EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000003044 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 6560 bases
Position: chrgroupVI:2529768-2536327
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000003997	KH_1	PF00013.29	1.2e-51	1	3
ENSGACP00000003997	KH_1	PF00013.29	1.2e-51	2	3
ENSGACP00000003997	KH_1	PF00013.29	1.2e-51	3	3
ENSGACP00000003997	KH_2	PF07650.17	7.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000004011	-	975	-	ENSGACP00000003997	324 (aa)	-	G3NF95

Gene Model

Click here to download ENSGACG00000003044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000003044	zgc:110045	97	69.444	ENSGACG00000006681	PCBP2	97	69.444
ENSGACG00000003044	zgc:110045	69	40.580	ENSGACG00000020175	nova1	85	31.792
ENSGACG00000003044	zgc:110045	95	33.099	ENSGACG00000005991	igf2bp2b	67	30.556
ENSGACG00000003044	zgc:110045	67	38.571	ENSGACG00000012422	KHSRP	56	38.571
ENSGACG00000003044	zgc:110045	98	70.088	ENSGACG00000002266	-	98	70.088
ENSGACG00000003044	zgc:110045	71	33.766	ENSGACG00000016704	fubp3	62	33.766
ENSGACG00000003044	zgc:110045	96	64.630	ENSGACG00000002664	-	75	61.377
ENSGACG00000003044	zgc:110045	97	70.253	ENSGACG00000003197	pcbp2	97	70.253
ENSGACG00000003044	zgc:110045	75	44.286	ENSGACG00000007581	hnrnpk	56	44.286
ENSGACG00000003044	zgc:110045	95	65.130	ENSGACG00000014955	-	95	65.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003044	zgc:110045	99	75.926	ENSG00000183570	PCBP3	99	69.252	Homo_sapiens
ENSGACG00000003044	zgc:110045	100	96.296	ENSAPOG00000023735	zgc:110045	99	96.296	Acanthochromis_polyacanthus
ENSGACG00000003044	zgc:110045	100	84.257	ENSACIG00000002577	zgc:110045	97	90.233	Amphilophus_citrinellus
ENSGACG00000003044	zgc:110045	61	91.960	ENSAOCG00000005266	zgc:110045	93	91.960	Amphiprion_ocellaris
ENSGACG00000003044	zgc:110045	97	95.541	ENSAPEG00000000729	zgc:110045	72	95.541	Amphiprion_percula
ENSGACG00000003044	zgc:110045	95	88.106	ENSATEG00000011191	zgc:110045	65	88.106	Anabas_testudineus
ENSGACG00000003044	zgc:110045	97	95.860	ENSACLG00000019285	zgc:110045	72	95.860	Astatotilapia_calliptera
ENSGACG00000003044	zgc:110045	99	75.926	ENSBTAG00000030775	PCBP3	99	68.421	Bos_taurus
ENSGACG00000003044	zgc:110045	99	71.720	ENSCAFG00000011907	PCBP3	91	71.720	Canis_familiaris
ENSGACG00000003044	zgc:110045	99	69.186	ENSCHIG00000015841	PCBP3	90	69.186	Capra_hircus
ENSGACG00000003044	zgc:110045	70	67.213	ENSTSYG00000005254	PCBP3	95	67.213	Carlito_syrichta
ENSGACG00000003044	zgc:110045	99	55.882	ENSCAPG00000006767	PCBP3	83	55.882	Cavia_aperea
ENSGACG00000003044	zgc:110045	99	71.512	ENSCPOG00000003648	PCBP3	91	71.512	Cavia_porcellus
ENSGACG00000003044	zgc:110045	99	75.926	ENSCCAG00000024561	PCBP3	91	75.926	Cebus_capucinus
ENSGACG00000003044	zgc:110045	99	75.926	ENSCATG00000038419	PCBP3	91	75.926	Cercocebus_atys
ENSGACG00000003044	zgc:110045	99	71.512	ENSCLAG00000006667	PCBP3	91	71.512	Chinchilla_lanigera
