EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002618 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3290 bases
Position: chrgroupVI:1041607-1044896
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003436	Nop16	PF09420.10	3.4e-17	1	1
ENSGACP00000003443	Nop16	PF09420.10	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003448	-	877	-	ENSGACP00000003436	170 (aa)	-	G3NDN6
ENSGACT00000003455	-	865	-	ENSGACP00000003443	172 (aa)	-	G3NDP3

Gene Model

Click here to download ENSGACG00000002618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002618	-	100	92.000	ENSGACG00000003122	-	100	98.291
ENSGACG00000002618	-	98	84.118	ENSGACG00000020810	nop16	100	84.118
ENSGACG00000002618	-	100	93.605	ENSGACG00000020819	-	100	93.605

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002618	-	99	70.000	ENSAPOG00000010682	-	97	70.000	Acanthochromis_polyacanthus
ENSGACG00000002618	-	98	52.353	ENSAMEG00000006988	-	96	52.353	Ailuropoda_melanoleuca
ENSGACG00000002618	-	100	64.535	ENSACIG00000019263	nop16	97	64.535	Amphilophus_citrinellus
ENSGACG00000002618	-	99	70.588	ENSAOCG00000005504	nop16	97	70.588	Amphiprion_ocellaris
ENSGACG00000002618	-	99	70.588	ENSAPEG00000006605	nop16	97	70.588	Amphiprion_percula
ENSGACG00000002618	-	100	75.000	ENSATEG00000014089	nop16	97	75.000	Anabas_testudineus
ENSGACG00000002618	-	98	55.882	ENSACAG00000006333	-	96	55.882	Anolis_carolinensis
ENSGACG00000002618	-	98	46.471	ENSANAG00000027410	-	95	46.471	Aotus_nancymaae
ENSGACG00000002618	-	98	51.176	ENSANAG00000015743	-	95	51.176	Aotus_nancymaae
ENSGACG00000002618	-	100	66.279	ENSACLG00000025227	nop16	97	66.279	Astatotilapia_calliptera
ENSGACG00000002618	-	98	50.000	ENSAMXG00000006843	nop16	91	50.318	Astyanax_mexicanus
ENSGACG00000002618	-	98	53.529	ENSBTAG00000010734	NOP16	96	53.529	Bos_taurus
ENSGACG00000002618	-	67	30.935	WBGene00013958	ZK265.6	83	30.380	Caenorhabditis_elegans
ENSGACG00000002618	-	98	52.353	ENSCAFG00000016694	NOP16	96	52.353	Canis_familiaris
ENSGACG00000002618	-	98	52.353	ENSCAFG00020011505	-	90	52.353	Canis_lupus_dingo
ENSGACG00000002618	-	98	53.529	ENSCHIG00000022082	-	96	53.529	Capra_hircus
ENSGACG00000002618	-	98	45.882	ENSTSYG00000032690	-	95	45.882	Carlito_syrichta
ENSGACG00000002618	-	98	52.941	ENSTSYG00000030409	-	96	52.941	Carlito_syrichta
ENSGACG00000002618	-	98	52.353	ENSCPOG00000026072	-	96	52.353	Cavia_porcellus
ENSGACG00000002618	-	92	51.875	ENSCCAG00000026775	-	93	51.875	Cebus_capucinus
ENSGACG00000002618	-	98	51.765	ENSCLAG00000015405	-	96	51.765	Chinchilla_lanigera
ENSGACG00000002618	-	98	53.529	ENSCSAG00000009400	-	96	53.529	Chlorocebus_sabaeus
ENSGACG00000002618	-	98	53.409	ENSCPBG00000022647	-	96	53.409	Chrysemys_picta_bellii
ENSGACG00000002618	-	98	37.931	ENSCING00000006179	-	87	37.037	Ciona_intestinalis
ENSGACG00000002618	-	98	38.095	ENSCSAVG00000000269	-	84	37.086	Ciona_savignyi
ENSGACG00000002618	-	98	53.529	ENSCGRG00001004259	Nop16	96	53.529	Cricetulus_griseus_chok1gshd
ENSGACG00000002618	-	98	53.529	ENSCGRG00000010975	Nop16	96	53.529	Cricetulus_griseus_crigri
ENSGACG00000002618	-	99	60.355	ENSCSEG00000020523	nop16	91	60.510	Cynoglossus_semilaevis
ENSGACG00000002618	-	100	68.605	ENSCVAG00000020140	nop16	97	68.605	Cyprinodon_variegatus
ENSGACG00000002618	-	99	51.445	ENSDARG00000044402	nop16	91	50.932	Danio_rerio
ENSGACG00000002618	-	98	53.529	ENSDNOG00000042890	-	95	53.529	Dasypus_novemcinctus
