EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002664 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: wu:fc68f03|zgc:65870|zgc:77347
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 25697 bases
Position: chrgroupXII:468306-494002
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003489	KH_1	PF00013.29	3.3e-51	1	3
ENSGACP00000003489	KH_1	PF00013.29	3.3e-51	2	3
ENSGACP00000003489	KH_1	PF00013.29	3.3e-51	3	3
ENSGACP00000003487	KH_1	PF00013.29	4.1e-51	1	3
ENSGACP00000003487	KH_1	PF00013.29	4.1e-51	2	3
ENSGACP00000003487	KH_1	PF00013.29	4.1e-51	3	3
ENSGACP00000003489	KH_2	PF07650.17	4.5e-15	1	1
ENSGACP00000003487	KH_2	PF07650.17	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003501	-	1281	-	ENSGACP00000003489	426 (aa)	-	G3NDT9
ENSGACT00000003499	-	1510	-	ENSGACP00000003487	445 (aa)	-	G3NDT7

Gene Model

Click here to download ENSGACG00000002664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002664	-	75	61.377	ENSGACG00000003044	zgc:110045	96	64.630
ENSGACG00000002664	-	54	54.098	ENSGACG00000007581	hnrnpk	99	32.530
ENSGACG00000002664	-	59	34.722	ENSGACG00000016704	fubp3	61	34.722
ENSGACG00000002664	-	70	64.688	ENSGACG00000002266	-	94	64.688
ENSGACG00000002664	-	71	33.083	ENSGACG00000005991	igf2bp2b	61	32.143
ENSGACG00000002664	-	54	36.986	ENSGACG00000018990	khsrp	50	38.806
ENSGACG00000002664	-	71	33.784	ENSGACG00000012422	KHSRP	52	33.333
ENSGACG00000002664	-	77	41.538	ENSGACG00000020175	nova1	52	41.538
ENSGACG00000002664	-	73	57.670	ENSGACG00000014955	-	95	57.670
ENSGACG00000002664	-	74	63.077	ENSGACG00000006681	PCBP2	97	63.722
ENSGACG00000002664	-	73	64.537	ENSGACG00000003197	pcbp2	96	65.246
ENSGACG00000002664	-	50	39.437	ENSGACG00000016563	fubp1	50	39.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002664	-	97	60.192	ENSG00000090097	PCBP4	98	74.390	Homo_sapiens
ENSGACG00000002664	-	59	86.755	ENSAPOG00000018462	-	67	86.842	Acanthochromis_polyacanthus
ENSGACG00000002664	-	100	92.188	ENSAPOG00000009897	-	98	91.518	Acanthochromis_polyacanthus
ENSGACG00000002664	-	97	60.192	ENSAMEG00000009211	PCBP4	98	60.671	Ailuropoda_melanoleuca
ENSGACG00000002664	-	97	91.325	ENSACIG00000020434	-	100	90.602	Amphilophus_citrinellus
ENSGACG00000002664	-	97	71.631	ENSACIG00000015264	pcbp4	89	72.813	Amphilophus_citrinellus
ENSGACG00000002664	-	95	66.216	ENSAOCG00000006924	-	100	66.216	Amphiprion_ocellaris
ENSGACG00000002664	-	100	88.170	ENSAOCG00000021366	-	100	87.500	Amphiprion_ocellaris
ENSGACG00000002664	-	88	69.121	ENSAPEG00000009555	-	78	82.692	Amphiprion_percula
ENSGACG00000002664	-	97	73.508	ENSAPEG00000023157	pcbp4	100	73.508	Amphiprion_percula