ENSGACG00000003044	zgc:110045	99	75.926	ENSCANG00000026757	PCBP3	91	75.926	Colobus_angolensis_palliatus
ENSGACG00000003044	zgc:110045	99	71.512	ENSCGRG00001006836	Pcbp3	91	71.512	Cricetulus_griseus_chok1gshd
ENSGACG00000003044	zgc:110045	99	71.512	ENSCGRG00000001837	Pcbp3	91	71.512	Cricetulus_griseus_crigri
ENSGACG00000003044	zgc:110045	100	93.210	ENSCSEG00000010020	zgc:110045	99	93.210	Cynoglossus_semilaevis
ENSGACG00000003044	zgc:110045	94	87.923	ENSCVAG00000004726	zgc:110045	92	87.923	Cyprinodon_variegatus
ENSGACG00000003044	zgc:110045	66	80.000	ENSDARG00000057141	zgc:110045	96	80.000	Danio_rerio
ENSGACG00000003044	zgc:110045	99	71.512	ENSDNOG00000049518	PCBP3	92	71.512	Dasypus_novemcinctus
ENSGACG00000003044	zgc:110045	66	69.264	ENSDORG00000003640	Pcbp3	93	69.264	Dipodomys_ordii
ENSGACG00000003044	zgc:110045	72	66.953	ENSEBUG00000009697	zgc:110045	99	66.822	Eptatretus_burgeri
ENSGACG00000003044	zgc:110045	99	75.617	ENSEASG00005007068	PCBP3	91	75.617	Equus_asinus_asinus
ENSGACG00000003044	zgc:110045	99	75.617	ENSECAG00000012413	PCBP3	91	75.617	Equus_caballus
ENSGACG00000003044	zgc:110045	97	87.975	ENSELUG00000019784	zgc:110045	72	87.975	Esox_lucius
ENSGACG00000003044	zgc:110045	99	76.235	ENSFCAG00000014812	PCBP3	91	76.235	Felis_catus
ENSGACG00000003044	zgc:110045	99	75.617	ENSFDAG00000009117	PCBP3	91	75.617	Fukomys_damarensis
ENSGACG00000003044	zgc:110045	94	89.950	ENSFHEG00000018838	-	91	89.950	Fundulus_heteroclitus
ENSGACG00000003044	zgc:110045	98	91.277	ENSGMOG00000005953	zgc:110045	98	91.277	Gadus_morhua
ENSGACG00000003044	zgc:110045	94	93.981	ENSGAFG00000017864	zgc:110045	95	93.981	Gambusia_affinis
ENSGACG00000003044	zgc:110045	99	75.926	ENSGGOG00000003683	PCBP3	91	75.926	Gorilla_gorilla
ENSGACG00000003044	zgc:110045	100	95.988	ENSHBUG00000012495	zgc:110045	99	95.988	Haplochromis_burtoni
ENSGACG00000003044	zgc:110045	99	71.512	ENSHGLG00000018620	PCBP3	91	71.512	Heterocephalus_glaber_female
ENSGACG00000003044	zgc:110045	99	71.512	ENSHGLG00100013590	PCBP3	91	71.512	Heterocephalus_glaber_male
ENSGACG00000003044	zgc:110045	100	76.879	ENSHCOG00000000818	zgc:110045	97	88.372	Hippocampus_comes
ENSGACG00000003044	zgc:110045	77	66.926	ENSIPUG00000003932	zgc:110045	95	66.926	Ictalurus_punctatus
ENSGACG00000003044	zgc:110045	99	71.512	ENSSTOG00000007178	PCBP3	91	71.512	Ictidomys_tridecemlineatus
ENSGACG00000003044	zgc:110045	99	71.802	ENSJJAG00000021192	Pcbp3	91	71.802	Jaculus_jaculus
ENSGACG00000003044	zgc:110045	93	92.857	ENSKMAG00000016179	-	95	92.857	Kryptolebias_marmoratus
ENSGACG00000003044	zgc:110045	100	86.804	ENSLBEG00000023074	zgc:110045	99	86.804	Labrus_bergylta
ENSGACG00000003044	zgc:110045	99	69.767	ENSLAFG00000020835	PCBP3	100	73.770	Loxodonta_africana
ENSGACG00000003044	zgc:110045	99	75.926	ENSMFAG00000034574	PCBP3	91	75.926	Macaca_fascicularis
