EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000003111 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6369 bases
Position: chrgroupVIII:858721-865089
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000004082	ResIII	PF04851.15	1.6e-08	1	1
ENSGACP00000004082	DEAD	PF00270.29	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000004096	-	2604	-	ENSGACP00000004082	760 (aa)	-	G3NFI0

Gene Model

Click here to download ENSGACG00000003111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000003111	rad54l	66	32.803	ENSGACG00000014042	chd1l	87	32.803
ENSGACG00000003111	rad54l	67	32.509	ENSGACG00000006992	ercc6l2	50	32.332
ENSGACG00000003111	rad54l	76	46.010	ENSGACG00000009128	rad54b	63	46.441

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003111	rad54l	97	79.518	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSGACG00000003111	rad54l	97	88.769	ENSAPOG00000011643	rad54l	99	88.769	Acanthochromis_polyacanthus
ENSGACG00000003111	rad54l	97	78.552	ENSAMEG00000013902	RAD54L	99	78.552	Ailuropoda_melanoleuca
ENSGACG00000003111	rad54l	98	88.140	ENSACIG00000001939	rad54l	99	88.140	Amphilophus_citrinellus
ENSGACG00000003111	rad54l	97	92.297	ENSAOCG00000017576	rad54l	100	92.297	Amphiprion_ocellaris
ENSGACG00000003111	rad54l	94	91.748	ENSAPEG00000020658	rad54l	99	91.748	Amphiprion_percula
ENSGACG00000003111	rad54l	92	93.447	ENSATEG00000006767	rad54l	99	93.447	Anabas_testudineus
ENSGACG00000003111	rad54l	92	81.624	ENSAPLG00000006389	RAD54L	99	81.624	Anas_platyrhynchos
ENSGACG00000003111	rad54l	97	80.645	ENSACAG00000002312	RAD54L	99	80.645	Anolis_carolinensis
ENSGACG00000003111	rad54l	97	79.384	ENSANAG00000035439	RAD54L	99	79.384	Aotus_nancymaae
ENSGACG00000003111	rad54l	98	87.314	ENSACLG00000018711	rad54l	100	87.314	Astatotilapia_calliptera
ENSGACG00000003111	rad54l	98	86.003	ENSAMXG00000012777	rad54l	100	86.003	Astyanax_mexicanus
ENSGACG00000003111	rad54l	97	79.412	ENSBTAG00000019901	RAD54L	99	79.412	Bos_taurus
ENSGACG00000003111	rad54l	88	58.780	WBGene00004298	rad-54	82	58.780	Caenorhabditis_elegans
ENSGACG00000003111	rad54l	94	79.889	ENSCJAG00000021080	RAD54L	91	79.889	Callithrix_jacchus
ENSGACG00000003111	rad54l	97	78.715	ENSCAFG00000004272	RAD54L	99	78.715	Canis_familiaris
ENSGACG00000003111	rad54l	97	78.686	ENSCAFG00020015066	RAD54L	99	78.686	Canis_lupus_dingo
ENSGACG00000003111	rad54l	97	79.250	ENSCHIG00000020118	RAD54L	99	79.250	Capra_hircus
ENSGACG00000003111	rad54l	97	79.144	ENSTSYG00000002032	RAD54L	99	79.144	Carlito_syrichta
ENSGACG00000003111	rad54l	97	79.786	ENSCPOG00000006768	RAD54L	99	79.786	Cavia_porcellus
ENSGACG00000003111	rad54l	97	79.920	ENSCCAG00000025783	RAD54L	99	79.920	Cebus_capucinus
ENSGACG00000003111	rad54l	97	79.384	ENSCATG00000030589	RAD54L	99	79.384	Cercocebus_atys
ENSGACG00000003111	rad54l	97	80.187	ENSCLAG00000004645	RAD54L	99	80.187	Chinchilla_lanigera
ENSGACG00000003111	rad54l	97	79.250	ENSCSAG00000001229	RAD54L	99	79.250	Chlorocebus_sabaeus
ENSGACG00000003111	rad54l	97	80.780	ENSCPBG00000005675	RAD54L	99	80.780	Chrysemys_picta_bellii
ENSGACG00000003111	rad54l	98	62.646	ENSCING00000024456	-	100	62.646	Ciona_intestinalis
