EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002821 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2890 bases
Position: chrgroupXVI:6947968-6950857
Accession: ZDB-GENE-040426-1090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003697	RNase_H2-Ydr279	PF09468.10	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003709	-	970	-	ENSGACP00000003697	312 (aa)	-	G3NEE6

Gene Model

Click here to download ENSGACG00000002821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002821's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002821	rnaseh2b	88	51.095	ENSG00000136104	RNASEH2B	94	55.932	Homo_sapiens
ENSGACG00000002821	rnaseh2b	100	83.013	ENSAPOG00000010496	rnaseh2b	100	83.013	Acanthochromis_polyacanthus
ENSGACG00000002821	rnaseh2b	90	49.650	ENSAMEG00000012040	RNASEH2B	95	49.650	Ailuropoda_melanoleuca
ENSGACG00000002821	rnaseh2b	100	69.231	ENSACIG00000021991	rnaseh2b	97	75.000	Amphilophus_citrinellus
ENSGACG00000002821	rnaseh2b	100	81.731	ENSAOCG00000013398	rnaseh2b	100	81.731	Amphiprion_ocellaris
ENSGACG00000002821	rnaseh2b	100	81.410	ENSAPEG00000006033	rnaseh2b	100	81.410	Amphiprion_percula
ENSGACG00000002821	rnaseh2b	100	80.769	ENSATEG00000008370	rnaseh2b	100	80.769	Anabas_testudineus
ENSGACG00000002821	rnaseh2b	84	62.214	ENSAPLG00000008955	RNASEH2B	99	62.455	Anas_platyrhynchos
ENSGACG00000002821	rnaseh2b	94	53.559	ENSACAG00000011679	RNASEH2B	97	53.559	Anolis_carolinensis
ENSGACG00000002821	rnaseh2b	92	49.826	ENSANAG00000020662	RNASEH2B	90	49.826	Aotus_nancymaae
ENSGACG00000002821	rnaseh2b	100	77.244	ENSACLG00000000467	rnaseh2b	100	77.244	Astatotilapia_calliptera
ENSGACG00000002821	rnaseh2b	99	66.667	ENSAMXG00000014351	rnaseh2b	99	66.667	Astyanax_mexicanus
ENSGACG00000002821	rnaseh2b	90	51.590	ENSBTAG00000020149	RNASEH2B	90	51.590	Bos_taurus
ENSGACG00000002821	rnaseh2b	73	45.614	ENSCJAG00000003822	-	82	45.614	Callithrix_jacchus
ENSGACG00000002821	rnaseh2b	87	50.183	ENSCJAG00000008585	-	88	50.183	Callithrix_jacchus
ENSGACG00000002821	rnaseh2b	90	49.470	ENSCAFG00000004295	RNASEH2B	90	49.470	Canis_familiaris
ENSGACG00000002821	rnaseh2b	90	49.470	ENSCAFG00020000250	RNASEH2B	90	49.470	Canis_lupus_dingo
ENSGACG00000002821	rnaseh2b	76	46.025	ENSCHIG00000012982	-	82	46.025	Capra_hircus
ENSGACG00000002821	rnaseh2b	90	50.355	ENSCHIG00000018220	RNASEH2B	90	50.355	Capra_hircus
ENSGACG00000002821	rnaseh2b	90	48.763	ENSTSYG00000009176	-	90	48.763	Carlito_syrichta
ENSGACG00000002821	rnaseh2b	90	40.569	ENSTSYG00000031177	-	90	40.569	Carlito_syrichta
ENSGACG00000002821	rnaseh2b	90	41.696	ENSCAPG00000009978	RNASEH2B	94	42.657	Cavia_aperea
ENSGACG00000002821	rnaseh2b	90	47.535	ENSCPOG00000032527	RNASEH2B	89	47.535	Cavia_porcellus
ENSGACG00000002821	rnaseh2b	90	49.823	ENSCCAG00000026979	RNASEH2B	91	49.645	Cebus_capucinus