ENSGACG00000002664	-	100	86.504	ENSATEG00000006511	-	100	85.841	Anabas_testudineus
ENSGACG00000002664	-	91	66.351	ENSATEG00000008529	pcbp4	93	67.308	Anabas_testudineus
ENSGACG00000002664	-	98	64.371	ENSACAG00000011701	PCBP4	99	63.895	Anolis_carolinensis
ENSGACG00000002664	-	97	60.192	ENSANAG00000023072	PCBP4	98	60.621	Aotus_nancymaae
ENSGACG00000002664	-	100	91.295	ENSACLG00000025246	-	98	90.625	Astatotilapia_calliptera
ENSGACG00000002664	-	100	71.222	ENSACLG00000013348	pcbp4	96	70.600	Astatotilapia_calliptera
ENSGACG00000002664	-	100	80.044	ENSAMXG00000033125	pcbp4	98	79.386	Astyanax_mexicanus
ENSGACG00000002664	-	97	60.432	ENSBTAG00000018622	PCBP4	98	60.911	Bos_taurus
ENSGACG00000002664	-	97	60.432	ENSCJAG00000005783	PCBP4	98	60.859	Callithrix_jacchus
ENSGACG00000002664	-	97	60.192	ENSCAFG00000010019	PCBP4	98	60.671	Canis_familiaris
ENSGACG00000002664	-	97	60.192	ENSCAFG00020022361	PCBP4	98	60.671	Canis_lupus_dingo
ENSGACG00000002664	-	97	60.432	ENSCHIG00000012918	PCBP4	98	60.911	Capra_hircus
ENSGACG00000002664	-	97	60.432	ENSTSYG00000008765	PCBP4	98	60.859	Carlito_syrichta
ENSGACG00000002664	-	100	59.207	ENSCAPG00000005895	PCBP4	100	59.629	Cavia_aperea
ENSGACG00000002664	-	100	59.207	ENSCPOG00000014617	PCBP4	100	59.629	Cavia_porcellus
ENSGACG00000002664	-	97	60.432	ENSCCAG00000033268	PCBP4	98	60.859	Cebus_capucinus
ENSGACG00000002664	-	97	60.432	ENSCATG00000032034	PCBP4	98	60.859	Cercocebus_atys
ENSGACG00000002664	-	100	59.207	ENSCLAG00000008356	PCBP4	100	59.629	Chinchilla_lanigera
ENSGACG00000002664	-	97	60.432	ENSCSAG00000013913	PCBP4	98	60.859	Chlorocebus_sabaeus
ENSGACG00000002664	-	98	63.915	ENSCPBG00000016554	PCBP4	96	63.420	Chrysemys_picta_bellii
ENSGACG00000002664	-	97	60.432	ENSCANG00000038865	PCBP4	98	60.859	Colobus_angolensis_palliatus
ENSGACG00000002664	-	100	59.674	ENSCGRG00001014953	Pcbp4	100	60.140	Cricetulus_griseus_chok1gshd
ENSGACG00000002664	-	100	59.674	ENSCGRG00000008617	Pcbp4	100	60.140	Cricetulus_griseus_crigri
ENSGACG00000002664	-	100	67.364	ENSCSEG00000014487	pcbp4	95	69.456	Cynoglossus_semilaevis
ENSGACG00000002664	-	100	80.222	ENSCSEG00000021041	PCBP4	100	79.556	Cynoglossus_semilaevis
ENSGACG00000002664	-	95	66.578	ENSCVAG00000003674	pcbp4	98	66.578	Cyprinodon_variegatus
ENSGACG00000002664	-	100	89.955	ENSCVAG00000013090	-	98	89.286	Cyprinodon_variegatus
ENSGACG00000002664	-	100	79.560	ENSDARG00000024276	pcbp4	99	82.781	Danio_rerio
ENSGACG00000002664	-	94	79.167	ENSDNOG00000033951	PCBP4	87	79.167	Dasypus_novemcinctus
ENSGACG00000002664	-	97	59.233	ENSDORG00000000573	Pcbp4	98	60.192	Dipodomys_ordii
ENSGACG00000002664	-	62	59.516	ENSETEG00000001778	PCBP4	96	59.516	Echinops_telfairi
