EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000003011 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1927 bases
Position: chrgroupXX:267052-268978
Accession: 10380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003946	Ribosom_S12_S23	PF00164.25	9.1e-25	1	1
ENSGACP00000003948	Ribosom_S12_S23	PF00164.25	2.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000003962	-	450	-	ENSGACP00000003948	150 (aa)	-	G3NF47
ENSGACT00000003960	-	742	-	ENSGACP00000003946	111 (aa)	-	G3NF45

Gene Model

Click here to download ENSGACG00000003011's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003011's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000003011	si:dkey-17e16.10	67	41.463	ENSGACG00000003895	rps23	57	41.463

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSG00000128626	MRPS12	80	78.182	Homo_sapiens
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSAPOG00000005047	si:dkey-17e16.10	99	75.177	Acanthochromis_polyacanthus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSAMEG00000008722	MRPS12	79	80.909	Ailuropoda_melanoleuca
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSACIG00000016095	si:dkey-17e16.10	99	75.887	Amphilophus_citrinellus
ENSGACG00000003011	si:dkey-17e16.10	100	90.991	ENSAOCG00000018530	si:dkey-17e16.10	99	74.468	Amphiprion_ocellaris
ENSGACG00000003011	si:dkey-17e16.10	100	90.991	ENSAPEG00000019785	si:dkey-17e16.10	99	74.468	Amphiprion_percula
ENSGACG00000003011	si:dkey-17e16.10	100	96.396	ENSATEG00000018924	si:dkey-17e16.10	99	78.723	Anabas_testudineus
ENSGACG00000003011	si:dkey-17e16.10	98	74.312	ENSAPLG00000014350	-	73	74.312	Anas_platyrhynchos
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSAPLG00000011925	-	97	71.429	Anas_platyrhynchos
ENSGACG00000003011	si:dkey-17e16.10	99	83.636	ENSACAG00000003829	MRPS12	92	71.852	Anolis_carolinensis
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSANAG00000033654	MRPS12	79	80.000	Aotus_nancymaae
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSACLG00000013979	si:dkey-17e16.10	92	76.978	Astatotilapia_calliptera
ENSGACG00000003011	si:dkey-17e16.10	100	82.883	ENSAMXG00000025945	si:dkey-17e16.10	99	65.972	Astyanax_mexicanus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSBTAG00000001782	MRPS12	79	80.909	Bos_taurus
ENSGACG00000003011	si:dkey-17e16.10	87	59.596	WBGene00011391	mrps-12	70	56.364	Caenorhabditis_elegans
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSCJAG00000043176	MRPS12	80	78.378	Callithrix_jacchus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSCAFG00000005623	MRPS12	80	81.982	Canis_familiaris
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSCAFG00020016784	MRPS12	80	81.982	Canis_lupus_dingo
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSCHIG00000013852	MRPS12	79	80.909	Capra_hircus
ENSGACG00000003011	si:dkey-17e16.10	98	80.734	ENSTSYG00000009568	MRPS12	80	80.909	Carlito_syrichta
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSCAPG00000009543	MRPS12	90	73.810	Cavia_aperea
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSCPOG00000035217	MRPS12	80	80.180	Cavia_porcellus
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSCCAG00000035388	MRPS12	84	73.950	Cebus_capucinus
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSCATG00000038438	MRPS12	84	74.167	Cercocebus_atys
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSCLAG00000013286	MRPS12	80	79.279	Chinchilla_lanigera
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSCSAG00000003929	MRPS12	84	74.167	Chlorocebus_sabaeus
ENSGACG00000003011	si:dkey-17e16.10	77	84.884	ENSCHOG00000008451	MRPS12	62	84.884	Choloepus_hoffmanni
ENSGACG00000003011	si:dkey-17e16.10	99	82.727	ENSCPBG00000018941	MRPS12	71	82.883	Chrysemys_picta_bellii
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSCANG00000003652	MRPS12	84	74.167	Colobus_angolensis_palliatus
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSCGRG00001018968	Mrps12	80	79.279	Cricetulus_griseus_chok1gshd
