EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000002935 (Gene tree)
Gene ID: -
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3297 bases
Position: chrgroupX:3318408-3321704
Accession: ZDB-GENE-040718-69
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003841	RRM_1	PF00076.22	5.6e-11	1	1
ENSGACP00000003845	RRM_1	PF00076.22	6.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003854	-	1239	-	ENSGACP00000003841	331 (aa)	-	G3NEU0
ENSGACT00000003858	-	1197	-	ENSGACP00000003845	361 (aa)	-	G3NEU4

Gene Model

Click here to download ENSGACG00000002935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000002935's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000002935	nelfe	99	66.667	ENSG00000204356	NELFE	91	74.483	Homo_sapiens
ENSGACG00000002935	nelfe	100	83.747	ENSATEG00000007587	nelfe	89	84.022	Anabas_testudineus
ENSGACG00000002935	nelfe	99	65.405	ENSANAG00000038256	NELFE	98	62.032	Aotus_nancymaae
ENSGACG00000002935	nelfe	99	65.135	ENSCJAG00000002368	-	97	61.497	Callithrix_jacchus
ENSGACG00000002935	nelfe	99	66.484	ENSCAFG00020000938	NELFE	98	61.685	Canis_lupus_dingo
ENSGACG00000002935	nelfe	99	66.389	ENSCHIG00000013713	NELFE	98	62.602	Capra_hircus
ENSGACG00000002935	nelfe	100	63.255	ENSTSYG00000012132	-	98	60.156	Carlito_syrichta
ENSGACG00000002935	nelfe	98	61.096	ENSCAPG00000015145	NELFE	90	60.526	Cavia_aperea
ENSGACG00000002935	nelfe	99	63.710	ENSCPOG00000031829	NELFE	98	62.234	Cavia_porcellus
ENSGACG00000002935	nelfe	99	64.439	ENSCCAG00000014945	NELFE	98	61.111	Cebus_capucinus
ENSGACG00000002935	nelfe	99	65.217	ENSCATG00000028969	NELFE	98	61.559	Cercocebus_atys
ENSGACG00000002935	nelfe	99	64.674	ENSCLAG00000009684	NELFE	98	60.484	Chinchilla_lanigera
ENSGACG00000002935	nelfe	99	64.324	ENSCSAG00000008969	NELFE	98	58.824	Chlorocebus_sabaeus
ENSGACG00000002935	nelfe	84	60.261	ENSCPBG00000000225	NELFE	97	56.209	Chrysemys_picta_bellii
ENSGACG00000002935	nelfe	99	65.135	ENSCANG00000022451	NELFE	98	61.497	Colobus_angolensis_palliatus
ENSGACG00000002935	nelfe	100	64.191	ENSCGRG00001016608	Nelfe	100	63.215	Cricetulus_griseus_chok1gshd
ENSGACG00000002935	nelfe	93	62.890	ENSCGRG00000014034	Nelfe	93	58.017	Cricetulus_griseus_crigri
ENSGACG00000002935	nelfe	100	85.042	ENSCVAG00000003087	nelfe	99	81.322	Cyprinodon_variegatus
ENSGACG00000002935	nelfe	100	77.562	ENSDARG00000004343	nelfe	99	77.839	Danio_rerio
ENSGACG00000002935	nelfe	92	57.738	ENSDNOG00000006996	-	94	54.848	Dasypus_novemcinctus
ENSGACG00000002935	nelfe	50	67.665	ENSDORG00000011705	Nelfe	98	55.928	Dipodomys_ordii
ENSGACG00000002935	nelfe	87	60.947	ENSEBUG00000017070	nelfe	97	60.714	Eptatretus_burgeri
