EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002646 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 17484 bases
Position: chrgroupXIX:2176796-2194279
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003465	CPSF_A	PF03178.15	4.8e-100	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003477	-	3657	-	ENSGACP00000003465	1218 (aa)	-	G3NDR5

Gene Model

Click here to download ENSGACG00000002646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002646	sf3b3	100	93.021	ENSG00000189091	SF3B3	100	98.246	Homo_sapiens
ENSGACG00000002646	sf3b3	96	97.526	ENSAPOG00000006172	sf3b3	98	97.526	Acanthochromis_polyacanthus
ENSGACG00000002646	sf3b3	100	92.875	ENSAMEG00000002187	SF3B3	100	92.875	Ailuropoda_melanoleuca
ENSGACG00000002646	sf3b3	92	95.183	ENSACIG00000016487	sf3b3	100	95.183	Amphilophus_citrinellus
ENSGACG00000002646	sf3b3	100	97.701	ENSAOCG00000007158	sf3b3	100	97.701	Amphiprion_ocellaris
ENSGACG00000002646	sf3b3	100	97.701	ENSAPEG00000022786	sf3b3	100	97.701	Amphiprion_percula
ENSGACG00000002646	sf3b3	100	98.030	ENSATEG00000013708	sf3b3	100	98.030	Anabas_testudineus
ENSGACG00000002646	sf3b3	81	93.198	ENSAPLG00000004996	SF3B3	99	93.198	Anas_platyrhynchos
ENSGACG00000002646	sf3b3	100	93.103	ENSACAG00000001817	SF3B3	100	93.103	Anolis_carolinensis
ENSGACG00000002646	sf3b3	100	93.021	ENSANAG00000028001	SF3B3	100	93.021	Aotus_nancymaae
ENSGACG00000002646	sf3b3	96	97.696	ENSACLG00000022555	sf3b3	98	97.696	Astatotilapia_calliptera
ENSGACG00000002646	sf3b3	100	97.209	ENSAMXG00000003410	sf3b3	100	97.209	Astyanax_mexicanus
ENSGACG00000002646	sf3b3	100	93.021	ENSBTAG00000010627	SF3B3	100	93.021	Bos_taurus
ENSGACG00000002646	sf3b3	100	59.935	WBGene00019323	teg-4	100	59.968	Caenorhabditis_elegans
ENSGACG00000002646	sf3b3	100	93.021	ENSCJAG00000014773	SF3B3	99	93.021	Callithrix_jacchus
ENSGACG00000002646	sf3b3	100	93.103	ENSCAFG00000020151	SF3B3	100	93.103	Canis_familiaris
ENSGACG00000002646	sf3b3	100	93.103	ENSCAFG00020020912	SF3B3	100	93.103	Canis_lupus_dingo
ENSGACG00000002646	sf3b3	100	93.103	ENSCHIG00000019822	SF3B3	100	93.103	Capra_hircus
ENSGACG00000002646	sf3b3	100	93.021	ENSTSYG00000007910	SF3B3	100	93.021	Carlito_syrichta
ENSGACG00000002646	sf3b3	84	78.947	ENSCAPG00000001484	SF3B3	92	78.947	Cavia_aperea
ENSGACG00000002646	sf3b3	100	91.708	ENSCPOG00000000586	SF3B3	100	91.708	Cavia_porcellus
ENSGACG00000002646	sf3b3	100	93.021	ENSCCAG00000017736	SF3B3	100	93.021	Cebus_capucinus
ENSGACG00000002646	sf3b3	100	93.021	ENSCATG00000036562	SF3B3	100	93.021	Cercocebus_atys
ENSGACG00000002646	sf3b3	100	93.021	ENSCLAG00000003921	SF3B3	100	93.021	Chinchilla_lanigera
ENSGACG00000002646	sf3b3	100	93.021	ENSCSAG00000004371	SF3B3	100	93.021	Chlorocebus_sabaeus