ENSGACG00000003044	zgc:110045	99	75.926	ENSMMUG00000003825	PCBP3	99	70.679	Macaca_mulatta
ENSGACG00000003044	zgc:110045	99	75.926	ENSMNEG00000035551	PCBP3	99	75.926	Macaca_nemestrina
ENSGACG00000003044	zgc:110045	99	75.926	ENSMLEG00000038785	PCBP3	99	68.468	Mandrillus_leucophaeus
ENSGACG00000003044	zgc:110045	97	94.888	ENSMAMG00000014389	zgc:110045	99	94.888	Mastacembelus_armatus
ENSGACG00000003044	zgc:110045	97	95.860	ENSMZEG00005011785	zgc:110045	72	95.860	Maylandia_zebra
ENSGACG00000003044	zgc:110045	99	71.221	ENSMAUG00000007036	Pcbp3	91	71.221	Mesocricetus_auratus
ENSGACG00000003044	zgc:110045	99	75.617	ENSMICG00000012679	PCBP3	91	75.617	Microcebus_murinus
ENSGACG00000003044	zgc:110045	99	71.512	ENSMOCG00000016127	Pcbp3	91	71.512	Microtus_ochrogaster
ENSGACG00000003044	zgc:110045	61	89.447	ENSMMOG00000008399	zgc:110045	94	89.447	Mola_mola
ENSGACG00000003044	zgc:110045	60	88.265	ENSMALG00000008763	zgc:110045	94	88.265	Monopterus_albus
ENSGACG00000003044	zgc:110045	99	71.720	MGP_CAROLIEiJ_G0015475	Pcbp3	99	73.043	Mus_caroli
ENSGACG00000003044	zgc:110045	99	71.720	ENSMUSG00000001120	Pcbp3	99	73.043	Mus_musculus
ENSGACG00000003044	zgc:110045	99	71.720	MGP_PahariEiJ_G0030889	Pcbp3	99	73.043	Mus_pahari
ENSGACG00000003044	zgc:110045	99	71.720	MGP_SPRETEiJ_G0016288	Pcbp3	99	73.043	Mus_spretus
ENSGACG00000003044	zgc:110045	99	71.512	ENSMLUG00000003074	PCBP3	91	71.512	Myotis_lucifugus
ENSGACG00000003044	zgc:110045	99	71.512	ENSNGAG00000005416	Pcbp3	91	71.512	Nannospalax_galili
ENSGACG00000003044	zgc:110045	97	95.860	ENSNBRG00000017646	zgc:110045	72	95.860	Neolamprologus_brichardi
ENSGACG00000003044	zgc:110045	99	75.926	ENSNLEG00000002639	PCBP3	91	75.926	Nomascus_leucogenys
ENSGACG00000003044	zgc:110045	99	66.942	ENSMEUG00000012960	PCBP3	99	66.942	Notamacropus_eugenii
ENSGACG00000003044	zgc:110045	99	69.186	ENSODEG00000012873	PCBP3	91	69.186	Octodon_degus
ENSGACG00000003044	zgc:110045	97	96.178	ENSONIG00000010370	zgc:110045	76	96.178	Oreochromis_niloticus
ENSGACG00000003044	zgc:110045	73	72.374	ENSOANG00000006265	PCBP3	90	72.374	Ornithorhynchus_anatinus
ENSGACG00000003044	zgc:110045	97	94.268	ENSORLG00000014385	-	72	94.268	Oryzias_latipes
ENSGACG00000003044	zgc:110045	97	93.631	ENSORLG00020003139	zgc:110045	88	89.815	Oryzias_latipes_hni
ENSGACG00000003044	zgc:110045	97	93.949	ENSOMEG00000015459	-	72	93.949	Oryzias_melastigma
ENSGACG00000003044	zgc:110045	99	69.298	ENSOARG00000012704	PCBP3	91	69.298	Ovis_aries
ENSGACG00000003044	zgc:110045	99	75.926	ENSPPAG00000021940	PCBP3	91	75.926	Pan_paniscus
ENSGACG00000003044	zgc:110045	99	76.235	ENSPPRG00000003933	PCBP3	91	76.235	Panthera_pardus
ENSGACG00000003044	zgc:110045	99	62.691	ENSPTIG00000012038	PCBP3	90	63.272	Panthera_tigris_altaica
ENSGACG00000003044	zgc:110045	99	56.173	ENSPTRG00000014010	PCBP3	99	51.515	Pan_troglodytes
ENSGACG00000003044	zgc:110045	99	75.926	ENSPANG00000023631	PCBP3	91	75.926	Papio_anubis
