EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000002613 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1
Alias
C20orf21|FLJ20391
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
6269 bases
Position
chrgroupXII:229155-235423
Accession
15867
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000003433YTHPF04146.154.6e-4111
ENSGACP00000003428YTHPF04146.155.1e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000003444YTHDF1-2021821-ENSGACP00000003433607 (aa)-G3NDN3
ENSGACT00000003439YTHDF1-2011767-ENSGACP00000003428588 (aa)-G3NDM8
Gene Model
Click here to download ENSGACG00000002613's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002613's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000002613YTHDF19959.873ENSGACG00000002998ythdf39961.120
ENSGACG00000002613YTHDF19776.804ENSGACG00000012014ythdf19776.549
ENSGACG00000002613YTHDF19960.297ENSGACG00000009603ythdf210059.612
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000002613YTHDF110073.142ENSG00000149658YTHDF110073.649Homo_sapiens
ENSGACG00000002613YTHDF110090.476ENSAPOG00000010796YTHDF110088.776Acanthochromis_polyacanthus
ENSGACG00000002613YTHDF19777.108ENSAPOG00000004358ythdf19878.078Acanthochromis_polyacanthus
ENSGACG00000002613YTHDF19776.339ENSACIG00000011264ythdf19976.461Amphilophus_citrinellus
ENSGACG00000002613YTHDF110086.905ENSACIG00000020083YTHDF110086.078Amphilophus_citrinellus
ENSGACG00000002613YTHDF19976.471ENSAOCG00000022251ythdf19879.029Amphiprion_ocellaris
ENSGACG00000002613YTHDF19989.756ENSAOCG00000012567YTHDF19988.130Amphiprion_ocellaris
ENSGACG00000002613YTHDF19989.919ENSAPEG00000008750YTHDF19988.293Amphiprion_percula
ENSGACG00000002613YTHDF19776.717ENSAPEG00000021878ythdf19877.346Amphiprion_percula
ENSGACG00000002613YTHDF19776.789ENSATEG00000023840ythdf19977.196Anabas_testudineus
ENSGACG00000002613YTHDF19988.618ENSATEG00000005996YTHDF110086.587Anabas_testudineus
ENSGACG00000002613YTHDF19973.810ENSAPLG00000005985YTHDF19975.514Anas_platyrhynchos
ENSGACG00000002613YTHDF110075.000ENSACAG00000005560YTHDF110076.014Anolis_carolinensis
ENSGACG00000002613YTHDF110072.635ENSANAG00000034786-10073.480Aotus_nancymaae
ENSGACG00000002613YTHDF110060.169ENSANAG00000021022-10062.226Aotus_nancymaae
ENSGACG00000002613YTHDF110085.691ENSACLG00000025518YTHDF19986.039Astatotilapia_calliptera
ENSGACG00000002613YTHDF110070.462ENSBTAG00000010383YTHDF110072.175Bos_taurus
ENSGACG00000002613YTHDF110072.466ENSCJAG00000010056YTHDF110073.311Callithrix_jacchus
ENSGACG00000002613YTHDF19171.349ENSCAFG00000012772YTHDF19973.383Canis_familiaris
ENSGACG00000002613YTHDF19171.349ENSCAFG00020001214YTHDF19973.383Canis_lupus_dingo
ENSGACG00000002613YTHDF110071.959ENSCHIG00000026494YTHDF110071.644Capra_hircus
ENSGACG00000002613YTHDF19970.017ENSTSYG00000033436YTHDF19971.644Carlito_syrichta
ENSGACG00000002613YTHDF19770.312ENSCAPG00000002544YTHDF19471.675Cavia_aperea
ENSGACG00000002613YTHDF110071.574ENSCPOG00000010202YTHDF110073.064Cavia_porcellus