ENSGACG00000003111	rad54l	98	62.141	ENSCSAVG00000010859	-	100	62.141	Ciona_savignyi
ENSGACG00000003111	rad54l	97	79.250	ENSCANG00000034891	RAD54L	99	79.250	Colobus_angolensis_palliatus
ENSGACG00000003111	rad54l	97	78.926	ENSCGRG00001014807	Rad54l	99	78.926	Cricetulus_griseus_chok1gshd
ENSGACG00000003111	rad54l	97	78.926	ENSCGRG00000016038	Rad54l	99	78.926	Cricetulus_griseus_crigri
ENSGACG00000003111	rad54l	97	88.633	ENSCSEG00000001983	rad54l	99	88.633	Cynoglossus_semilaevis
ENSGACG00000003111	rad54l	75	89.200	ENSCVAG00000019561	rad54l	99	89.200	Cyprinodon_variegatus
ENSGACG00000003111	rad54l	98	85.695	ENSDARG00000018623	rad54l	100	85.695	Danio_rerio
ENSGACG00000003111	rad54l	97	78.447	ENSDNOG00000003395	RAD54L	99	78.447	Dasypus_novemcinctus
ENSGACG00000003111	rad54l	97	72.170	ENSDORG00000002632	Rad54l	99	72.222	Dipodomys_ordii
ENSGACG00000003111	rad54l	97	53.121	FBgn0002989	okr	95	53.121	Drosophila_melanogaster
ENSGACG00000003111	rad54l	76	77.560	ENSETEG00000000550	RAD54L	78	77.560	Echinops_telfairi
ENSGACG00000003111	rad54l	97	78.686	ENSEASG00005004511	RAD54L	99	79.088	Equus_asinus_asinus
ENSGACG00000003111	rad54l	97	78.983	ENSECAG00000008760	RAD54L	99	79.384	Equus_caballus
ENSGACG00000003111	rad54l	97	75.737	ENSEEUG00000008113	RAD54L	99	75.737	Erinaceus_europaeus
ENSGACG00000003111	rad54l	98	88.322	ENSELUG00000002295	rad54l	100	88.322	Esox_lucius
ENSGACG00000003111	rad54l	97	78.313	ENSFCAG00000003444	RAD54L	99	78.313	Felis_catus
ENSGACG00000003111	rad54l	97	79.704	ENSFALG00000009480	RAD54L	99	79.704	Ficedula_albicollis
ENSGACG00000003111	rad54l	97	79.250	ENSFDAG00000007806	RAD54L	99	79.250	Fukomys_damarensis
ENSGACG00000003111	rad54l	60	85.210	ENSFHEG00000009824	rad54l	83	81.535	Fundulus_heteroclitus
ENSGACG00000003111	rad54l	97	85.270	ENSGMOG00000014568	rad54l	100	85.270	Gadus_morhua
ENSGACG00000003111	rad54l	98	79.839	ENSGALG00000010356	RAD54L	92	79.839	Gallus_gallus
ENSGACG00000003111	rad54l	89	86.963	ENSGAFG00000011110	rad54l	100	86.963	Gambusia_affinis
ENSGACG00000003111	rad54l	97	80.215	ENSGAGG00000014089	RAD54L	96	80.215	Gopherus_agassizii
ENSGACG00000003111	rad54l	97	79.384	ENSGGOG00000010602	RAD54L	99	79.384	Gorilla_gorilla
ENSGACG00000003111	rad54l	98	87.449	ENSHBUG00000007793	rad54l	100	87.449	Haplochromis_burtoni
ENSGACG00000003111	rad54l	97	79.786	ENSHGLG00000000753	RAD54L	99	79.786	Heterocephalus_glaber_female
ENSGACG00000003111	rad54l	97	79.652	ENSHGLG00100016987	RAD54L	99	79.652	Heterocephalus_glaber_male
ENSGACG00000003111	rad54l	98	84.853	ENSIPUG00000015999	rad54l	100	87.106	Ictalurus_punctatus
ENSGACG00000003111	rad54l	97	78.581	ENSSTOG00000029125	RAD54L	99	78.581	Ictidomys_tridecemlineatus
ENSGACG00000003111	rad54l	97	66.533	ENSJJAG00000000235	-	99	66.533	Jaculus_jaculus
ENSGACG00000003111	rad54l	98	87.989	ENSKMAG00000009944	rad54l	100	87.989	Kryptolebias_marmoratus
ENSGACG00000003111	rad54l	97	92.005	ENSLBEG00000014617	rad54l	99	92.005	Labrus_bergylta
ENSGACG00000003111	rad54l	99	85.395	ENSLOCG00000004144	rad54l	100	87.982	Lepisosteus_oculatus
ENSGACG00000003111	rad54l	97	78.820	ENSLAFG00000007583	RAD54L	99	79.223	Loxodonta_africana