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSCGRG00000007113	Mrps12	80	79.279	Cricetulus_griseus_crigri
ENSGACG00000003011	si:dkey-17e16.10	100	91.892	ENSCSEG00000001174	si:dkey-17e16.10	97	74.820	Cynoglossus_semilaevis
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSCVAG00000003253	si:dkey-17e16.10	99	77.305	Cyprinodon_variegatus
ENSGACG00000003011	si:dkey-17e16.10	100	88.288	ENSDARG00000089836	MRPS12	99	73.050	Danio_rerio
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSDNOG00000003918	MRPS12	88	73.228	Dasypus_novemcinctus
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSDORG00000001544	Mrps12	79	79.091	Dipodomys_ordii
ENSGACG00000003011	si:dkey-17e16.10	100	63.248	FBgn0003714	tko	79	63.248	Drosophila_melanogaster
ENSGACG00000003011	si:dkey-17e16.10	99	82.727	ENSETEG00000017985	MRPS12	80	81.982	Echinops_telfairi
ENSGACG00000003011	si:dkey-17e16.10	99	84.545	ENSEBUG00000003529	si:dkey-17e16.10	63	84.545	Eptatretus_burgeri
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSEASG00005019736	MRPS12	79	81.818	Equus_asinus_asinus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSECAG00000013794	MRPS12	79	81.818	Equus_caballus
ENSGACG00000003011	si:dkey-17e16.10	58	71.875	ENSEEUG00000013868	MRPS12	66	73.016	Erinaceus_europaeus
ENSGACG00000003011	si:dkey-17e16.10	99	94.545	ENSELUG00000014973	si:dkey-17e16.10	77	94.595	Esox_lucius
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSFCAG00000014573	MRPS12	79	80.000	Felis_catus
ENSGACG00000003011	si:dkey-17e16.10	98	75.229	ENSFALG00000015276	MRPS12	95	75.229	Ficedula_albicollis
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSFDAG00000008482	MRPS12	80	77.477	Fukomys_damarensis
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSFHEG00000004575	si:dkey-17e16.10	78	94.595	Fundulus_heteroclitus
ENSGACG00000003011	si:dkey-17e16.10	99	93.636	ENSGMOG00000020611	si:dkey-17e16.10	100	93.694	Gadus_morhua
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSGALG00000038667	MRPS12	82	81.081	Gallus_gallus
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSGAFG00000007521	si:dkey-17e16.10	98	78.417	Gambusia_affinis
ENSGACG00000003011	si:dkey-17e16.10	98	84.404	ENSGAGG00000009748	MRPS12	71	84.545	Gopherus_agassizii
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSGGOG00000002500	MRPS12	80	78.182	Gorilla_gorilla
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSHBUG00000014480	si:dkey-17e16.10	78	94.595	Haplochromis_burtoni
ENSGACG00000003011	si:dkey-17e16.10	100	75.676	ENSHGLG00000014942	MRPS12	79	75.676	Heterocephalus_glaber_female
ENSGACG00000003011	si:dkey-17e16.10	100	75.676	ENSHGLG00100017710	MRPS12	79	75.676	Heterocephalus_glaber_male
ENSGACG00000003011	si:dkey-17e16.10	100	90.991	ENSHCOG00000010444	si:dkey-17e16.10	99	69.481	Hippocampus_comes
ENSGACG00000003011	si:dkey-17e16.10	100	93.694	ENSIPUG00000024651	MRPS12	99	77.305	Ictalurus_punctatus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSSTOG00000009006	MRPS12	83	79.130	Ictidomys_tridecemlineatus
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSJJAG00000017837	Mrps12	79	78.182	Jaculus_jaculus
ENSGACG00000003011	si:dkey-17e16.10	100	90.991	ENSKMAG00000007949	si:dkey-17e16.10	70	90.991	Kryptolebias_marmoratus
ENSGACG00000003011	si:dkey-17e16.10	100	93.694	ENSLBEG00000001112	si:dkey-17e16.10	79	93.694	Labrus_bergylta
ENSGACG00000003011	si:dkey-17e16.10	99	86.364	ENSLACG00000018393	MRPS12	69	86.364	Latimeria_chalumnae
ENSGACG00000003011	si:dkey-17e16.10	100	81.982	ENSLOCG00000000535	si:dkey-17e16.10	77	81.982	Lepisosteus_oculatus
ENSGACG00000003011	si:dkey-17e16.10	99	77.273	ENSLAFG00000022140	MRPS12	79	77.273	Loxodonta_africana
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSMFAG00000044563	MRPS12	79	80.000	Macaca_fascicularis
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSMNEG00000040379	MRPS12	84	74.167	Macaca_nemestrina