ENSGACG00000002664	-	97	59.712	ENSEASG00005012889	PCBP4	98	60.192	Equus_asinus_asinus
ENSGACG00000002664	-	97	59.712	ENSECAG00000024218	PCBP4	98	60.192	Equus_caballus
ENSGACG00000002664	-	100	75.000	ENSELUG00000018204	pcbp4	98	75.000	Esox_lucius
ENSGACG00000002664	-	100	84.106	ENSELUG00000001870	-	98	83.628	Esox_lucius
ENSGACG00000002664	-	97	60.432	ENSFCAG00000009148	PCBP4	98	60.911	Felis_catus
ENSGACG00000002664	-	96	60.584	ENSFALG00000008831	PCBP4	96	60.287	Ficedula_albicollis
ENSGACG00000002664	-	100	59.207	ENSFDAG00000012692	PCBP4	100	59.629	Fukomys_damarensis
ENSGACG00000002664	-	95	69.554	ENSFHEG00000002769	-	97	68.766	Fundulus_heteroclitus
ENSGACG00000002664	-	100	85.778	ENSGMOG00000017799	-	100	85.333	Gadus_morhua
ENSGACG00000002664	-	98	59.524	ENSGALG00000027695	PCBP4	98	60.476	Gallus_gallus
ENSGACG00000002664	-	50	86.842	ENSGAFG00000018301	pcbp4	64	87.500	Gambusia_affinis
ENSGACG00000002664	-	83	90.515	ENSGAFG00000021090	-	78	89.702	Gambusia_affinis
ENSGACG00000002664	-	98	64.371	ENSGAGG00000022116	PCBP4	96	63.895	Gopherus_agassizii
ENSGACG00000002664	-	97	60.192	ENSGGOG00000012474	PCBP4	98	60.621	Gorilla_gorilla
ENSGACG00000002664	-	100	71.014	ENSHBUG00000009472	pcbp4	96	70.600	Haplochromis_burtoni
ENSGACG00000002664	-	100	91.518	ENSHBUG00000005329	-	98	90.848	Haplochromis_burtoni
ENSGACG00000002664	-	100	59.674	ENSHGLG00000012018	PCBP4	100	60.093	Heterocephalus_glaber_female
ENSGACG00000002664	-	100	57.870	ENSHGLG00100008748	PCBP4	100	58.295	Heterocephalus_glaber_male
ENSGACG00000002664	-	100	84.598	ENSHCOG00000010838	-	100	83.252	Hippocampus_comes
ENSGACG00000002664	-	100	80.667	ENSIPUG00000008212	pcbp4	98	80.667	Ictalurus_punctatus
ENSGACG00000002664	-	100	57.576	ENSSTOG00000002573	PCBP4	93	65.714	Ictidomys_tridecemlineatus
ENSGACG00000002664	-	100	59.674	ENSJJAG00000016235	Pcbp4	100	60.140	Jaculus_jaculus
ENSGACG00000002664	-	100	91.071	ENSKMAG00000017554	-	98	90.402	Kryptolebias_marmoratus
ENSGACG00000002664	-	100	73.191	ENSKMAG00000014252	pcbp4	96	72.979	Kryptolebias_marmoratus
ENSGACG00000002664	-	100	93.304	ENSLBEG00000011345	-	98	92.634	Labrus_bergylta
ENSGACG00000002664	-	98	69.286	ENSLACG00000015899	PCBP4	96	80.882	Latimeria_chalumnae
ENSGACG00000002664	-	100	79.018	ENSLOCG00000013402	pcbp4	98	78.795	Lepisosteus_oculatus
ENSGACG00000002664	-	95	58.005	ENSLAFG00000010732	PCBP4	100	58.486	Loxodonta_africana
ENSGACG00000002664	-	97	60.432	ENSMFAG00000001431	PCBP4	98	60.859	Macaca_fascicularis
ENSGACG00000002664	-	97	60.432	ENSMMUG00000022205	PCBP4	93	67.550	Macaca_mulatta
ENSGACG00000002664	-	97	60.432	ENSMNEG00000028553	PCBP4	98	60.859	Macaca_nemestrina
ENSGACG00000002664	-	97	60.432	ENSMLEG00000027083	PCBP4	98	60.859	Mandrillus_leucophaeus