ENSGACG00000003111	rad54l	97	79.384	ENSMFAG00000031241	RAD54L	99	79.384	Macaca_fascicularis
ENSGACG00000003111	rad54l	97	79.384	ENSMMUG00000011568	RAD54L	99	79.384	Macaca_mulatta
ENSGACG00000003111	rad54l	97	79.250	ENSMNEG00000038562	RAD54L	99	79.250	Macaca_nemestrina
ENSGACG00000003111	rad54l	97	79.384	ENSMLEG00000038145	RAD54L	99	79.384	Mandrillus_leucophaeus
ENSGACG00000003111	rad54l	97	89.445	ENSMAMG00000022180	rad54l	99	91.581	Mastacembelus_armatus
ENSGACG00000003111	rad54l	98	87.179	ENSMZEG00005018081	rad54l	100	87.179	Maylandia_zebra
ENSGACG00000003111	rad54l	97	79.784	ENSMGAG00000010634	RAD54L	99	79.784	Meleagris_gallopavo
ENSGACG00000003111	rad54l	97	79.329	ENSMAUG00000020076	Rad54l	99	79.329	Mesocricetus_auratus
ENSGACG00000003111	rad54l	97	79.786	ENSMICG00000003266	RAD54L	99	79.786	Microcebus_murinus
ENSGACG00000003111	rad54l	97	79.732	ENSMOCG00000001778	Rad54l	99	79.732	Microtus_ochrogaster
ENSGACG00000003111	rad54l	97	86.945	ENSMALG00000021148	rad54l	99	86.945	Monopterus_albus
ENSGACG00000003111	rad54l	97	74.609	MGP_CAROLIEiJ_G0026325	Rad54l	99	74.609	Mus_caroli
ENSGACG00000003111	rad54l	97	78.715	ENSMUSG00000028702	Rad54l	99	78.715	Mus_musculus
ENSGACG00000003111	rad54l	97	78.820	MGP_PahariEiJ_G0028657	Rad54l	99	78.820	Mus_pahari
ENSGACG00000003111	rad54l	97	78.715	MGP_SPRETEiJ_G0027297	Rad54l	99	78.715	Mus_spretus
ENSGACG00000003111	rad54l	97	78.983	ENSMPUG00000012883	RAD54L	99	78.983	Mustela_putorius_furo
ENSGACG00000003111	rad54l	97	79.357	ENSMLUG00000003763	RAD54L	99	79.357	Myotis_lucifugus
ENSGACG00000003111	rad54l	97	79.116	ENSNGAG00000024213	Rad54l	99	79.116	Nannospalax_galili
ENSGACG00000003111	rad54l	97	79.384	ENSNLEG00000016548	RAD54L	99	79.384	Nomascus_leucogenys
ENSGACG00000003111	rad54l	89	77.300	ENSMEUG00000006793	RAD54L	100	77.300	Notamacropus_eugenii
ENSGACG00000003111	rad54l	88	82.230	ENSOPRG00000016016	RAD54L	90	82.230	Ochotona_princeps
ENSGACG00000003111	rad54l	97	80.054	ENSODEG00000008519	RAD54L	99	80.054	Octodon_degus
ENSGACG00000003111	rad54l	98	87.179	ENSONIG00000007659	rad54l	100	87.179	Oreochromis_niloticus
ENSGACG00000003111	rad54l	97	79.250	ENSOCUG00000005229	RAD54L	99	79.250	Oryctolagus_cuniculus
ENSGACG00000003111	rad54l	98	85.155	ENSORLG00000002958	rad54l	100	85.560	Oryzias_latipes
ENSGACG00000003111	rad54l	97	85.811	ENSORLG00020006554	rad54l	99	88.954	Oryzias_latipes_hni
ENSGACG00000003111	rad54l	98	85.155	ENSORLG00015002907	rad54l	100	85.695	Oryzias_latipes_hsok
ENSGACG00000003111	rad54l	97	85.811	ENSOMEG00000007770	rad54l	99	85.811	Oryzias_melastigma
ENSGACG00000003111	rad54l	97	79.306	ENSOARG00000002264	RAD54L	99	79.306	Ovis_aries
ENSGACG00000003111	rad54l	97	79.384	ENSPPAG00000031222	RAD54L	99	79.384	Pan_paniscus
ENSGACG00000003111	rad54l	97	78.046	ENSPPRG00000010317	RAD54L	99	78.046	Panthera_pardus
ENSGACG00000003111	rad54l	97	78.046	ENSPTIG00000012200	RAD54L	99	78.046	Panthera_tigris_altaica
ENSGACG00000003111	rad54l	97	79.384	ENSPTRG00000000689	RAD54L	99	79.384	Pan_troglodytes
ENSGACG00000003111	rad54l	97	79.384	ENSPANG00000016295	RAD54L	99	79.384	Papio_anubis
ENSGACG00000003111	rad54l	97	77.943	ENSPKIG00000016172	rad54l	99	77.943	Paramormyrops_kingsleyae
