENSHBUG00000001729	cnot1	90	94.159	Haplochromis_burtoni
ENSGACG00000002606	cnot1	100	95.874	ENSHGLG00000014322	CNOT1	92	90.357	Heterocephalus_glaber_female
ENSGACG00000002606	cnot1	100	97.947	ENSHCOG00000006501	cnot1	91	95.974	Hippocampus_comes
ENSGACG00000002606	cnot1	100	96.029	ENSIPUG00000011915	cnot1	90	91.813	Ictalurus_punctatus
ENSGACG00000002606	cnot1	100	95.874	ENSSTOG00000005490	CNOT1	92	90.311	Ictidomys_tridecemlineatus
ENSGACG00000002606	cnot1	100	95.267	ENSJJAG00000000633	Cnot1	92	89.847	Jaculus_jaculus
ENSGACG00000002606	cnot1	100	98.667	ENSKMAG00000006149	cnot1	91	96.154	Kryptolebias_marmoratus
ENSGACG00000002606	cnot1	94	97.133	ENSLBEG00000004740	cnot1	90	97.133	Labrus_bergylta
ENSGACG00000002606	cnot1	100	95.874	ENSLACG00000010869	CNOT1	91	90.333	Latimeria_chalumnae
ENSGACG00000002606	cnot1	100	98.182	ENSLOCG00000006324	cnot1	91	94.115	Lepisosteus_oculatus
ENSGACG00000002606	cnot1	100	95.631	ENSLAFG00000000098	CNOT1	91	90.111	Loxodonta_africana
ENSGACG00000002606	cnot1	100	95.752	ENSMFAG00000035888	CNOT1	92	90.450	Macaca_fascicularis
ENSGACG00000002606	cnot1	100	95.752	ENSMMUG00000014625	CNOT1	94	98.545	Macaca_mulatta
ENSGACG00000002606	cnot1	100	95.752	ENSMNEG00000031820	CNOT1	90	90.036	Macaca_nemestrina
ENSGACG00000002606	cnot1	100	91.817	ENSMLEG00000040933	CNOT1	92	89.244	Mandrillus_leucophaeus
ENSGACG00000002606	cnot1	100	97.937	ENSMAMG00000016524	cnot1	90	93.834	Mastacembelus_armatus
ENSGACG00000002606	cnot1	100	90.655	ENSMZEG00005016210	cnot1	90	90.324	Maylandia_zebra
ENSGACG00000002606	cnot1	100	95.510	ENSMGAG00000001908	CNOT1	91	90.032	Meleagris_gallopavo
ENSGACG00000002606	cnot1	99	95.471	ENSMAUG00000009731	-	99	95.471	Mesocricetus_auratus
ENSGACG00000002606	cnot1	100	95.874	ENSMICG00000007071	CNOT1	92	90.538	Microcebus_murinus
ENSGACG00000002606	cnot1	100	95.631	ENSMOCG00000017969	Cnot1	92	90.172	Microtus_ochrogaster
ENSGACG00000002606	cnot1	99	94.019	ENSMMOG00000019134	cnot1	91	94.019	Mola_mola
ENSGACG00000002606	cnot1	100	94.424	ENSMODG00000014199	CNOT1	91	89.875	Monodelphis_domestica
ENSGACG00000002606	cnot1	100	99.150	ENSMALG00000008645	cnot1	90	94.622	Monopterus_albus
ENSGACG00000002606	cnot1	100	95.631	MGP_CAROLIEiJ_G0031430	Cnot1	84	94.792	Mus_caroli
ENSGACG00000002606	cnot1	100	95.631	ENSMUSG00000036550	Cnot1	92	90.218	Mus_musculus
ENSGACG00000002606	cnot1	100	95.631	MGP_PahariEiJ_G0023028	Cnot1	92	90.218	Mus_pahari
ENSGACG00000002606	cnot1	100	95.631	MGP_SPRETEiJ_G0032549	Cnot1	92	90.218	Mus_spretus
ENSGACG00000002606	cnot1	100	95.752	ENSMPUG00000004830	CNOT1	91	90.241	Mustela_putorius_furo
ENSGACG00000002606	cnot1	100	95.752	ENSMLUG00000003728	CNOT1	91	89.917	Myotis_lucifugus
ENSGACG00000002606	cnot1	100	95.752	ENSNGAG00000018628	Cnot1	92	90.264	Nannospalax_galili