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSMLEG00000036963	MRPS12	84	74.167	Mandrillus_leucophaeus
ENSGACG00000003011	si:dkey-17e16.10	100	93.694	ENSMAMG00000017962	si:dkey-17e16.10	79	93.694	Mastacembelus_armatus
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSMZEG00005017336	si:dkey-17e16.10	97	76.978	Maylandia_zebra
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSMGAG00000005414	MRPS12	88	71.429	Meleagris_gallopavo
ENSGACG00000003011	si:dkey-17e16.10	67	81.081	ENSMAUG00000019146	Mrps12	72	81.081	Mesocricetus_auratus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSMICG00000045111	MRPS12	80	80.180	Microcebus_murinus
ENSGACG00000003011	si:dkey-17e16.10	98	81.651	ENSMOCG00000012666	Mrps12	82	80.909	Microtus_ochrogaster
ENSGACG00000003011	si:dkey-17e16.10	100	93.694	ENSMMOG00000010803	si:dkey-17e16.10	79	92.174	Mola_mola
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSMODG00000013431	MRPS12	95	67.391	Monodelphis_domestica
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSMALG00000004190	si:dkey-17e16.10	99	75.887	Monopterus_albus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	MGP_CAROLIEiJ_G0029457	Mrps12	83	80.769	Mus_caroli
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSMUSG00000045948	Mrps12	83	80.769	Mus_musculus
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	MGP_PahariEiJ_G0012691	Mrps12	83	79.808	Mus_pahari
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	MGP_SPRETEiJ_G0030553	Mrps12	83	80.769	Mus_spretus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSMPUG00000017750	MRPS12	82	81.818	Mustela_putorius_furo
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSMLUG00000006076	MRPS12	79	80.909	Myotis_lucifugus
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSNGAG00000022099	Mrps12	80	79.279	Nannospalax_galili
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSNBRG00000007244	si:dkey-17e16.10	97	76.978	Neolamprologus_brichardi
ENSGACG00000003011	si:dkey-17e16.10	99	75.455	ENSMEUG00000005688	MRPS12	99	74.775	Notamacropus_eugenii
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSODEG00000016161	MRPS12	84	79.279	Octodon_degus
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSONIG00000002022	si:dkey-17e16.10	97	76.978	Oreochromis_niloticus
ENSGACG00000003011	si:dkey-17e16.10	98	80.734	ENSOCUG00000000689	MRPS12	79	80.734	Oryctolagus_cuniculus
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSORLG00000007040	si:dkey-17e16.10	97	80.882	Oryzias_latipes
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSORLG00020011268	MRPS12	97	80.882	Oryzias_latipes_hni
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSORLG00015009378	MRPS12	97	80.882	Oryzias_latipes_hsok
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSOMEG00000001427	si:dkey-17e16.10	81	94.690	Oryzias_melastigma
ENSGACG00000003011	si:dkey-17e16.10	99	73.636	ENSOGAG00000025634	-	88	68.033	Otolemur_garnettii
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSOGAG00000008295	-	88	75.410	Otolemur_garnettii
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSOARG00000005927	MRPS12	79	80.909	Ovis_aries
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSPPAG00000041637	MRPS12	80	78.182	Pan_paniscus
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSPPRG00000011742	MRPS12	79	80.000	Panthera_pardus
ENSGACG00000003011	si:dkey-17e16.10	79	84.091	ENSPTIG00000008427	MRPS12	80	78.571	Panthera_tigris_altaica
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSPTRG00000010948	MRPS12	80	78.182	Pan_troglodytes
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSPANG00000021673	MRPS12	80	78.378	Papio_anubis
ENSGACG00000003011	si:dkey-17e16.10	100	89.189	ENSPKIG00000006716	si:dkey-17e16.10	99	72.297	Paramormyrops_kingsleyae
ENSGACG00000003011	si:dkey-17e16.10	99	84.545	ENSPSIG00000014383	MRPS12	73	84.685	Pelodiscus_sinensis