ENSGACG00000002821	rnaseh2b	88	50.000	ENSCATG00000031336	RNASEH2B	76	50.000	Cercocebus_atys
ENSGACG00000002821	rnaseh2b	90	50.883	ENSCLAG00000003517	RNASEH2B	76	50.883	Chinchilla_lanigera
ENSGACG00000002821	rnaseh2b	89	49.466	ENSCSAG00000017701	RNASEH2B	83	49.466	Chlorocebus_sabaeus
ENSGACG00000002821	rnaseh2b	95	40.541	ENSCHOG00000013688	RNASEH2B	95	41.554	Choloepus_hoffmanni
ENSGACG00000002821	rnaseh2b	99	56.230	ENSCPBG00000008684	RNASEH2B	95	56.230	Chrysemys_picta_bellii
ENSGACG00000002821	rnaseh2b	95	32.237	ENSCING00000016454	-	96	32.237	Ciona_intestinalis
ENSGACG00000002821	rnaseh2b	90	49.301	ENSCANG00000041511	-	89	49.301	Colobus_angolensis_palliatus
ENSGACG00000002821	rnaseh2b	90	50.883	ENSCGRG00001000611	Rnaseh2b	90	51.237	Cricetulus_griseus_chok1gshd
ENSGACG00000002821	rnaseh2b	90	50.883	ENSCGRG00000006077	Rnaseh2b	90	51.237	Cricetulus_griseus_crigri
ENSGACG00000002821	rnaseh2b	100	75.962	ENSCSEG00000004910	rnaseh2b	100	75.962	Cynoglossus_semilaevis
ENSGACG00000002821	rnaseh2b	100	75.000	ENSCVAG00000005212	rnaseh2b	100	75.000	Cyprinodon_variegatus
ENSGACG00000002821	rnaseh2b	99	66.346	ENSDARG00000005128	rnaseh2b	99	66.346	Danio_rerio
ENSGACG00000002821	rnaseh2b	88	48.364	ENSDNOG00000049666	-	87	48.364	Dasypus_novemcinctus
ENSGACG00000002821	rnaseh2b	98	43.689	ENSDNOG00000034290	-	98	43.182	Dasypus_novemcinctus
ENSGACG00000002821	rnaseh2b	99	48.065	ENSDORG00000010708	Rnaseh2b	98	48.065	Dipodomys_ordii
ENSGACG00000002821	rnaseh2b	83	38.314	ENSEBUG00000005965	rnaseh2b	97	38.314	Eptatretus_burgeri
ENSGACG00000002821	rnaseh2b	90	50.530	ENSEASG00005017323	RNASEH2B	89	50.530	Equus_asinus_asinus
ENSGACG00000002821	rnaseh2b	90	50.883	ENSECAG00000014262	RNASEH2B	100	44.444	Equus_caballus
ENSGACG00000002821	rnaseh2b	100	70.607	ENSELUG00000019560	rnaseh2b	100	70.607	Esox_lucius
ENSGACG00000002821	rnaseh2b	88	48.913	ENSFCAG00000014257	RNASEH2B	84	48.913	Felis_catus
ENSGACG00000002821	rnaseh2b	93	59.589	ENSFALG00000008435	RNASEH2B	97	59.589	Ficedula_albicollis
ENSGACG00000002821	rnaseh2b	88	49.270	ENSFDAG00000009920	RNASEH2B	93	49.270	Fukomys_damarensis
ENSGACG00000002821	rnaseh2b	100	78.205	ENSFHEG00000012160	rnaseh2b	100	78.205	Fundulus_heteroclitus
ENSGACG00000002821	rnaseh2b	100	67.308	ENSGMOG00000016830	rnaseh2b	100	67.308	Gadus_morhua
ENSGACG00000002821	rnaseh2b	95	57.383	ENSGALG00000017015	RNASEH2B	100	57.827	Gallus_gallus
ENSGACG00000002821	rnaseh2b	100	77.885	ENSGAFG00000021222	rnaseh2b	100	77.885	Gambusia_affinis
ENSGACG00000002821	rnaseh2b	91	59.859	ENSGAGG00000014722	RNASEH2B	99	59.859	Gopherus_agassizii
ENSGACG00000002821	rnaseh2b	88	50.542	ENSGGOG00000001044	RNASEH2B	87	50.542	Gorilla_gorilla
ENSGACG00000002821	rnaseh2b	100	77.885	ENSHBUG00000006049	rnaseh2b	100	77.885	Haplochromis_burtoni