ENSGACG00000002646	sf3b3	90	89.720	ENSCHOG00000001878	SF3B3	90	89.720	Choloepus_hoffmanni
ENSGACG00000002646	sf3b3	100	92.693	ENSCPBG00000015853	SF3B3	100	92.693	Chrysemys_picta_bellii
ENSGACG00000002646	sf3b3	100	79.737	ENSCING00000001342	-	100	79.737	Ciona_intestinalis
ENSGACG00000002646	sf3b3	99	78.261	ENSCSAVG00000011454	-	100	78.261	Ciona_savignyi
ENSGACG00000002646	sf3b3	100	89.491	ENSCANG00000042920	SF3B3	100	89.819	Colobus_angolensis_palliatus
ENSGACG00000002646	sf3b3	100	92.939	ENSCGRG00001015908	Sf3b3	100	92.939	Cricetulus_griseus_chok1gshd
ENSGACG00000002646	sf3b3	100	92.939	ENSCGRG00000010180	Sf3b3	100	92.939	Cricetulus_griseus_crigri
ENSGACG00000002646	sf3b3	82	96.112	ENSCSEG00000014192	sf3b3	99	96.112	Cynoglossus_semilaevis
ENSGACG00000002646	sf3b3	100	97.455	ENSCVAG00000010459	sf3b3	100	97.455	Cyprinodon_variegatus
ENSGACG00000002646	sf3b3	100	96.798	ENSDARG00000103553	sf3b3	100	96.798	Danio_rerio
ENSGACG00000002646	sf3b3	85	92.678	ENSDNOG00000043626	SF3B3	100	92.678	Dasypus_novemcinctus
ENSGACG00000002646	sf3b3	100	93.021	ENSDORG00000014176	Sf3b3	100	93.021	Dipodomys_ordii
ENSGACG00000002646	sf3b3	100	74.655	FBgn0035162	Sf3b3	100	74.655	Drosophila_melanogaster
ENSGACG00000002646	sf3b3	84	95.781	ENSETEG00000002729	SF3B3	84	95.781	Echinops_telfairi
ENSGACG00000002646	sf3b3	100	86.453	ENSEBUG00000006117	sf3b3	100	86.453	Eptatretus_burgeri
ENSGACG00000002646	sf3b3	100	93.103	ENSEASG00005013376	SF3B3	100	93.103	Equus_asinus_asinus
ENSGACG00000002646	sf3b3	100	93.103	ENSECAG00000014053	SF3B3	100	93.103	Equus_caballus
ENSGACG00000002646	sf3b3	93	92.644	ENSEEUG00000015611	SF3B3	93	92.644	Erinaceus_europaeus
ENSGACG00000002646	sf3b3	100	95.332	ENSELUG00000015417	sf3b3	100	95.332	Esox_lucius
ENSGACG00000002646	sf3b3	100	93.103	ENSFCAG00000009487	SF3B3	100	93.103	Felis_catus
ENSGACG00000002646	sf3b3	100	92.775	ENSFALG00000007372	SF3B3	100	92.775	Ficedula_albicollis
ENSGACG00000002646	sf3b3	100	93.021	ENSFDAG00000002608	SF3B3	100	93.021	Fukomys_damarensis
ENSGACG00000002646	sf3b3	100	97.947	ENSFHEG00000017824	sf3b3	100	97.947	Fundulus_heteroclitus
ENSGACG00000002646	sf3b3	100	93.924	ENSGMOG00000008139	sf3b3	100	93.924	Gadus_morhua
ENSGACG00000002646	sf3b3	100	93.021	ENSGALG00000002531	SF3B3	100	93.021	Gallus_gallus
ENSGACG00000002646	sf3b3	100	97.455	ENSGAFG00000015206	sf3b3	100	97.455	Gambusia_affinis
ENSGACG00000002646	sf3b3	96	92.833	ENSGAGG00000006746	SF3B3	97	92.833	Gopherus_agassizii
ENSGACG00000002646	sf3b3	100	93.021	ENSGGOG00000003246	SF3B3	100	93.021	Gorilla_gorilla
ENSGACG00000002646	sf3b3	92	90.812	ENSHBUG00000005960	sf3b3	100	90.812	Haplochromis_burtoni
ENSGACG00000002646	sf3b3	100	93.021	ENSHGLG00000010135	SF3B3	100	93.021	Heterocephalus_glaber_female