ENSGACG00000002613YTHDF110071.791ENSCCAG00000024650YTHDF110073.480Cebus_capucinus
ENSGACG00000002613YTHDF110072.804ENSCATG00000033272YTHDF110073.818Cercocebus_atys
ENSGACG00000002613YTHDF110071.959ENSCLAG00000005989YTHDF110073.480Chinchilla_lanigera
ENSGACG00000002613YTHDF110072.804ENSCSAG00000016266YTHDF110073.818Chlorocebus_sabaeus
ENSGACG00000002613YTHDF110074.662ENSCPBG00000027183YTHDF110075.000Chrysemys_picta_bellii
ENSGACG00000002613YTHDF19972.945ENSCANG00000029082YTHDF19873.630Colobus_angolensis_palliatus
ENSGACG00000002613YTHDF110072.466ENSCGRG00001016568Ythdf110074.662Cricetulus_griseus_chok1gshd
ENSGACG00000002613YTHDF19872.213ENSCGRG00000009207Ythdf110074.443Cricetulus_griseus_crigri
ENSGACG00000002613YTHDF19776.789ENSCSEG00000020623YTHDF19977.474Cynoglossus_semilaevis
ENSGACG00000002613YTHDF19985.854ENSCVAG00000014378YTHDF19986.851Cyprinodon_variegatus
ENSGACG00000002613YTHDF19975.856ENSCVAG00000017940ythdf19876.541Cyprinodon_variegatus
ENSGACG00000002613YTHDF110077.331ENSDARG00000016447ythdf110079.266Danio_rerio
ENSGACG00000002613YTHDF110071.959ENSDNOG00000043590YTHDF110073.524Dasypus_novemcinctus
ENSGACG00000002613YTHDF19769.739ENSDORG00000002879Ythdf19472.145Dipodomys_ordii
ENSGACG00000002613YTHDF18354.598ENSETEG00000017860-9854.598Echinops_telfairi
ENSGACG00000002613YTHDF110072.973ENSEASG00005023186YTHDF110074.368Equus_asinus_asinus
ENSGACG00000002613YTHDF19872.680ENSECAG00000019475YTHDF110073.665Equus_caballus
ENSGACG00000002613YTHDF19372.080ENSEEUG00000007461YTHDF110073.905Erinaceus_europaeus
ENSGACG00000002613YTHDF19976.589ENSELUG00000001906YTHDF19981.835Esox_lucius
ENSGACG00000002613YTHDF19979.378ENSELUG00000022768ythdf19979.869Esox_lucius
ENSGACG00000002613YTHDF110072.128ENSFCAG00000008917YTHDF110073.950Felis_catus
ENSGACG00000002613YTHDF110074.324ENSFALG00000010463YTHDF110075.338Ficedula_albicollis
ENSGACG00000002613YTHDF110071.453ENSFDAG00000019602YTHDF110073.142Fukomys_damarensis
ENSGACG00000002613YTHDF19987.967ENSFHEG00000002540YTHDF19987.338Fundulus_heteroclitus
ENSGACG00000002613YTHDF19977.148ENSFHEG00000023218ythdf19976.780Fundulus_heteroclitus
ENSGACG00000002613YTHDF18696.296ENSGMOG00000019610ythdf18493.782Gadus_morhua
ENSGACG00000002613YTHDF110074.324ENSGALG00000005745YTHDF110075.507Gallus_gallus
ENSGACG00000002613YTHDF19991.000ENSGAFG00000021100YTHDF19989.667Gambusia_affinis
ENSGACG00000002613YTHDF110075.169ENSGAGG00000003007YTHDF110075.507Gopherus_agassizii
ENSGACG00000002613YTHDF110073.480ENSGGOG00000008340YTHDF110073.986Gorilla_gorilla
ENSGACG00000002613YTHDF110086.174ENSHBUG00000004875YTHDF19986.526Haplochromis_burtoni
ENSGACG00000002613YTHDF19777.066ENSHBUG00000011284ythdf19976.884Haplochromis_burtoni
ENSGACG00000002613YTHDF110071.453ENSHGLG00000006585YTHDF110073.142Heterocephalus_glaber_female
ENSGACG00000002613YTHDF110071.453ENSHGLG00100004683YTHDF110073.142Heterocephalus_glaber_male
ENSGACG00000002613YTHDF19974.026ENSHCOG00000008866ythdf19974.673Hippocampus_comes