ENSGACG00000002935	nelfe	99	62.663	ENSEASG00005015538	NELFE	98	59.173	Equus_asinus_asinus
ENSGACG00000002935	nelfe	99	64.785	ENSECAG00000012274	NELFE	85	61.170	Equus_caballus
ENSGACG00000002935	nelfe	69	77.381	ENSEEUG00000005004	NELFE	77	77.381	Erinaceus_europaeus
ENSGACG00000002935	nelfe	100	72.176	ENSELUG00000005830	nelfe	100	74.930	Esox_lucius
ENSGACG00000002935	nelfe	99	65.135	ENSFCAG00000004518	NELFE	98	62.567	Felis_catus
ENSGACG00000002935	nelfe	98	60.056	ENSFDAG00000011589	NELFE	100	62.228	Fukomys_damarensis
ENSGACG00000002935	nelfe	100	72.376	ENSGMOG00000005973	nelfe	100	71.105	Gadus_morhua
ENSGACG00000002935	nelfe	99	64.634	ENSGALG00000045676	NELFE	95	72.656	Gallus_gallus
ENSGACG00000002935	nelfe	99	65.294	ENSGAGG00000005411	NELFE	100	63.050	Gopherus_agassizii
ENSGACG00000002935	nelfe	99	66.209	ENSGGOG00000002265	NELFE	98	62.500	Gorilla_gorilla
ENSGACG00000002935	nelfe	73	58.052	ENSHGLG00000016601	NELFE	92	56.458	Heterocephalus_glaber_female
ENSGACG00000002935	nelfe	99	56.389	ENSHGLG00100014073	NELFE	98	57.910	Heterocephalus_glaber_male
ENSGACG00000002935	nelfe	100	81.501	ENSHCOG00000007147	nelfe	97	81.769	Hippocampus_comes
ENSGACG00000002935	nelfe	99	65.301	ENSSTOG00000027409	NELFE	98	61.622	Ictidomys_tridecemlineatus
ENSGACG00000002935	nelfe	93	61.696	ENSJJAG00000014005	Nelfe	92	55.952	Jaculus_jaculus
ENSGACG00000002935	nelfe	84	91.129	ENSKMAG00000002391	nelfe	99	82.306	Kryptolebias_marmoratus
ENSGACG00000002935	nelfe	99	67.297	ENSLAFG00000028155	NELFE	99	61.877	Loxodonta_africana
ENSGACG00000002935	nelfe	98	57.465	ENSMFAG00000031089	-	98	58.896	Macaca_fascicularis
ENSGACG00000002935	nelfe	99	65.135	ENSMFAG00000036108	-	98	61.230	Macaca_fascicularis
ENSGACG00000002935	nelfe	99	65.952	ENSMMUG00000000735	-	98	61.230	Macaca_mulatta
ENSGACG00000002935	nelfe	95	60.188	ENSMMUG00000041521	-	100	58.308	Macaca_mulatta
ENSGACG00000002935	nelfe	99	65.574	ENSMNEG00000032542	NELFE	98	61.892	Macaca_nemestrina
ENSGACG00000002935	nelfe	99	65.217	ENSMLEG00000030245	NELFE	98	61.559	Mandrillus_leucophaeus
ENSGACG00000002935	nelfe	86	93.023	ENSMAMG00000003031	nelfe	89	86.441	Mastacembelus_armatus
ENSGACG00000002935	nelfe	79	69.048	ENSMGAG00000001297	NELFE	75	69.048	Meleagris_gallopavo
ENSGACG00000002935	nelfe	100	61.202	ENSMAUG00000016812	Nelfe	100	63.115	Mesocricetus_auratus
ENSGACG00000002935	nelfe	100	66.482	ENSMICG00000003287	NELFE	98	62.088	Microcebus_murinus
ENSGACG00000002935	nelfe	100	65.499	ENSMOCG00000003723	Nelfe	100	61.186	Microtus_ochrogaster
ENSGACG00000002935	nelfe	99	79.472	ENSMMOG00000014544	nelfe	100	80.938	Mola_mola
ENSGACG00000002935	nelfe	99	61.212	ENSMODG00000015063	NELFE	98	62.310	Monodelphis_domestica