ENSGACG00000002646	sf3b3	100	90.924	ENSHGLG00100011148	SF3B3	100	90.924	Heterocephalus_glaber_male
ENSGACG00000002646	sf3b3	100	97.126	ENSHCOG00000011981	sf3b3	100	97.126	Hippocampus_comes
ENSGACG00000002646	sf3b3	100	97.455	ENSIPUG00000020435	sf3b3	100	97.455	Ictalurus_punctatus
ENSGACG00000002646	sf3b3	100	93.021	ENSSTOG00000007065	SF3B3	100	93.021	Ictidomys_tridecemlineatus
ENSGACG00000002646	sf3b3	100	93.021	ENSJJAG00000003948	Sf3b3	100	93.021	Jaculus_jaculus
ENSGACG00000002646	sf3b3	100	95.649	ENSKMAG00000004066	sf3b3	99	97.696	Kryptolebias_marmoratus
ENSGACG00000002646	sf3b3	100	97.783	ENSLBEG00000018302	sf3b3	100	97.783	Labrus_bergylta
ENSGACG00000002646	sf3b3	98	90.199	ENSLACG00000012501	SF3B3	99	90.199	Latimeria_chalumnae
ENSGACG00000002646	sf3b3	100	96.552	ENSLOCG00000007566	sf3b3	100	96.552	Lepisosteus_oculatus
ENSGACG00000002646	sf3b3	100	93.103	ENSLAFG00000012219	SF3B3	100	93.103	Loxodonta_africana
ENSGACG00000002646	sf3b3	100	93.021	ENSMFAG00000045487	SF3B3	100	93.021	Macaca_fascicularis
ENSGACG00000002646	sf3b3	100	93.021	ENSMMUG00000017812	SF3B3	100	93.021	Macaca_mulatta
ENSGACG00000002646	sf3b3	100	93.021	ENSMNEG00000033385	SF3B3	100	93.021	Macaca_nemestrina
ENSGACG00000002646	sf3b3	100	89.491	ENSMLEG00000043891	SF3B3	100	89.491	Mandrillus_leucophaeus
ENSGACG00000002646	sf3b3	100	98.194	ENSMAMG00000016837	sf3b3	100	98.194	Mastacembelus_armatus
ENSGACG00000002646	sf3b3	89	94.732	ENSMZEG00005026015	sf3b3	99	94.732	Maylandia_zebra
ENSGACG00000002646	sf3b3	100	97.783	ENSMZEG00005010836	sf3b3	100	97.783	Maylandia_zebra
ENSGACG00000002646	sf3b3	100	93.021	ENSMGAG00000001597	SF3B3	100	93.021	Meleagris_gallopavo
ENSGACG00000002646	sf3b3	81	76.309	ENSMAUG00000013618	Sf3b3	95	76.683	Mesocricetus_auratus
ENSGACG00000002646	sf3b3	100	92.049	ENSMICG00000001363	SF3B3	100	92.049	Microcebus_murinus
ENSGACG00000002646	sf3b3	100	92.939	ENSMOCG00000006108	Sf3b3	100	92.939	Microtus_ochrogaster
ENSGACG00000002646	sf3b3	89	95.194	ENSMMOG00000002598	sf3b3	97	95.194	Mola_mola
ENSGACG00000002646	sf3b3	100	89.007	ENSMODG00000014363	SF3B3	100	89.007	Monodelphis_domestica
ENSGACG00000002646	sf3b3	100	97.455	ENSMALG00000008014	sf3b3	100	97.455	Monopterus_albus
ENSGACG00000002646	sf3b3	100	92.939	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.939	Mus_caroli
ENSGACG00000002646	sf3b3	100	92.939	ENSMUSG00000033732	Sf3b3	100	92.939	Mus_musculus
ENSGACG00000002646	sf3b3	100	92.857	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.857	Mus_spretus
ENSGACG00000002646	sf3b3	100	93.103	ENSMPUG00000010277	SF3B3	100	93.103	Mustela_putorius_furo
ENSGACG00000002646	sf3b3	100	92.939	ENSMLUG00000014607	SF3B3	100	92.939	Myotis_lucifugus