ENSGACG00000002618	-	99	52.907	ENSDORG00000008872	Nop16	96	52.941	Dipodomys_ordii
ENSGACG00000002618	-	96	39.884	ENSEBUG00000011196	nop16	88	39.130	Eptatretus_burgeri
ENSGACG00000002618	-	98	52.941	ENSEASG00005011988	-	96	52.941	Equus_asinus_asinus
ENSGACG00000002618	-	98	53.529	ENSECAG00000021354	NOP16	96	53.529	Equus_caballus
ENSGACG00000002618	-	98	59.649	ENSELUG00000000401	nop16	90	59.748	Esox_lucius
ENSGACG00000002618	-	98	53.529	ENSFCAG00000025473	-	96	53.529	Felis_catus
ENSGACG00000002618	-	98	49.123	ENSFALG00000008553	-	96	49.123	Ficedula_albicollis
ENSGACG00000002618	-	98	51.176	ENSFDAG00000000193	-	96	51.176	Fukomys_damarensis
ENSGACG00000002618	-	100	68.605	ENSFHEG00000016452	nop16	97	68.605	Fundulus_heteroclitus
ENSGACG00000002618	-	98	50.581	ENSGALG00000003355	-	96	50.581	Gallus_gallus
ENSGACG00000002618	-	86	66.438	ENSGAFG00000011616	nop16	81	66.438	Gambusia_affinis
ENSGACG00000002618	-	100	65.116	ENSHBUG00000013527	nop16	97	65.116	Haplochromis_burtoni
ENSGACG00000002618	-	98	52.353	ENSHGLG00000013437	NOP16	96	52.353	Heterocephalus_glaber_female
ENSGACG00000002618	-	98	52.353	ENSHGLG00100011375	NOP16	96	52.353	Heterocephalus_glaber_male
ENSGACG00000002618	-	100	65.698	ENSHCOG00000019999	nop16	91	67.500	Hippocampus_comes
ENSGACG00000002618	-	98	54.217	ENSIPUG00000006682	nop16	90	54.140	Ictalurus_punctatus
ENSGACG00000002618	-	98	52.326	ENSSTOG00000004869	-	96	52.326	Ictidomys_tridecemlineatus
ENSGACG00000002618	-	98	52.353	ENSJJAG00000017655	Nop16	96	52.353	Jaculus_jaculus
ENSGACG00000002618	-	100	69.186	ENSKMAG00000006164	nop16	97	69.186	Kryptolebias_marmoratus
ENSGACG00000002618	-	100	76.744	ENSLBEG00000018355	nop16	79	76.744	Labrus_bergylta
ENSGACG00000002618	-	98	57.647	ENSLACG00000014884	nop16	96	57.647	Latimeria_chalumnae
ENSGACG00000002618	-	99	61.404	ENSLOCG00000012348	nop16	95	61.404	Lepisosteus_oculatus
ENSGACG00000002618	-	98	53.529	ENSLAFG00000017886	-	95	53.529	Loxodonta_africana
ENSGACG00000002618	-	100	70.930	ENSMAMG00000021868	nop16	97	70.930	Mastacembelus_armatus
ENSGACG00000002618	-	100	66.279	ENSMZEG00005012112	nop16	97	66.279	Maylandia_zebra
ENSGACG00000002618	-	54	52.174	ENSMGAG00000004726	-	90	52.174	Meleagris_gallopavo
ENSGACG00000002618	-	54	56.522	ENSMAUG00000009852	-	87	56.522	Mesocricetus_auratus
ENSGACG00000002618	-	92	50.314	ENSMAUG00000015569	-	93	50.318	Mesocricetus_auratus
ENSGACG00000002618	-	98	52.941	ENSMOCG00000020788	Nop16	96	52.941	Microtus_ochrogaster
ENSGACG00000002618	-	99	72.353	ENSMMOG00000016054	nop16	99	72.353	Mola_mola
ENSGACG00000002618	-	98	55.556	ENSMODG00000005214	-	96	55.556	Monodelphis_domestica
ENSGACG00000002618	-	100	74.419	ENSMALG00000021263	nop16	97	74.419	Monopterus_albus
ENSGACG00000002618	-	98	52.353	MGP_CAROLIEiJ_G0018538	Nop16	96	52.353	Mus_caroli
ENSGACG00000002618	-	98	52.941	ENSMUSG00000025869	Nop16	96	52.941	Mus_musculus
ENSGACG00000002618	-	98	53.529	MGP_PahariEiJ_G0019603	Nop16	96	53.529	Mus_pahari
ENSGACG00000002618	-	98	52.941	MGP_SPRETEiJ_G0019418	Nop16	96	52.941	Mus_spretus
ENSGACG00000002618	-	98	52.941	ENSMPUG00000012552	-	96	52.941	Mustela_putorius_furo
ENSGACG00000002618	-	98	51.176	ENSMPUG00000016964	-	89	51.266	Mustela_putorius_furo
ENSGACG00000002618	-	98	51.765	ENSMLUG00000003504	-	95	51.765	Myotis_lucifugus
ENSGACG00000002618	-	98	54.118	ENSNGAG00000018045	Nop16	96	54.118	Nannospalax_galili
ENSGACG00000002618	-	100	63.953	ENSNBRG00000015181	nop16	98	63.953	Neolamprologus_brichardi