ENSGACG00000002613YTHDF110083.762ENSHCOG00000011303YTHDF110086.101Hippocampus_comes
ENSGACG00000002613YTHDF110076.375ENSIPUG00000000425Ythdf110077.273Ictalurus_punctatus
ENSGACG00000002613YTHDF19970.326ENSSTOG00000023001YTHDF19972.774Ictidomys_tridecemlineatus
ENSGACG00000002613YTHDF19871.870ENSJJAG00000013589Ythdf110073.585Jaculus_jaculus
ENSGACG00000002613YTHDF19777.098ENSKMAG00000005595ythdf19977.397Kryptolebias_marmoratus
ENSGACG00000002613YTHDF19987.520ENSKMAG00000017472YTHDF19987.196Kryptolebias_marmoratus
ENSGACG00000002613YTHDF110089.286ENSLBEG00000012068YTHDF110088.095Labrus_bergylta
ENSGACG00000002613YTHDF19778.284ENSLBEG00000014105ythdf19677.703Labrus_bergylta
ENSGACG00000002613YTHDF19674.165ENSLACG00000014195YTHDF19874.165Latimeria_chalumnae
ENSGACG00000002613YTHDF110076.403ENSLOCG00000005020ythdf110076.403Lepisosteus_oculatus
ENSGACG00000002613YTHDF110073.986ENSLAFG00000008884YTHDF110073.818Loxodonta_africana
ENSGACG00000002613YTHDF110072.804ENSMFAG00000042868YTHDF110073.818Macaca_fascicularis
ENSGACG00000002613YTHDF110072.804ENSMMUG00000009227YTHDF110073.818Macaca_mulatta
ENSGACG00000002613YTHDF110072.804ENSMNEG00000030851YTHDF110073.818Macaca_nemestrina
ENSGACG00000002613YTHDF19872.727ENSMLEG00000009252YTHDF110073.413Mandrillus_leucophaeus
ENSGACG00000002613YTHDF19775.261ENSMAMG00000024255ythdf19973.411Mastacembelus_armatus
ENSGACG00000002613YTHDF110087.245ENSMAMG00000011072YTHDF110086.418Mastacembelus_armatus
ENSGACG00000002613YTHDF110086.174ENSMZEG00005023596YTHDF19986.526Maylandia_zebra
ENSGACG00000002613YTHDF19777.431ENSMZEG00005026397ythdf19977.211Maylandia_zebra
ENSGACG00000002613YTHDF19973.390ENSMGAG00000006139YTHDF19975.342Meleagris_gallopavo
ENSGACG00000002613YTHDF110072.128ENSMAUG00000017660Ythdf110074.324Mesocricetus_auratus
ENSGACG00000002613YTHDF110072.391ENSMICG00000032266YTHDF110074.074Microcebus_murinus
ENSGACG00000002613YTHDF110072.128ENSMOCG00000013573Ythdf110074.155Microtus_ochrogaster
ENSGACG00000002613YTHDF19775.296ENSMMOG00000017500ythdf19776.033Mola_mola
ENSGACG00000002613YTHDF19788.591ENSMMOG00000020467YTHDF19587.437Mola_mola
ENSGACG00000002613YTHDF19171.558ENSMODG00000016842YTHDF110073.937Monodelphis_domestica
ENSGACG00000002613YTHDF110086.294ENSMALG00000022209YTHDF110086.294Monopterus_albus
ENSGACG00000002613YTHDF19776.248ENSMALG00000015672ythdf19875.083Monopterus_albus
ENSGACG00000002613YTHDF110072.297MGP_CAROLIEiJ_G0024790Ythdf110074.324Mus_caroli
ENSGACG00000002613YTHDF110072.297ENSMUSG00000038848Ythdf110074.324Mus_musculus
ENSGACG00000002613YTHDF110072.297MGP_PahariEiJ_G0026237Ythdf110074.324Mus_pahari
ENSGACG00000002613YTHDF110072.297MGP_SPRETEiJ_G0025715Ythdf110074.324Mus_spretus
ENSGACG00000002613YTHDF19169.444ENSMPUG00000008111YTHDF110071.218Mustela_putorius_furo
ENSGACG00000002613YTHDF19873.356ENSMLUG00000002241YTHDF19772.837Myotis_lucifugus
ENSGACG00000002613YTHDF110072.466ENSNGAG00000000334Ythdf110074.324Nannospalax_galili
ENSGACG00000002613YTHDF19775.879ENSNBRG00000008213ythdf19876.519Neolamprologus_brichardi