ENSGACG00000002821	rnaseh2b	88	49.635	ENSHGLG00100015953	RNASEH2B	91	49.635	Heterocephalus_glaber_male
ENSGACG00000002821	rnaseh2b	100	72.930	ENSHCOG00000003318	rnaseh2b	100	72.930	Hippocampus_comes
ENSGACG00000002821	rnaseh2b	100	69.010	ENSIPUG00000023815	rnaseh2b	100	69.010	Ictalurus_punctatus
ENSGACG00000002821	rnaseh2b	90	50.178	ENSSTOG00000015126	RNASEH2B	94	50.178	Ictidomys_tridecemlineatus
ENSGACG00000002821	rnaseh2b	87	51.838	ENSJJAG00000013335	Rnaseh2b	90	51.838	Jaculus_jaculus
ENSGACG00000002821	rnaseh2b	100	78.846	ENSKMAG00000002198	rnaseh2b	100	78.846	Kryptolebias_marmoratus
ENSGACG00000002821	rnaseh2b	100	79.487	ENSLBEG00000019331	rnaseh2b	100	79.487	Labrus_bergylta
ENSGACG00000002821	rnaseh2b	69	59.633	ENSLACG00000010782	RNASEH2B	92	59.829	Latimeria_chalumnae
ENSGACG00000002821	rnaseh2b	100	66.454	ENSLOCG00000009296	rnaseh2b	100	66.454	Lepisosteus_oculatus
ENSGACG00000002821	rnaseh2b	90	48.057	ENSLAFG00000030158	RNASEH2B	90	48.057	Loxodonta_africana
ENSGACG00000002821	rnaseh2b	90	49.823	ENSMFAG00000038464	-	89	49.823	Macaca_fascicularis
ENSGACG00000002821	rnaseh2b	90	46.643	ENSMMUG00000021746	RNASEH2B	88	46.643	Macaca_mulatta
ENSGACG00000002821	rnaseh2b	90	49.823	ENSMNEG00000030580	RNASEH2B	89	49.823	Macaca_nemestrina
ENSGACG00000002821	rnaseh2b	90	49.301	ENSMLEG00000043911	-	89	49.301	Mandrillus_leucophaeus
ENSGACG00000002821	rnaseh2b	100	80.769	ENSMAMG00000017109	rnaseh2b	100	80.769	Mastacembelus_armatus
ENSGACG00000002821	rnaseh2b	100	72.436	ENSMZEG00005021926	rnaseh2b	100	73.397	Maylandia_zebra
ENSGACG00000002821	rnaseh2b	85	59.701	ENSMGAG00000015025	RNASEH2B	97	60.071	Meleagris_gallopavo
ENSGACG00000002821	rnaseh2b	90	50.177	ENSMAUG00000016520	Rnaseh2b	90	50.530	Mesocricetus_auratus
ENSGACG00000002821	rnaseh2b	88	50.000	ENSMICG00000000528	RNASEH2B	87	50.000	Microcebus_murinus
ENSGACG00000002821	rnaseh2b	99	77.170	ENSMMOG00000019799	rnaseh2b	100	81.849	Mola_mola
ENSGACG00000002821	rnaseh2b	98	53.896	ENSMODG00000010775	RNASEH2B	99	53.896	Monodelphis_domestica
ENSGACG00000002821	rnaseh2b	99	80.386	ENSMALG00000004463	rnaseh2b	100	80.386	Monopterus_albus
ENSGACG00000002821	rnaseh2b	73	53.070	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	53.509	Mus_caroli
ENSGACG00000002821	rnaseh2b	88	52.190	ENSMUSG00000021932	Rnaseh2b	89	51.418	Mus_musculus
ENSGACG00000002821	rnaseh2b	92	39.755	MGP_PahariEiJ_G0030407	-	93	39.755	Mus_pahari
ENSGACG00000002821	rnaseh2b	72	47.321	ENSMPUG00000018010	RNASEH2B	91	47.321	Mustela_putorius_furo
ENSGACG00000002821	rnaseh2b	90	52.113	ENSMLUG00000004065	-	89	52.113	Myotis_lucifugus
ENSGACG00000002821	rnaseh2b	100	76.923	ENSNBRG00000003253	rnaseh2b	100	76.923	Neolamprologus_brichardi