ENSGACG00000002606	cnot1	99	90.465	ENSNBRG00000019358	cnot1	90	88.471	Neolamprologus_brichardi
ENSGACG00000002606	cnot1	100	95.752	ENSNLEG00000003566	CNOT1	92	90.496	Nomascus_leucogenys
ENSGACG00000002606	cnot1	97	90.226	ENSMEUG00000006145	CNOT1	79	92.394	Notamacropus_eugenii
ENSGACG00000002606	cnot1	90	97.333	ENSOPRG00000005604	CNOT1	76	94.175	Ochotona_princeps
ENSGACG00000002606	cnot1	100	95.874	ENSODEG00000016337	CNOT1	92	90.403	Octodon_degus
ENSGACG00000002606	cnot1	100	99.394	ENSONIG00000007358	cnot1	91	96.106	Oreochromis_niloticus
ENSGACG00000002606	cnot1	100	95.631	ENSOANG00000012109	CNOT1	99	90.445	Ornithorhynchus_anatinus
ENSGACG00000002606	cnot1	100	95.752	ENSOCUG00000006911	CNOT1	91	90.241	Oryctolagus_cuniculus
ENSGACG00000002606	cnot1	100	98.545	ENSORLG00000013734	cnot1	91	95.324	Oryzias_latipes
ENSGACG00000002606	cnot1	99	95.362	ENSORLG00020017012	cnot1	92	95.501	Oryzias_latipes_hni
ENSGACG00000002606	cnot1	99	95.269	ENSORLG00015007091	cnot1	92	95.408	Oryzias_latipes_hsok
ENSGACG00000002606	cnot1	99	94.859	ENSOMEG00000015124	cnot1	92	94.175	Oryzias_melastigma
ENSGACG00000002606	cnot1	100	95.874	ENSOGAG00000000543	CNOT1	91	90.194	Otolemur_garnettii
ENSGACG00000002606	cnot1	100	95.752	ENSOARG00000001567	CNOT1	91	90.241	Ovis_aries
ENSGACG00000002606	cnot1	100	95.752	ENSPPAG00000022013	CNOT1	92	90.496	Pan_paniscus
ENSGACG00000002606	cnot1	100	95.752	ENSPPRG00000004867	CNOT1	91	90.241	Panthera_pardus
ENSGACG00000002606	cnot1	100	95.752	ENSPTIG00000012589	CNOT1	91	90.241	Panthera_tigris_altaica
ENSGACG00000002606	cnot1	100	94.946	ENSPTRG00000008183	CNOT1	92	90.496	Pan_troglodytes
ENSGACG00000002606	cnot1	100	91.957	ENSPANG00000020901	CNOT1	92	86.778	Papio_anubis
ENSGACG00000002606	cnot1	100	97.697	ENSPKIG00000023538	CNOT1	91	94.115	Paramormyrops_kingsleyae
ENSGACG00000002606	cnot1	100	91.253	ENSPKIG00000002914	CNOT1	90	87.570	Paramormyrops_kingsleyae
ENSGACG00000002606	cnot1	100	95.510	ENSPSIG00000005499	CNOT1	91	89.778	Pelodiscus_sinensis
ENSGACG00000002606	cnot1	66	99.817	ENSPMGG00000002161	-	100	99.817	Periophthalmus_magnuspinnatus
ENSGACG00000002606	cnot1	100	91.019	ENSPEMG00000014520	-	100	91.019	Peromyscus_maniculatus_bairdii
ENSGACG00000002606	cnot1	100	84.102	ENSPMAG00000009381	cnot1	91	78.008	Petromyzon_marinus
ENSGACG00000002606	cnot1	100	95.510	ENSPCIG00000007343	CNOT1	90	95.307	Phascolarctos_cinereus
ENSGACG00000002606	cnot1	97	98.250	ENSPFOG00000003497	cnot1	92	94.771	Poecilia_formosa
ENSGACG00000002606	cnot1	94	96.751	ENSPLAG00000014018	cnot1	90	96.751	Poecilia_latipinna
ENSGACG00000002606	cnot1	94	96.751	ENSPMEG00000005868	cnot1	90	96.751	Poecilia_mexicana
ENSGACG00000002606	cnot1	94	96.751	ENSPREG00000018793	cnot1	90	96.751	Poecilia_reticulata