ENSGACG00000002613YTHDF19689.673ENSNBRG00000015321YTHDF19888.889Neolamprologus_brichardi
ENSGACG00000002613YTHDF19564.483ENSOPRG00000001758-9866.547Ochotona_princeps
ENSGACG00000002613YTHDF110070.946ENSODEG00000004380-10072.635Octodon_degus
ENSGACG00000002613YTHDF19759.370ENSODEG00000000074-10061.513Octodon_degus
ENSGACG00000002613YTHDF19776.351ENSONIG00000016799ythdf110076.059Oreochromis_niloticus
ENSGACG00000002613YTHDF110074.493ENSOANG00000003723YTHDF110075.169Ornithorhynchus_anatinus
ENSGACG00000002613YTHDF19985.691ENSORLG00000009739YTHDF19986.609Oryzias_latipes
ENSGACG00000002613YTHDF19774.667ENSORLG00000014665YTHDF19774.309Oryzias_latipes
ENSGACG00000002613YTHDF19985.203ENSORLG00020001332YTHDF19985.565Oryzias_latipes_hni
ENSGACG00000002613YTHDF19775.125ENSORLG00020000307ythdf19774.756Oryzias_latipes_hni
ENSGACG00000002613YTHDF19774.958ENSORLG00015006302ythdf19774.593Oryzias_latipes_hsok
ENSGACG00000002613YTHDF19987.500ENSORLG00015018321YTHDF19887.354Oryzias_latipes_hsok
ENSGACG00000002613YTHDF19776.910ENSOMEG00000002941YTHDF19877.241Oryzias_melastigma
ENSGACG00000002613YTHDF19985.854ENSOMEG00000011843YTHDF19986.179Oryzias_melastigma
ENSGACG00000002613YTHDF110071.886ENSOGAG00000000480YTHDF110072.222Otolemur_garnettii
ENSGACG00000002613YTHDF19969.349ENSOARG00000011639YTHDF19869.521Ovis_aries
ENSGACG00000002613YTHDF19973.459ENSPPAG00000023277YTHDF110073.973Pan_paniscus
ENSGACG00000002613YTHDF110072.466ENSPPRG00000020805YTHDF110074.662Panthera_pardus
ENSGACG00000002613YTHDF18578.947ENSPTIG00000017355YTHDF19678.740Panthera_tigris_altaica
ENSGACG00000002613YTHDF110073.480ENSPTRG00000013730YTHDF110073.986Pan_troglodytes
ENSGACG00000002613YTHDF110072.804ENSPANG00000021472YTHDF110073.818Papio_anubis
ENSGACG00000002613YTHDF110072.835ENSPKIG00000005427ythdf110073.356Paramormyrops_kingsleyae
ENSGACG00000002613YTHDF19974.446ENSPKIG00000005026YTHDF19874.617Paramormyrops_kingsleyae
ENSGACG00000002613YTHDF19774.697ENSPSIG00000005529YTHDF19775.217Pelodiscus_sinensis
ENSGACG00000002613YTHDF19887.059ENSPMGG00000009101YTHDF19987.899Periophthalmus_magnuspinnatus
ENSGACG00000002613YTHDF19476.543ENSPMGG00000015328ythdf19777.913Periophthalmus_magnuspinnatus
ENSGACG00000002613YTHDF19871.870ENSPEMG00000020199Ythdf110074.099Peromyscus_maniculatus_bairdii
ENSGACG00000002613YTHDF19973.288ENSPCIG00000017170YTHDF110074.492Phascolarctos_cinereus
ENSGACG00000002613YTHDF110076.936ENSPFOG00000005405ythdf19876.393Poecilia_formosa
ENSGACG00000002613YTHDF19988.618ENSPLAG00000006298YTHDF19987.642Poecilia_latipinna
ENSGACG00000002613YTHDF19978.388ENSPLAG00000006653ythdf19978.045Poecilia_latipinna
ENSGACG00000002613YTHDF19977.568ENSPMEG00000023753ythdf19977.911Poecilia_mexicana
ENSGACG00000002613YTHDF19988.618ENSPMEG00000020969-9987.642Poecilia_mexicana
ENSGACG00000002613YTHDF19788.284ENSPREG00000017662YTHDF19887.294Poecilia_reticulata
ENSGACG00000002613YTHDF19978.731ENSPREG00000002173ythdf19978.388Poecilia_reticulata