ENSGACG00000002821	rnaseh2b	88	50.542	ENSNLEG00000003804	RNASEH2B	87	50.542	Nomascus_leucogenys
ENSGACG00000002821	rnaseh2b	91	55.556	ENSMEUG00000003665	RNASEH2B	97	55.556	Notamacropus_eugenii
ENSGACG00000002821	rnaseh2b	52	45.062	ENSOPRG00000003695	-	51	47.561	Ochotona_princeps
ENSGACG00000002821	rnaseh2b	88	51.095	ENSODEG00000006793	-	87	51.095	Octodon_degus
ENSGACG00000002821	rnaseh2b	69	46.759	ENSODEG00000005412	-	86	46.759	Octodon_degus
ENSGACG00000002821	rnaseh2b	100	77.885	ENSONIG00000006657	rnaseh2b	100	77.885	Oreochromis_niloticus
ENSGACG00000002821	rnaseh2b	91	56.897	ENSOANG00000015537	RNASEH2B	98	56.897	Ornithorhynchus_anatinus
ENSGACG00000002821	rnaseh2b	88	48.375	ENSOCUG00000008904	RNASEH2B	85	49.458	Oryctolagus_cuniculus
ENSGACG00000002821	rnaseh2b	99	73.701	ENSORLG00000011850	rnaseh2b	100	73.701	Oryzias_latipes
ENSGACG00000002821	rnaseh2b	99	73.377	ENSORLG00020012081	rnaseh2b	100	73.377	Oryzias_latipes_hni
ENSGACG00000002821	rnaseh2b	99	72.727	ENSORLG00015015468	rnaseh2b	100	72.727	Oryzias_latipes_hsok
ENSGACG00000002821	rnaseh2b	99	75.000	ENSOMEG00000012441	rnaseh2b	100	75.000	Oryzias_melastigma
ENSGACG00000002821	rnaseh2b	88	50.903	ENSOGAG00000016486	RNASEH2B	91	50.903	Otolemur_garnettii
ENSGACG00000002821	rnaseh2b	92	50.173	ENSOARG00000008701	RNASEH2B	95	50.173	Ovis_aries
ENSGACG00000002821	rnaseh2b	88	50.903	ENSPPAG00000026374	RNASEH2B	93	48.624	Pan_paniscus
ENSGACG00000002821	rnaseh2b	90	48.432	ENSPPRG00000012450	RNASEH2B	92	48.432	Panthera_pardus
ENSGACG00000002821	rnaseh2b	88	49.640	ENSPTIG00000013918	RNASEH2B	97	49.640	Panthera_tigris_altaica
ENSGACG00000002821	rnaseh2b	88	50.542	ENSPTRG00000005886	RNASEH2B	95	52.549	Pan_troglodytes
ENSGACG00000002821	rnaseh2b	90	49.301	ENSPANG00000022424	-	89	49.301	Papio_anubis
ENSGACG00000002821	rnaseh2b	100	70.288	ENSPKIG00000013386	rnaseh2b	100	70.288	Paramormyrops_kingsleyae
ENSGACG00000002821	rnaseh2b	65	52.404	ENSPSIG00000002224	RNASEH2B	94	52.404	Pelodiscus_sinensis
ENSGACG00000002821	rnaseh2b	63	74.359	ENSPMGG00000010299	rnaseh2b	95	74.359	Periophthalmus_magnuspinnatus
ENSGACG00000002821	rnaseh2b	88	51.825	ENSPEMG00000019721	Rnaseh2b	87	52.174	Peromyscus_maniculatus_bairdii
ENSGACG00000002821	rnaseh2b	88	53.791	ENSPCIG00000014535	-	92	53.791	Phascolarctos_cinereus
ENSGACG00000002821	rnaseh2b	100	77.389	ENSPFOG00000016722	rnaseh2b	100	77.389	Poecilia_formosa
ENSGACG00000002821	rnaseh2b	100	77.564	ENSPLAG00000011755	rnaseh2b	100	77.564	Poecilia_latipinna
ENSGACG00000002821	rnaseh2b	100	77.885	ENSPMEG00000002721	rnaseh2b	100	77.885	Poecilia_mexicana
ENSGACG00000002821	rnaseh2b	100	77.564	ENSPREG00000007737	rnaseh2b	100	77.564	Poecilia_reticulata
ENSGACG00000002821	rnaseh2b	88	50.542	ENSPPYG00000005378	RNASEH2B	86	50.542	Pongo_abelii