ENSGACG00000002606	cnot1	100	95.874	ENSPPYG00000007410	CNOT1	91	90.287	Pongo_abelii
ENSGACG00000002606	cnot1	88	86.655	ENSPCAG00000003241	CNOT1	81	87.681	Procavia_capensis
ENSGACG00000002606	cnot1	100	94.946	ENSPCOG00000027139	CNOT1	92	90.492	Propithecus_coquereli
ENSGACG00000002606	cnot1	100	89.442	ENSPVAG00000004243	CNOT1	90	89.634	Pteropus_vampyrus
ENSGACG00000002606	cnot1	99	92.390	ENSPNYG00000012919	cnot1	90	92.529	Pundamilia_nyererei
ENSGACG00000002606	cnot1	100	97.573	ENSPNAG00000000246	cnot1	90	92.390	Pygocentrus_nattereri
ENSGACG00000002606	cnot1	100	95.510	ENSRNOG00000012271	Cnot1	91	89.917	Rattus_norvegicus
ENSGACG00000002606	cnot1	100	94.946	ENSRBIG00000044598	CNOT1	92	88.271	Rhinopithecus_bieti
ENSGACG00000002606	cnot1	100	95.752	ENSRROG00000000906	CNOT1	92	90.450	Rhinopithecus_roxellana
ENSGACG00000002606	cnot1	100	91.637	ENSSBOG00000029155	CNOT1	92	86.038	Saimiri_boliviensis_boliviensis
ENSGACG00000002606	cnot1	100	95.510	ENSSHAG00000012187	CNOT1	91	89.963	Sarcophilus_harrisii
ENSGACG00000002606	cnot1	100	92.727	ENSSFOG00015017614	cnot1	92	93.395	Scleropages_formosus
ENSGACG00000002606	cnot1	100	99.515	ENSSMAG00000013844	cnot1	98	96.662	Scophthalmus_maximus
ENSGACG00000002606	cnot1	99	93.930	ENSSDUG00000021491	cnot1	90	93.930	Seriola_dumerili
ENSGACG00000002606	cnot1	100	99.394	ENSSLDG00000014816	cnot1	91	97.370	Seriola_lalandi_dorsalis
ENSGACG00000002606	cnot1	78	97.695	ENSSARG00000000762	CNOT1	81	97.695	Sorex_araneus
ENSGACG00000002606	cnot1	100	99.515	ENSSPAG00000018802	cnot1	90	95.781	Stegastes_partitus
ENSGACG00000002606	cnot1	100	95.388	ENSSSCG00000002799	CNOT1	90	95.307	Sus_scrofa
ENSGACG00000002606	cnot1	100	95.510	ENSTGUG00000005919	CNOT1	91	89.792	Taeniopygia_guttata
ENSGACG00000002606	cnot1	100	98.908	ENSTRUG00000001784	cnot1	100	98.908	Takifugu_rubripes
ENSGACG00000002606	cnot1	100	97.697	ENSTNIG00000018706	cnot1	91	94.234	Tetraodon_nigroviridis
ENSGACG00000002606	cnot1	100	94.903	ENSTBEG00000000720	CNOT1	70	97.887	Tupaia_belangeri
ENSGACG00000002606	cnot1	100	95.752	ENSTTRG00000008460	CNOT1	86	88.748	Tursiops_truncatus
ENSGACG00000002606	cnot1	100	95.752	ENSUAMG00000009251	CNOT1	91	90.241	Ursus_americanus
ENSGACG00000002606	cnot1	100	95.752	ENSUMAG00000021291	CNOT1	91	90.241	Ursus_maritimus
ENSGACG00000002606	cnot1	100	92.840	ENSVPAG00000008846	CNOT1	87	90.688	Vicugna_pacos
ENSGACG00000002606	cnot1	100	93.826	ENSVVUG00000024037	CNOT1	90	95.307	Vulpes_vulpes
ENSGACG00000002606	cnot1	100	89.346	ENSXETG00000015900	cnot1	91	84.427	Xenopus_tropicalis
ENSGACG00000002606	cnot1	100	98.061	ENSXCOG00000013552	cnot1	90	93.231	Xiphophorus_couchianus
ENSGACG00000002606	cnot1	100	98.061	ENSXMAG00000006031	cnot1	90	93.278	Xiphophorus_maculatus