ENSGACG00000002646	sf3b3	100	93.021	ENSNGAG00000021903	Sf3b3	100	93.021	Nannospalax_galili
ENSGACG00000002646	sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSGACG00000002646	sf3b3	100	91.550	ENSNLEG00000016127	SF3B3	100	91.550	Nomascus_leucogenys
ENSGACG00000002646	sf3b3	92	88.889	ENSMEUG00000004479	SF3B3	94	88.889	Notamacropus_eugenii
ENSGACG00000002646	sf3b3	98	89.866	ENSOPRG00000009847	SF3B3	100	89.866	Ochotona_princeps
ENSGACG00000002646	sf3b3	100	93.021	ENSODEG00000014154	SF3B3	100	93.021	Octodon_degus
ENSGACG00000002646	sf3b3	100	97.947	ENSONIG00000011198	sf3b3	100	97.947	Oreochromis_niloticus
ENSGACG00000002646	sf3b3	100	93.186	ENSOANG00000001161	-	100	93.186	Ornithorhynchus_anatinus
ENSGACG00000002646	sf3b3	100	91.051	ENSOCUG00000004139	SF3B3	100	91.051	Oryctolagus_cuniculus
ENSGACG00000002646	sf3b3	100	97.701	ENSORLG00000013472	sf3b3	100	97.701	Oryzias_latipes
ENSGACG00000002646	sf3b3	100	97.701	ENSORLG00020017473	sf3b3	100	97.701	Oryzias_latipes_hni
ENSGACG00000002646	sf3b3	100	97.537	ENSORLG00015007710	sf3b3	100	97.537	Oryzias_latipes_hsok
ENSGACG00000002646	sf3b3	100	97.537	ENSOMEG00000014483	sf3b3	100	97.537	Oryzias_melastigma
ENSGACG00000002646	sf3b3	100	92.711	ENSOGAG00000016051	SF3B3	100	92.711	Otolemur_garnettii
ENSGACG00000002646	sf3b3	100	92.875	ENSOARG00000004816	SF3B3	100	92.875	Ovis_aries
ENSGACG00000002646	sf3b3	100	93.021	ENSPPAG00000026807	SF3B3	100	93.021	Pan_paniscus
ENSGACG00000002646	sf3b3	100	93.103	ENSPPRG00000001686	SF3B3	100	93.103	Panthera_pardus
ENSGACG00000002646	sf3b3	89	90.165	ENSPTIG00000020382	SF3B3	100	90.165	Panthera_tigris_altaica
ENSGACG00000002646	sf3b3	100	93.021	ENSPTRG00000008308	SF3B3	100	93.021	Pan_troglodytes
ENSGACG00000002646	sf3b3	100	93.021	ENSPANG00000024075	SF3B3	100	93.021	Papio_anubis
ENSGACG00000002646	sf3b3	100	96.716	ENSPKIG00000002712	sf3b3	100	96.716	Paramormyrops_kingsleyae
ENSGACG00000002646	sf3b3	89	92.923	ENSPSIG00000002232	SF3B3	100	92.923	Pelodiscus_sinensis
ENSGACG00000002646	sf3b3	100	92.939	ENSPEMG00000008603	Sf3b3	100	92.939	Peromyscus_maniculatus_bairdii
ENSGACG00000002646	sf3b3	100	90.394	ENSPMAG00000001793	sf3b3	100	90.394	Petromyzon_marinus
ENSGACG00000002646	sf3b3	100	93.186	ENSPCIG00000014927	SF3B3	100	93.186	Phascolarctos_cinereus
ENSGACG00000002646	sf3b3	100	97.537	ENSPFOG00000015516	sf3b3	100	97.537	Poecilia_formosa
ENSGACG00000002646	sf3b3	100	97.537	ENSPLAG00000014330	sf3b3	100	97.537	Poecilia_latipinna
ENSGACG00000002646	sf3b3	100	97.619	ENSPMEG00000019856	sf3b3	100	97.619	Poecilia_mexicana
ENSGACG00000002646	sf3b3	81	97.563	ENSPREG00000019669	sf3b3	97	97.563	Poecilia_reticulata
ENSGACG00000002646	sf3b3	95	93.284	ENSPPYG00000007539	SF3B3	100	93.284	Pongo_abelii