ENSGACG00000002664	-	100	91.741	ENSMAMG00000011364	-	98	91.071	Mastacembelus_armatus
ENSGACG00000002664	-	100	71.967	ENSMAMG00000010163	pcbp4	95	71.967	Mastacembelus_armatus
ENSGACG00000002664	-	100	91.295	ENSMZEG00005023631	-	98	90.625	Maylandia_zebra
ENSGACG00000002664	-	100	71.222	ENSMZEG00005008852	pcbp4	99	68.282	Maylandia_zebra
ENSGACG00000002664	-	63	68.868	ENSMGAG00000005091	-	96	68.868	Meleagris_gallopavo
ENSGACG00000002664	-	63	53.403	ENSMGAG00000003895	-	88	53.403	Meleagris_gallopavo
ENSGACG00000002664	-	100	59.674	ENSMAUG00000021064	Pcbp4	100	60.140	Mesocricetus_auratus
ENSGACG00000002664	-	97	60.432	ENSMICG00000002686	PCBP4	98	60.859	Microcebus_murinus
ENSGACG00000002664	-	100	59.674	ENSMOCG00000013557	Pcbp4	100	60.140	Microtus_ochrogaster
ENSGACG00000002664	-	69	65.000	ENSMMOG00000017756	pcbp4	97	65.436	Mola_mola
ENSGACG00000002664	-	100	85.491	ENSMMOG00000020533	-	100	85.045	Mola_mola
ENSGACG00000002664	-	97	59.952	ENSMODG00000011790	PCBP4	83	60.192	Monodelphis_domestica
ENSGACG00000002664	-	91	75.845	ENSMALG00000020318	pcbp4	87	75.362	Monopterus_albus
ENSGACG00000002664	-	88	91.414	ENSMALG00000022117	-	100	90.349	Monopterus_albus
ENSGACG00000002664	-	100	59.907	MGP_CAROLIEiJ_G0032623	Pcbp4	100	73.770	Mus_caroli
ENSGACG00000002664	-	100	59.907	ENSMUSG00000023495	Pcbp4	99	76.159	Mus_musculus
ENSGACG00000002664	-	100	59.674	MGP_PahariEiJ_G0015491	Pcbp4	100	72.951	Mus_pahari
ENSGACG00000002664	-	100	59.907	MGP_SPRETEiJ_G0033768	-	100	73.770	Mus_spretus
ENSGACG00000002664	-	97	60.432	ENSMPUG00000011766	PCBP4	98	60.911	Mustela_putorius_furo
ENSGACG00000002664	-	97	60.432	ENSNGAG00000013148	Pcbp4	98	60.911	Nannospalax_galili
ENSGACG00000002664	-	100	87.054	ENSNBRG00000015885	-	100	86.384	Neolamprologus_brichardi
ENSGACG00000002664	-	97	60.134	ENSNBRG00000007475	pcbp4	98	60.356	Neolamprologus_brichardi
ENSGACG00000002664	-	97	60.432	ENSNLEG00000007064	PCBP4	98	60.859	Nomascus_leucogenys
ENSGACG00000002664	-	89	50.236	ENSMEUG00000006917	PCBP4	95	50.000	Notamacropus_eugenii
ENSGACG00000002664	-	89	52.370	ENSOPRG00000008763	PCBP4	98	52.844	Ochotona_princeps
ENSGACG00000002664	-	100	59.441	ENSODEG00000018230	PCBP4	100	59.861	Octodon_degus
ENSGACG00000002664	-	98	59.048	ENSOANG00000014110	PCBP4	96	58.810	Ornithorhynchus_anatinus
ENSGACG00000002664	-	97	60.192	ENSOCUG00000025336	PCBP4	98	60.671	Oryctolagus_cuniculus
ENSGACG00000002664	-	100	86.607	ENSORLG00000009899	-	100	85.938	Oryzias_latipes
ENSGACG00000002664	-	100	70.378	ENSORLG00000003061	pcbp4	96	69.958	Oryzias_latipes
ENSGACG00000002664	-	100	90.402	ENSORLG00020001183	-	98	89.732	Oryzias_latipes_hni