ENSGACG00000002821	rnaseh2b	88	50.542	ENSPCOG00000026623	RNASEH2B	87	50.542	Propithecus_coquereli
ENSGACG00000002821	rnaseh2b	79	48.800	ENSPVAG00000000508	RNASEH2B	92	48.800	Pteropus_vampyrus
ENSGACG00000002821	rnaseh2b	100	77.564	ENSPNYG00000013552	rnaseh2b	100	77.564	Pundamilia_nyererei
ENSGACG00000002821	rnaseh2b	99	66.987	ENSPNAG00000024825	rnaseh2b	99	66.987	Pygocentrus_nattereri
ENSGACG00000002821	rnaseh2b	90	50.175	ENSRNOG00000009192	Rnaseh2b	90	50.175	Rattus_norvegicus
ENSGACG00000002821	rnaseh2b	90	49.470	ENSRBIG00000028928	-	89	49.470	Rhinopithecus_bieti
ENSGACG00000002821	rnaseh2b	89	44.086	ENSRBIG00000036017	-	89	44.086	Rhinopithecus_bieti
ENSGACG00000002821	rnaseh2b	90	49.470	ENSRROG00000018808	-	89	49.470	Rhinopithecus_roxellana
ENSGACG00000002821	rnaseh2b	72	40.444	ENSRROG00000044915	-	83	40.444	Rhinopithecus_roxellana
ENSGACG00000002821	rnaseh2b	90	49.823	ENSSBOG00000008081	RNASEH2B	96	51.095	Saimiri_boliviensis_boliviensis
ENSGACG00000002821	rnaseh2b	100	53.968	ENSSHAG00000016190	RNASEH2B	100	54.633	Sarcophilus_harrisii
ENSGACG00000002821	rnaseh2b	99	66.346	ENSSFOG00015010190	rnaseh2b	100	66.346	Scleropages_formosus
ENSGACG00000002821	rnaseh2b	100	77.885	ENSSMAG00000001546	rnaseh2b	100	77.885	Scophthalmus_maximus
ENSGACG00000002821	rnaseh2b	100	82.051	ENSSDUG00000007567	rnaseh2b	100	82.051	Seriola_dumerili
ENSGACG00000002821	rnaseh2b	100	80.449	ENSSLDG00000012485	rnaseh2b	100	80.449	Seriola_lalandi_dorsalis
ENSGACG00000002821	rnaseh2b	86	54.074	ENSSPUG00000006745	-	95	54.074	Sphenodon_punctatus
ENSGACG00000002821	rnaseh2b	100	82.051	ENSSPAG00000020926	rnaseh2b	100	82.051	Stegastes_partitus
ENSGACG00000002821	rnaseh2b	87	50.545	ENSSSCG00000024385	RNASEH2B	96	52.569	Sus_scrofa
ENSGACG00000002821	rnaseh2b	88	61.372	ENSTGUG00000012104	RNASEH2B	99	61.372	Taeniopygia_guttata
ENSGACG00000002821	rnaseh2b	100	76.282	ENSTRUG00000015098	rnaseh2b	100	76.282	Takifugu_rubripes
ENSGACG00000002821	rnaseh2b	100	77.244	ENSTNIG00000013861	rnaseh2b	100	77.244	Tetraodon_nigroviridis
ENSGACG00000002821	rnaseh2b	90	42.958	ENSTTRG00000010761	RNASEH2B	90	43.662	Tursiops_truncatus
ENSGACG00000002821	rnaseh2b	90	50.530	ENSUAMG00000022849	RNASEH2B	96	51.460	Ursus_americanus
ENSGACG00000002821	rnaseh2b	90	49.823	ENSUMAG00000018556	RNASEH2B	96	50.730	Ursus_maritimus
ENSGACG00000002821	rnaseh2b	87	51.460	ENSVPAG00000005679	RNASEH2B	92	51.460	Vicugna_pacos
ENSGACG00000002821	rnaseh2b	90	49.823	ENSVVUG00000024015	RNASEH2B	83	50.530	Vulpes_vulpes
ENSGACG00000002821	rnaseh2b	99	55.272	ENSXETG00000020720	rnaseh2b	100	55.272	Xenopus_tropicalis
ENSGACG00000002821	rnaseh2b	100	76.603	ENSXCOG00000018732	rnaseh2b	100	76.603	Xiphophorus_couchianus
ENSGACG00000002821	rnaseh2b	100	77.885	ENSXMAG00000022554	rnaseh2b	100	77.885	Xiphophorus_maculatus