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSPMGG00000009631	si:dkey-17e16.10	78	92.793	Periophthalmus_magnuspinnatus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSPEMG00000016700	Mrps12	80	80.180	Peromyscus_maniculatus_bairdii
ENSGACG00000003011	si:dkey-17e16.10	97	75.926	ENSPMAG00000008051	si:dkey-17e16.10	70	75.926	Petromyzon_marinus
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSPCIG00000010531	-	78	79.091	Phascolarctos_cinereus
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSPFOG00000018863	si:dkey-17e16.10	99	75.177	Poecilia_formosa
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSPLAG00000008933	si:dkey-17e16.10	99	75.177	Poecilia_latipinna
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSPMEG00000005155	si:dkey-17e16.10	94	75.177	Poecilia_mexicana
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSPREG00000014123	si:dkey-17e16.10	75	92.793	Poecilia_reticulata
ENSGACG00000003011	si:dkey-17e16.10	98	78.899	ENSPPYG00000009950	MRPS12	80	78.182	Pongo_abelii
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSPCAG00000010853	MRPS12	80	78.182	Procavia_capensis
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSPCOG00000020370	MRPS12	80	80.180	Propithecus_coquereli
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSPVAG00000011605	MRPS12	79	78.182	Pteropus_vampyrus
ENSGACG00000003011	si:dkey-17e16.10	100	94.595	ENSPNYG00000015506	si:dkey-17e16.10	92	76.978	Pundamilia_nyererei
ENSGACG00000003011	si:dkey-17e16.10	100	90.090	ENSPNAG00000016315	si:dkey-17e16.10	74	90.090	Pygocentrus_nattereri
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSRNOG00000019949	Mrps12	80	81.081	Rattus_norvegicus
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSRBIG00000029741	MRPS12	84	74.167	Rhinopithecus_bieti
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSRROG00000030787	MRPS12	84	74.167	Rhinopithecus_roxellana
ENSGACG00000003011	si:dkey-17e16.10	99	80.000	ENSSBOG00000025707	MRPS12	79	80.000	Saimiri_boliviensis_boliviensis
ENSGACG00000003011	si:dkey-17e16.10	100	88.288	ENSSFOG00015018102	mrps12	93	74.436	Scleropages_formosus
ENSGACG00000003011	si:dkey-17e16.10	100	93.694	ENSSMAG00000004249	si:dkey-17e16.10	99	75.887	Scophthalmus_maximus
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSSDUG00000020424	si:dkey-17e16.10	99	74.825	Seriola_dumerili
ENSGACG00000003011	si:dkey-17e16.10	100	92.793	ENSSLDG00000016320	si:dkey-17e16.10	99	74.825	Seriola_lalandi_dorsalis
ENSGACG00000003011	si:dkey-17e16.10	99	78.182	ENSSARG00000006985	MRPS12	80	78.378	Sorex_araneus
ENSGACG00000003011	si:dkey-17e16.10	98	82.569	ENSSPUG00000004675	MRPS12	71	82.569	Sphenodon_punctatus
ENSGACG00000003011	si:dkey-17e16.10	100	90.090	ENSSPAG00000012951	si:dkey-17e16.10	99	73.050	Stegastes_partitus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSSSCG00000031860	MRPS12	87	81.818	Sus_scrofa
ENSGACG00000003011	si:dkey-17e16.10	99	75.455	ENSTGUG00000016491	MRPS12	100	75.455	Taeniopygia_guttata
ENSGACG00000003011	si:dkey-17e16.10	100	90.991	ENSTRUG00000017342	si:dkey-17e16.10	78	90.991	Takifugu_rubripes
ENSGACG00000003011	si:dkey-17e16.10	99	91.818	ENSTNIG00000004898	si:dkey-17e16.10	81	91.892	Tetraodon_nigroviridis
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSTBEG00000001288	MRPS12	80	80.180	Tupaia_belangeri
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSTTRG00000011794	MRPS12	79	80.909	Tursiops_truncatus
ENSGACG00000003011	si:dkey-17e16.10	99	79.091	ENSUAMG00000011626	MRPS12	79	79.091	Ursus_americanus
ENSGACG00000003011	si:dkey-17e16.10	99	80.909	ENSUMAG00000019235	MRPS12	79	80.909	Ursus_maritimus
ENSGACG00000003011	si:dkey-17e16.10	99	81.818	ENSVVUG00000006433	MRPS12	58	80.000	Vulpes_vulpes
ENSGACG00000003011	si:dkey-17e16.10	99	83.636	ENSXETG00000005326	mrps12	89	71.429	Xenopus_tropicalis
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSXCOG00000020766	si:dkey-17e16.10	75	95.495	Xiphophorus_couchianus
ENSGACG00000003011	si:dkey-17e16.10	100	95.495	ENSXMAG00000027119	si:dkey-17e16.10	78	95.495	Xiphophorus_maculatus