ENSGACG00000002613YTHDF18387.204ENSPPYG00000011226YTHDF110087.204Pongo_abelii
ENSGACG00000002613YTHDF18969.776ENSPCAG00000002452YTHDF110070.240Procavia_capensis
ENSGACG00000002613YTHDF110072.128ENSPCOG00000025969YTHDF110073.986Propithecus_coquereli
ENSGACG00000002613YTHDF19867.581ENSPVAG00000017568YTHDF19868.467Pteropus_vampyrus
ENSGACG00000002613YTHDF110086.174ENSPNYG00000002266YTHDF19986.526Pundamilia_nyererei
ENSGACG00000002613YTHDF19777.431ENSPNYG00000014007ythdf19977.211Pundamilia_nyererei
ENSGACG00000002613YTHDF110077.742ENSPNAG00000012447ythdf110080.480Pygocentrus_nattereri
ENSGACG00000002613YTHDF110072.466ENSRNOG00000027015Ythdf110074.155Rattus_norvegicus
ENSGACG00000002613YTHDF110071.622ENSRBIG00000044959YTHDF110072.466Rhinopithecus_bieti
ENSGACG00000002613YTHDF110071.622ENSRROG00000033014YTHDF110072.466Rhinopithecus_roxellana
ENSGACG00000002613YTHDF19771.478ENSSBOG00000027278YTHDF110071.956Saimiri_boliviensis_boliviensis
ENSGACG00000002613YTHDF19972.619ENSSHAG00000010430YTHDF18974.320Sarcophilus_harrisii
ENSGACG00000002613YTHDF110076.568ENSSFOG00015000284ythdf110077.213Scleropages_formosus
ENSGACG00000002613YTHDF17490.446ENSSMAG00000013715ythdf19185.000Scophthalmus_maximus
ENSGACG00000002613YTHDF19795.455ENSSMAG00000007635YTHDF19788.007Scophthalmus_maximus
ENSGACG00000002613YTHDF19986.792ENSSDUG00000015823YTHDF19985.420Seriola_dumerili
ENSGACG00000002613YTHDF19776.764ENSSDUG00000000435ythdf19876.617Seriola_dumerili
ENSGACG00000002613YTHDF19775.626ENSSLDG00000024948ythdf19874.921Seriola_lalandi_dorsalis
ENSGACG00000002613YTHDF19987.520ENSSLDG00000001054YTHDF19794.286Seriola_lalandi_dorsalis
ENSGACG00000002613YTHDF19173.616ENSSPUG00000015143YTHDF110074.539Sphenodon_punctatus
ENSGACG00000002613YTHDF19988.961ENSSPAG00000003666YTHDF19987.338Stegastes_partitus
ENSGACG00000002613YTHDF19775.000ENSSPAG00000014989ythdf19876.252Stegastes_partitus
ENSGACG00000002613YTHDF19974.486ENSTGUG00000007565YTHDF110075.514Taeniopygia_guttata
ENSGACG00000002613YTHDF19976.480ENSTRUG00000004288ythdf19976.672Takifugu_rubripes
ENSGACG00000002613YTHDF19689.022ENSTRUG00000005049YTHDF19887.960Takifugu_rubripes
ENSGACG00000002613YTHDF110084.184ENSTNIG00000003975YTHDF110082.823Tetraodon_nigroviridis
ENSGACG00000002613YTHDF19975.338ENSTNIG00000012490ythdf19975.758Tetraodon_nigroviridis
ENSGACG00000002613YTHDF19772.174ENSUAMG00000011021YTHDF110073.616Ursus_americanus
ENSGACG00000002613YTHDF19171.402ENSUMAG00000022290YTHDF110073.616Ursus_maritimus
ENSGACG00000002613YTHDF19170.980ENSVVUG00000015275YTHDF19973.567Vulpes_vulpes
ENSGACG00000002613YTHDF19774.390ENSXETG00000027086ythdf19774.527Xenopus_tropicalis
ENSGACG00000002613YTHDF19678.975ENSXCOG00000002490ythdf19478.622Xiphophorus_couchianus
ENSGACG00000002613YTHDF19887.356ENSXCOG00000008115YTHDF19986.371Xiphophorus_couchianus
ENSGACG00000002613YTHDF19988.293ENSXMAG00000015644YTHDF19987.317Xiphophorus_maculatus
ENSGACG00000002613YTHDF110076.936ENSXMAG00000008525ythdf19678.445Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us