EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000002829 (Gene tree)
Gene ID: -
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR domain containing 14
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3108 bases
Position: chrgroupXXI:6960347-6963454
Accession: ZDB-GENE-030131-2709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003704	zf-C2H2	PF00096.26	5.3e-19	1	2
ENSGACP00000003704	zf-C2H2	PF00096.26	5.3e-19	2	2
ENSGACP00000003704	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003716	-	1380	-	ENSGACP00000003704	441 (aa)	-	G3NEF3

Gene Model

Click here to download ENSGACG00000002829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000002829	prdm14	70	32.222	ENSGACG00000020205	PRDM15	56	32.292
ENSGACG00000002829	prdm14	54	39.456	ENSGACG00000001371	-	99	39.456
ENSGACG00000002829	prdm14	69	33.456	ENSGACG00000016713	prdm12b	60	33.456
ENSGACG00000002829	prdm14	52	41.135	ENSGACG00000010515	ZNF628	96	41.135
ENSGACG00000002829	prdm14	50	39.091	ENSGACG00000009449	znf526	61	39.091
ENSGACG00000002829	prdm14	50	43.210	ENSGACG00000005553	znf236	98	38.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002829	prdm14	100	60.352	ENSACIG00000022698	prdm14	82	64.683	Amphilophus_citrinellus
ENSGACG00000002829	prdm14	100	59.922	ENSACLG00000025407	prdm14	82	65.753	Astatotilapia_calliptera
ENSGACG00000002829	prdm14	75	66.667	ENSAMXG00000000512	prdm14	90	62.322	Astyanax_mexicanus
ENSGACG00000002829	prdm14	90	54.102	ENSBTAG00000000060	PRDM14	74	54.102	Bos_taurus
ENSGACG00000002829	prdm14	90	53.097	ENSCHIG00000009297	PRDM14	74	53.097	Capra_hircus
ENSGACG00000002829	prdm14	79	57.531	ENSTSYG00000010610	PRDM14	97	57.778	Carlito_syrichta
ENSGACG00000002829	prdm14	74	58.047	ENSCPOG00000027176	PRDM14	73	58.047	Cavia_porcellus
ENSGACG00000002829	prdm14	78	49.118	ENSCCAG00000026032	PRDM14	66	51.134	Cebus_capucinus
ENSGACG00000002829	prdm14	85	53.596	ENSCLAG00000001937	PRDM14	74	53.596	Chinchilla_lanigera
ENSGACG00000002829	prdm14	100	71.485	ENSHBUG00000019660	prdm14	83	72.763	Haplochromis_burtoni
ENSGACG00000002829	prdm14	100	71.344	ENSMZEG00005021597	prdm14	83	72.817	Maylandia_zebra
ENSGACG00000002829	prdm14	100	70.949	ENSNBRG00000023669	prdm14	83	72.421	Neolamprologus_brichardi
ENSGACG00000002829	prdm14	74	57.330	ENSODEG00000003245	PRDM14	68	57.330	Octodon_degus
ENSGACG00000002829	prdm14	90	53.319	ENSOARG00000003528	PRDM14	86	53.319	Ovis_aries
ENSGACG00000002829	prdm14	100	70.891	ENSPNYG00000001938	prdm14	83	72.167	Pundamilia_nyererei
ENSGACG00000002829	prdm14	100	73.016	ENSSDUG00000013311	prdm14	83	73.214	Seriola_dumerili
ENSGACG00000002829	prdm14	100	73.413	ENSSLDG00000006506	prdm14	83	73.611	Seriola_lalandi_dorsalis
ENSGACG00000002829	prdm14	73	73.867	ENSTNIG00000008194	prdm14	99	73.867	Tetraodon_nigroviridis