ENSGACG00000003111	rad54l	96	80.952	ENSPSIG00000003258	RAD54L	99	80.952	Pelodiscus_sinensis
ENSGACG00000003111	rad54l	97	80.946	ENSPMGG00000016335	rad54l	99	80.946	Periophthalmus_magnuspinnatus
ENSGACG00000003111	rad54l	97	79.463	ENSPEMG00000011422	Rad54l	99	79.463	Peromyscus_maniculatus_bairdii
ENSGACG00000003111	rad54l	97	69.664	ENSPMAG00000007719	rad54l	99	69.664	Petromyzon_marinus
ENSGACG00000003111	rad54l	98	78.389	ENSPCIG00000029032	RAD54L	100	78.389	Phascolarctos_cinereus
ENSGACG00000003111	rad54l	84	89.623	ENSPFOG00000013732	rad54l	99	89.623	Poecilia_formosa
ENSGACG00000003111	rad54l	80	87.175	ENSPLAG00000023416	rad54l	99	87.175	Poecilia_latipinna
ENSGACG00000003111	rad54l	89	87.407	ENSPMEG00000008299	rad54l	100	87.407	Poecilia_mexicana
ENSGACG00000003111	rad54l	98	86.505	ENSPREG00000019955	rad54l	100	86.505	Poecilia_reticulata
ENSGACG00000003111	rad54l	97	67.647	ENSPPYG00000001398	RAD54L	99	67.647	Pongo_abelii
ENSGACG00000003111	rad54l	78	81.068	ENSPCAG00000005323	RAD54L	80	81.068	Procavia_capensis
ENSGACG00000003111	rad54l	97	79.250	ENSPCOG00000015423	RAD54L	99	79.250	Propithecus_coquereli
ENSGACG00000003111	rad54l	98	82.095	ENSPNYG00000002942	rad54l	99	82.095	Pundamilia_nyererei
ENSGACG00000003111	rad54l	98	85.984	ENSPNAG00000012483	rad54l	100	85.984	Pygocentrus_nattereri
ENSGACG00000003111	rad54l	97	78.715	ENSRNOG00000013148	Rad54l	99	78.715	Rattus_norvegicus
ENSGACG00000003111	rad54l	97	79.250	ENSRBIG00000043495	RAD54L	99	79.250	Rhinopithecus_bieti
ENSGACG00000003111	rad54l	97	79.384	ENSRROG00000020844	RAD54L	99	79.384	Rhinopithecus_roxellana
ENSGACG00000003111	rad54l	79	49.922	YGL163C	RAD54	71	49.922	Saccharomyces_cerevisiae
ENSGACG00000003111	rad54l	97	79.786	ENSSBOG00000024672	RAD54L	99	79.786	Saimiri_boliviensis_boliviensis
ENSGACG00000003111	rad54l	98	78.983	ENSSHAG00000000110	RAD54L	100	78.983	Sarcophilus_harrisii
ENSGACG00000003111	rad54l	98	91.768	ENSSDUG00000019147	rad54l	100	91.768	Seriola_dumerili
ENSGACG00000003111	rad54l	98	91.498	ENSSLDG00000012330	rad54l	100	91.498	Seriola_lalandi_dorsalis
ENSGACG00000003111	rad54l	82	78.170	ENSSARG00000006689	RAD54L	100	78.170	Sorex_araneus
ENSGACG00000003111	rad54l	97	90.270	ENSSPAG00000011016	rad54l	100	90.270	Stegastes_partitus
ENSGACG00000003111	rad54l	97	79.518	ENSSSCG00000003905	RAD54L	99	79.518	Sus_scrofa
ENSGACG00000003111	rad54l	97	79.570	ENSTGUG00000008233	RAD54L	99	79.732	Taeniopygia_guttata
ENSGACG00000003111	rad54l	97	84.345	ENSTRUG00000008410	rad54l	99	84.345	Takifugu_rubripes
ENSGACG00000003111	rad54l	97	82.321	ENSTNIG00000004716	rad54l	99	82.726	Tetraodon_nigroviridis
ENSGACG00000003111	rad54l	97	73.861	ENSTTRG00000006315	RAD54L	99	73.861	Tursiops_truncatus
ENSGACG00000003111	rad54l	97	78.437	ENSUAMG00000011824	RAD54L	99	78.437	Ursus_americanus
ENSGACG00000003111	rad54l	97	77.358	ENSUMAG00000023603	RAD54L	99	77.358	Ursus_maritimus
ENSGACG00000003111	rad54l	97	78.715	ENSVVUG00000007201	RAD54L	99	78.715	Vulpes_vulpes
ENSGACG00000003111	rad54l	94	75.000	ENSXETG00000004369	rad54l	99	75.000	Xenopus_tropicalis
ENSGACG00000003111	rad54l	54	84.352	ENSXCOG00000016028	rad54l	89	80.471	Xiphophorus_couchianus