ENSGACG00000002618	-	98	51.765	ENSODEG00000009586	-	96	51.765	Octodon_degus
ENSGACG00000002618	-	100	67.442	ENSONIG00000016417	nop16	97	67.442	Oreochromis_niloticus
ENSGACG00000002618	-	98	53.529	ENSOCUG00000013171	-	96	53.529	Oryctolagus_cuniculus
ENSGACG00000002618	-	100	64.706	ENSORLG00000026611	nop16	97	64.706	Oryzias_latipes
ENSGACG00000002618	-	100	67.647	ENSOMEG00000023001	nop16	97	67.647	Oryzias_melastigma
ENSGACG00000002618	-	98	52.941	ENSOGAG00000000824	-	96	52.941	Otolemur_garnettii
ENSGACG00000002618	-	98	53.529	ENSOARG00000002165	-	96	53.529	Ovis_aries
ENSGACG00000002618	-	98	52.941	ENSPPAG00000035473	-	96	52.941	Pan_paniscus
ENSGACG00000002618	-	98	53.529	ENSPPRG00000016600	-	96	53.529	Panthera_pardus
ENSGACG00000002618	-	98	53.529	ENSPTIG00000011708	-	96	53.529	Panthera_tigris_altaica
ENSGACG00000002618	-	98	52.941	ENSPTRG00000017560	NOP16	96	52.941	Pan_troglodytes
ENSGACG00000002618	-	98	56.213	ENSPKIG00000009587	nop16	95	56.213	Paramormyrops_kingsleyae
ENSGACG00000002618	-	77	56.618	ENSPSIG00000013546	-	94	56.618	Pelodiscus_sinensis
ENSGACG00000002618	-	98	68.421	ENSPMGG00000003443	nop16	99	68.421	Periophthalmus_magnuspinnatus
ENSGACG00000002618	-	98	52.941	ENSPEMG00000020268	Nop16	96	52.941	Peromyscus_maniculatus_bairdii
ENSGACG00000002618	-	98	53.801	ENSPCIG00000009782	-	96	53.801	Phascolarctos_cinereus
ENSGACG00000002618	-	100	69.767	ENSPFOG00000010549	nop16	97	69.767	Poecilia_formosa
ENSGACG00000002618	-	81	70.803	ENSPLAG00000007124	nop16	71	70.803	Poecilia_latipinna
ENSGACG00000002618	-	100	70.349	ENSPMEG00000008611	nop16	97	70.349	Poecilia_mexicana
ENSGACG00000002618	-	100	68.605	ENSPREG00000012940	nop16	97	68.605	Poecilia_reticulata
ENSGACG00000002618	-	98	52.941	ENSPPYG00000016070	-	96	52.941	Pongo_abelii
ENSGACG00000002618	-	100	65.698	ENSPNYG00000013529	nop16	97	65.698	Pundamilia_nyererei
ENSGACG00000002618	-	98	51.807	ENSPNAG00000016233	nop16	92	52.229	Pygocentrus_nattereri
ENSGACG00000002618	-	98	51.765	ENSRNOG00000017284	Nop16	96	51.765	Rattus_norvegicus
ENSGACG00000002618	-	98	54.386	ENSSHAG00000001724	-	96	54.386	Sarcophilus_harrisii
ENSGACG00000002618	-	93	55.625	ENSSFOG00015010537	nop16	72	55.975	Scleropages_formosus
ENSGACG00000002618	-	100	75.581	ENSSDUG00000022349	nop16	97	75.581	Seriola_dumerili
ENSGACG00000002618	-	100	76.163	ENSSLDG00000025171	nop16	97	76.163	Seriola_lalandi_dorsalis
ENSGACG00000002618	-	75	43.077	ENSSARG00000006699	-	61	43.077	Sorex_araneus
ENSGACG00000002618	-	98	55.882	ENSSPUG00000006508	-	95	55.882	Sphenodon_punctatus
ENSGACG00000002618	-	99	71.345	ENSSPAG00000011772	nop16	97	71.345	Stegastes_partitus
ENSGACG00000002618	-	98	54.118	ENSSSCG00000029577	-	96	54.118	Sus_scrofa
ENSGACG00000002618	-	98	50.581	ENSTGUG00000000543	-	96	50.581	Taeniopygia_guttata
ENSGACG00000002618	-	99	67.059	ENSTRUG00000020255	nop16	96	67.059	Takifugu_rubripes
ENSGACG00000002618	-	100	69.186	ENSTNIG00000007616	nop16	97	69.186	Tetraodon_nigroviridis
ENSGACG00000002618	-	98	51.765	ENSUAMG00000005139	-	96	51.765	Ursus_americanus
ENSGACG00000002618	-	98	52.353	ENSVVUG00000001697	-	90	52.353	Vulpes_vulpes
ENSGACG00000002618	-	98	49.398	ENSXETG00000022342	nop16	91	50.649	Xenopus_tropicalis
ENSGACG00000002618	-	99	68.421	ENSXCOG00000018829	nop16	98	68.421	Xiphophorus_couchianus
ENSGACG00000002618	-	100	69.767	ENSXMAG00000029113	nop16	97	69.767	Xiphophorus_maculatus