ENSGACG00000003044	zgc:110045	97	77.743	ENSPMGG00000021588	-	72	77.743	Periophthalmus_magnuspinnatus
ENSGACG00000003044	zgc:110045	65	58.768	ENSPMGG00000022531	-	93	58.768	Periophthalmus_magnuspinnatus
ENSGACG00000003044	zgc:110045	99	71.512	ENSPEMG00000000587	Pcbp3	91	71.512	Peromyscus_maniculatus_bairdii
ENSGACG00000003044	zgc:110045	98	94.044	ENSPFOG00000002348	zgc:110045	98	94.044	Poecilia_formosa
ENSGACG00000003044	zgc:110045	67	90.278	ENSPLAG00000017488	zgc:110045	95	90.278	Poecilia_latipinna
ENSGACG00000003044	zgc:110045	98	90.190	ENSPMEG00000012762	zgc:110045	95	93.981	Poecilia_mexicana
ENSGACG00000003044	zgc:110045	97	94.904	ENSPREG00000001797	zgc:110045	94	95.305	Poecilia_reticulata
ENSGACG00000003044	zgc:110045	74	67.939	ENSPPYG00000011525	-	94	67.939	Pongo_abelii
ENSGACG00000003044	zgc:110045	94	58.892	ENSPCAG00000001454	PCBP3	98	58.892	Procavia_capensis
ENSGACG00000003044	zgc:110045	99	75.617	ENSPCOG00000013797	PCBP3	91	75.617	Propithecus_coquereli
ENSGACG00000003044	zgc:110045	86	70.259	ENSPVAG00000000832	PCBP3	82	70.259	Pteropus_vampyrus
ENSGACG00000003044	zgc:110045	94	90.233	ENSPNYG00000004637	zgc:110045	97	90.233	Pundamilia_nyererei
ENSGACG00000003044	zgc:110045	66	80.930	ENSPNAG00000004501	zgc:110045	96	80.930	Pygocentrus_nattereri
ENSGACG00000003044	zgc:110045	99	75.926	ENSRROG00000034567	PCBP3	91	75.926	Rhinopithecus_roxellana
ENSGACG00000003044	zgc:110045	99	75.926	ENSSBOG00000005789	PCBP3	91	75.926	Saimiri_boliviensis_boliviensis
ENSGACG00000003044	zgc:110045	97	95.860	ENSSMAG00000013541	zgc:110045	89	96.244	Scophthalmus_maximus
ENSGACG00000003044	zgc:110045	70	97.357	ENSSDUG00000019371	zgc:110045	66	97.357	Seriola_dumerili
ENSGACG00000003044	zgc:110045	97	96.497	ENSSLDG00000021064	zgc:110045	72	96.497	Seriola_lalandi_dorsalis
ENSGACG00000003044	zgc:110045	64	61.650	ENSSARG00000007629	-	100	61.650	Sorex_araneus
ENSGACG00000003044	zgc:110045	100	96.605	ENSSPAG00000000563	zgc:110045	99	96.605	Stegastes_partitus
ENSGACG00000003044	zgc:110045	99	75.926	ENSSSCG00000023041	PCBP3	91	75.926	Sus_scrofa
ENSGACG00000003044	zgc:110045	94	91.327	ENSTRUG00000017789	zgc:110045	96	91.327	Takifugu_rubripes
ENSGACG00000003044	zgc:110045	59	84.615	ENSTNIG00000003546	zgc:110045	96	84.615	Tetraodon_nigroviridis
ENSGACG00000003044	zgc:110045	73	58.403	ENSTBEG00000011882	-	73	58.403	Tupaia_belangeri
ENSGACG00000003044	zgc:110045	99	69.186	ENSUAMG00000006491	PCBP3	100	74.825	Ursus_americanus
ENSGACG00000003044	zgc:110045	99	63.401	ENSUMAG00000025403	PCBP3	91	63.401	Ursus_maritimus
ENSGACG00000003044	zgc:110045	99	67.560	ENSVVUG00000023862	PCBP3	99	63.977	Vulpes_vulpes
ENSGACG00000003044	zgc:110045	94	82.888	ENSXCOG00000005968	zgc:110045	95	82.888	Xiphophorus_couchianus
ENSGACG00000003044	zgc:110045	97	95.223	ENSXMAG00000008030	zgc:110045	73	95.223	Xiphophorus_maculatus