ENSGACG00000002935	nelfe	52	66.082	ENSMUSG00000024369	Nelfe	100	61.580	Mus_musculus
ENSGACG00000002935	nelfe	52	66.082	MGP_PahariEiJ_G0020473	Nelfe	100	61.247	Mus_pahari
ENSGACG00000002935	nelfe	99	64.785	ENSMPUG00000010581	NELFE	97	60.638	Mustela_putorius_furo
ENSGACG00000002935	nelfe	99	67.500	ENSMLUG00000000622	-	97	63.085	Myotis_lucifugus
ENSGACG00000002935	nelfe	100	56.150	ENSMLUG00000028069	-	97	52.267	Myotis_lucifugus
ENSGACG00000002935	nelfe	100	65.123	ENSNGAG00000016248	Nelfe	100	64.246	Nannospalax_galili
ENSGACG00000002935	nelfe	99	55.882	ENSMEUG00000006053	NELFE	98	52.381	Notamacropus_eugenii
ENSGACG00000002935	nelfe	99	66.757	ENSODEG00000017670	NELFE	99	61.351	Octodon_degus
ENSGACG00000002935	nelfe	99	82.036	ENSONIG00000013513	nelfe	99	81.717	Oreochromis_niloticus
ENSGACG00000002935	nelfe	99	65.054	ENSOGAG00000009574	NELFE	97	62.299	Otolemur_garnettii
ENSGACG00000002935	nelfe	99	66.667	ENSOARG00000002616	NELFE	97	63.288	Ovis_aries
ENSGACG00000002935	nelfe	99	64.785	ENSPPAG00000039942	NELFE	98	60.904	Pan_paniscus
ENSGACG00000002935	nelfe	99	65.135	ENSPPRG00000004421	NELFE	98	61.230	Panthera_pardus
ENSGACG00000002935	nelfe	99	65.135	ENSPTIG00000003753	NELFE	98	61.230	Panthera_tigris_altaica
ENSGACG00000002935	nelfe	99	64.516	ENSPTRG00000017996	NELFE	98	60.638	Pan_troglodytes
ENSGACG00000002935	nelfe	99	65.217	ENSPANG00000019366	NELFE	98	61.559	Papio_anubis
ENSGACG00000002935	nelfe	100	79.224	ENSPKIG00000012048	nelfe	100	77.681	Paramormyrops_kingsleyae
ENSGACG00000002935	nelfe	76	90.984	ENSPMGG00000019716	nelfe	99	77.089	Periophthalmus_magnuspinnatus
ENSGACG00000002935	nelfe	99	64.785	ENSPPYG00000016471	NELFE	98	60.638	Pongo_abelii
ENSGACG00000002935	nelfe	100	66.846	ENSPCOG00000024944	NELFE	98	61.559	Propithecus_coquereli
ENSGACG00000002935	nelfe	86	86.822	ENSPNAG00000011802	nelfe	100	68.182	Pygocentrus_nattereri
ENSGACG00000002935	nelfe	52	66.082	ENSRNOG00000000420	Nelfe	100	60.434	Rattus_norvegicus
ENSGACG00000002935	nelfe	95	57.229	ENSRBIG00000028905	-	98	60.360	Rhinopithecus_bieti
ENSGACG00000002935	nelfe	99	63.684	ENSRBIG00000028593	-	98	59.635	Rhinopithecus_bieti
ENSGACG00000002935	nelfe	99	64.785	ENSRROG00000041993	NELFE	98	61.170	Rhinopithecus_roxellana
ENSGACG00000002935	nelfe	99	65.135	ENSSBOG00000035865	NELFE	97	61.333	Saimiri_boliviensis_boliviensis
ENSGACG00000002935	nelfe	99	62.500	ENSSHAG00000008908	NELFE	98	58.684	Sarcophilus_harrisii
ENSGACG00000002935	nelfe	100	79.620	ENSSFOG00015017039	nelfe	99	79.620	Scleropages_formosus
ENSGACG00000002935	nelfe	100	64.641	ENSSPUG00000012971	NELFE	100	64.183	Sphenodon_punctatus