ENSGACG00000002646	sf3b3	100	72.496	ENSPCAG00000002623	SF3B3	100	72.496	Procavia_capensis
ENSGACG00000002646	sf3b3	84	95.370	ENSPCOG00000026582	SF3B3	100	95.370	Propithecus_coquereli
ENSGACG00000002646	sf3b3	100	93.021	ENSPVAG00000000684	SF3B3	100	93.021	Pteropus_vampyrus
ENSGACG00000002646	sf3b3	100	97.701	ENSPNYG00000003528	sf3b3	100	97.701	Pundamilia_nyererei
ENSGACG00000002646	sf3b3	100	96.962	ENSPNAG00000015419	sf3b3	100	96.962	Pygocentrus_nattereri
ENSGACG00000002646	sf3b3	100	92.939	ENSRNOG00000017724	Sf3b3	100	92.939	Rattus_norvegicus
ENSGACG00000002646	sf3b3	100	93.021	ENSRBIG00000021904	SF3B3	100	93.021	Rhinopithecus_bieti
ENSGACG00000002646	sf3b3	100	93.021	ENSRROG00000045703	SF3B3	100	93.021	Rhinopithecus_roxellana
ENSGACG00000002646	sf3b3	100	93.021	ENSSBOG00000029156	SF3B3	100	93.021	Saimiri_boliviensis_boliviensis
ENSGACG00000002646	sf3b3	100	93.186	ENSSHAG00000000372	SF3B3	100	93.186	Sarcophilus_harrisii
ENSGACG00000002646	sf3b3	100	96.880	ENSSFOG00015012877	sf3b3	100	96.880	Scleropages_formosus
ENSGACG00000002646	sf3b3	100	97.455	ENSSMAG00000014386	sf3b3	100	97.455	Scophthalmus_maximus
ENSGACG00000002646	sf3b3	100	98.276	ENSSDUG00000021201	sf3b3	100	98.276	Seriola_dumerili
ENSGACG00000002646	sf3b3	100	98.194	ENSSLDG00000017532	sf3b3	100	98.194	Seriola_lalandi_dorsalis
ENSGACG00000002646	sf3b3	93	92.929	ENSSARG00000006917	SF3B3	93	92.929	Sorex_araneus
ENSGACG00000002646	sf3b3	100	92.857	ENSSPUG00000006253	SF3B3	100	92.857	Sphenodon_punctatus
ENSGACG00000002646	sf3b3	100	90.066	ENSSPAG00000003125	sf3b3	100	90.066	Stegastes_partitus
ENSGACG00000002646	sf3b3	100	93.103	ENSSSCG00000025323	SF3B3	100	93.103	Sus_scrofa
ENSGACG00000002646	sf3b3	100	92.945	ENSTGUG00000006082	SF3B3	100	92.945	Taeniopygia_guttata
ENSGACG00000002646	sf3b3	89	97.337	ENSTNIG00000004857	sf3b3	100	97.337	Tetraodon_nigroviridis
ENSGACG00000002646	sf3b3	93	78.892	ENSTBEG00000002946	SF3B3	100	78.892	Tupaia_belangeri
ENSGACG00000002646	sf3b3	100	92.282	ENSTTRG00000005855	SF3B3	100	92.282	Tursiops_truncatus
ENSGACG00000002646	sf3b3	100	93.103	ENSUAMG00000006780	SF3B3	100	93.103	Ursus_americanus
ENSGACG00000002646	sf3b3	100	93.103	ENSUMAG00000017757	SF3B3	100	93.103	Ursus_maritimus
ENSGACG00000002646	sf3b3	100	78.243	ENSVPAG00000003202	SF3B3	100	78.243	Vicugna_pacos
ENSGACG00000002646	sf3b3	100	93.103	ENSVVUG00000017922	SF3B3	100	93.103	Vulpes_vulpes
ENSGACG00000002646	sf3b3	100	93.432	ENSXETG00000032869	SF3B3	100	93.432	Xenopus_tropicalis
ENSGACG00000002646	sf3b3	77	97.667	ENSXCOG00000013628	sf3b3	97	97.667	Xiphophorus_couchianus
ENSGACG00000002646	sf3b3	100	97.373	ENSXMAG00000006334	sf3b3	100	97.373	Xiphophorus_maculatus