ENSGACG00000002664	-	100	90.848	ENSORLG00015017819	-	98	90.179	Oryzias_latipes_hsok
ENSGACG00000002664	-	100	69.792	ENSORLG00015019262	pcbp4	96	69.375	Oryzias_latipes_hsok
ENSGACG00000002664	-	100	91.071	ENSOMEG00000011545	-	98	90.402	Oryzias_melastigma
ENSGACG00000002664	-	100	68.432	ENSOMEG00000003516	-	96	67.797	Oryzias_melastigma
ENSGACG00000002664	-	97	60.192	ENSOGAG00000032384	PCBP4	98	60.621	Otolemur_garnettii
ENSGACG00000002664	-	95	59.126	ENSOARG00000006603	PCBP4	100	59.640	Ovis_aries
ENSGACG00000002664	-	97	60.192	ENSPPAG00000038764	PCBP4	98	60.621	Pan_paniscus
ENSGACG00000002664	-	97	60.432	ENSPPRG00000006165	PCBP4	98	60.911	Panthera_pardus
ENSGACG00000002664	-	97	60.432	ENSPTIG00000005401	PCBP4	94	60.911	Panthera_tigris_altaica
ENSGACG00000002664	-	97	60.192	ENSPTRG00000014983	PCBP4	98	60.621	Pan_troglodytes
ENSGACG00000002664	-	97	60.432	ENSPANG00000026222	PCBP4	98	60.859	Papio_anubis
ENSGACG00000002664	-	100	74.720	ENSPKIG00000005487	-	98	74.273	Paramormyrops_kingsleyae
ENSGACG00000002664	-	100	80.313	ENSPKIG00000010244	pcbp4	98	79.642	Paramormyrops_kingsleyae
ENSGACG00000002664	-	82	60.112	ENSPSIG00000011286	PCBP4	99	59.551	Pelodiscus_sinensis
ENSGACG00000002664	-	100	80.984	ENSPMGG00000022732	-	100	80.313	Periophthalmus_magnuspinnatus
ENSGACG00000002664	-	97	72.275	ENSPMGG00000000063	pcbp4	99	71.090	Periophthalmus_magnuspinnatus
ENSGACG00000002664	-	100	59.674	ENSPEMG00000009276	Pcbp4	100	60.140	Peromyscus_maniculatus_bairdii
ENSGACG00000002664	-	97	60.911	ENSPCIG00000018151	PCBP4	94	60.671	Phascolarctos_cinereus
ENSGACG00000002664	-	98	68.293	ENSPFOG00000014474	pcbp4	97	78.346	Poecilia_formosa
ENSGACG00000002664	-	100	90.402	ENSPFOG00000002989	-	98	89.732	Poecilia_formosa
ENSGACG00000002664	-	89	69.789	ENSPLAG00000011438	-	98	69.087	Poecilia_latipinna
ENSGACG00000002664	-	96	67.013	ENSPLAG00000023316	pcbp4	89	68.571	Poecilia_latipinna
ENSGACG00000002664	-	62	59.322	ENSPMEG00000012990	pcbp4	100	61.356	Poecilia_mexicana
ENSGACG00000002664	-	100	81.250	ENSPREG00000017370	-	100	80.580	Poecilia_reticulata
ENSGACG00000002664	-	69	60.000	ENSPREG00000021498	-	81	60.000	Poecilia_reticulata
ENSGACG00000002664	-	97	60.432	ENSPPYG00000013822	PCBP4	98	60.859	Pongo_abelii
ENSGACG00000002664	-	89	54.106	ENSPCAG00000009515	PCBP4	97	54.106	Procavia_capensis
ENSGACG00000002664	-	97	60.432	ENSPCOG00000027535	PCBP4	98	60.911	Propithecus_coquereli
ENSGACG00000002664	-	89	50.575	ENSPVAG00000012474	PCBP4	98	51.030	Pteropus_vampyrus
ENSGACG00000002664	-	100	87.277	ENSPNYG00000003098	-	100	86.607	Pundamilia_nyererei
ENSGACG00000002664	-	97	69.663	ENSPNYG00000019234	pcbp4	100	69.888	Pundamilia_nyererei
ENSGACG00000002664	-	100	80.879	ENSPNAG00000025434	pcbp4	98	80.220	Pygocentrus_nattereri
ENSGACG00000002664	-	100	59.674	ENSRNOG00000012406	Pcbp4	100	60.140	Rattus_norvegicus
ENSGACG00000002664	-	97	60.432	ENSRBIG00000043793	PCBP4	98	60.859	Rhinopithecus_bieti
ENSGACG00000002664	-	97	60.432	ENSRROG00000034589	PCBP4	98	60.859	Rhinopithecus_roxellana
ENSGACG00000002664	-	97	60.432	ENSSBOG00000027029	PCBP4	98	60.859	Saimiri_boliviensis_boliviensis
ENSGACG00000002664	-	69	64.286	ENSSHAG00000007362	PCBP4	100	64.286	Sarcophilus_harrisii
ENSGACG00000002664	-	100	75.391	ENSSFOG00015012075	PCBP4	98	75.391	Scleropages_formosus
ENSGACG00000002664	-	72	78.641	ENSSFOG00015008221	pcbp4	60	77.670	Scleropages_formosus
ENSGACG00000002664	-	100	71.789	ENSSMAG00000005827	pcbp4	94	72.632	Scophthalmus_maximus
ENSGACG00000002664	-	100	89.310	ENSSMAG00000009392	-	97	88.641	Scophthalmus_maximus
ENSGACG00000002664	-	97	73.558	ENSSDUG00000017719	pcbp4	97	73.077	Seriola_dumerili
ENSGACG00000002664	-	100	88.393	ENSSDUG00000015540	-	100	87.723	Seriola_dumerili
ENSGACG00000002664	-	100	88.393	ENSSLDG00000007851	-	100	87.723	Seriola_lalandi_dorsalis
ENSGACG00000002664	-	60	77.907	ENSSLDG00000024847	-	77	83.544	Seriola_lalandi_dorsalis
ENSGACG00000002664	-	98	59.189	ENSSPUG00000000194	PCBP4	99	58.711	Sphenodon_punctatus
ENSGACG00000002664	-	100	92.188	ENSSPAG00000003033	-	98	91.518	Stegastes_partitus
ENSGACG00000002664	-	95	62.735	ENSSPAG00000019058	-	92	62.198	Stegastes_partitus
ENSGACG00000002664	-	97	60.432	ENSSSCG00000028446	PCBP4	98	60.911	Sus_scrofa
ENSGACG00000002664	-	72	58.104	ENSTGUG00000006393	PCBP4	98	58.228	Taeniopygia_guttata
ENSGACG00000002664	-	100	85.045	ENSTRUG00000007426	-	100	84.375	Takifugu_rubripes
ENSGACG00000002664	-	97	88.862	ENSTNIG00000017887	-	98	88.136	Tetraodon_nigroviridis
ENSGACG00000002664	-	79	40.838	ENSTBEG00000015770	PCBP4	100	40.576	Tupaia_belangeri
ENSGACG00000002664	-	74	52.660	ENSTTRG00000001443	PCBP4	83	53.723	Tursiops_truncatus
ENSGACG00000002664	-	95	56.734	ENSUAMG00000020871	PCBP4	100	57.307	Ursus_americanus
ENSGACG00000002664	-	87	62.105	ENSUMAG00000021609	PCBP4	89	62.069	Ursus_maritimus
ENSGACG00000002664	-	97	60.192	ENSVVUG00000026857	PCBP4	98	60.671	Vulpes_vulpes
ENSGACG00000002664	-	59	69.697	ENSXCOG00000017325	pcbp4	63	87.333	Xiphophorus_couchianus
ENSGACG00000002664	-	97	80.161	ENSXCOG00000000111	-	100	79.357	Xiphophorus_couchianus
ENSGACG00000002664	-	87	64.706	ENSXMAG00000022188	-	90	66.259	Xiphophorus_maculatus
ENSGACG00000002664	-	100	89.955	ENSXMAG00000024530	-	98	89.286	Xiphophorus_maculatus
ENSGACG00000002664	-	80	79.006	ENSXMAG00000015709	pcbp4	77	77.419	Xiphophorus_maculatus