EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000003262 (Gene tree)
Gene ID: -
Gene Symbol: snrpb
Alias: zgc:77315
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3183 bases
Position: chrgroupXVII:491323-494505
Accession: ZDB-GENE-040426-1819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000004291	LSM	PF01423.22	5.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000004305	-	1222	-	ENSGACP00000004291	238 (aa)	-	G3NG36

Gene Model

Click here to download ENSGACG00000003262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003262	snrpb	70	94.643	ENSG00000125835	SNRPB	74	98.077	Homo_sapiens
ENSGACG00000003262	snrpb	100	98.333	ENSAPOG00000019606	snrpb	82	98.333	Acanthochromis_polyacanthus
ENSGACG00000003262	snrpb	69	94.611	ENSAMEG00000011353	SNRPB	75	91.209	Ailuropoda_melanoleuca
ENSGACG00000003262	snrpb	92	98.198	ENSACIG00000014480	snrpb	99	98.198	Amphilophus_citrinellus
ENSGACG00000003262	snrpb	100	97.917	ENSAOCG00000006876	snrpb	100	97.917	Amphiprion_ocellaris
ENSGACG00000003262	snrpb	100	97.917	ENSAPEG00000021585	snrpb	100	97.917	Amphiprion_percula
ENSGACG00000003262	snrpb	100	97.500	ENSATEG00000009836	snrpb	100	97.500	Anabas_testudineus
ENSGACG00000003262	snrpb	66	95.625	ENSACAG00000002053	SNRPB	75	91.954	Anolis_carolinensis
ENSGACG00000003262	snrpb	96	85.281	ENSANAG00000036271	-	74	83.607	Aotus_nancymaae
ENSGACG00000003262	snrpb	70	94.643	ENSANAG00000024443	-	79	91.257	Aotus_nancymaae
ENSGACG00000003262	snrpb	100	98.333	ENSACLG00000014707	snrpb	100	98.333	Astatotilapia_calliptera
ENSGACG00000003262	snrpb	99	97.881	ENSAMXG00000029434	snrpb	99	97.881	Astyanax_mexicanus
ENSGACG00000003262	snrpb	91	80.995	ENSBTAG00000001038	SNRPB	79	91.257	Bos_taurus
ENSGACG00000003262	snrpb	89	84.112	ENSCJAG00000023097	-	76	84.153	Callithrix_jacchus
ENSGACG00000003262	snrpb	70	94.643	ENSCJAG00000020971	-	79	91.257	Callithrix_jacchus
ENSGACG00000003262	snrpb	61	84.247	ENSCAFG00000031109	-	76	79.781	Canis_familiaris
ENSGACG00000003262	snrpb	70	94.643	ENSCAFG00000006693	-	79	91.257	Canis_familiaris
ENSGACG00000003262	snrpb	70	94.643	ENSCAFG00020016981	-	76	91.257	Canis_lupus_dingo
ENSGACG00000003262	snrpb	70	94.643	ENSCHIG00000025449	-	79	91.257	Capra_hircus
ENSGACG00000003262	snrpb	70	94.643	ENSTSYG00000014498	-	79	91.257	Carlito_syrichta
ENSGACG00000003262	snrpb	96	73.913	ENSTSYG00000032303	-	66	72.376	Carlito_syrichta
ENSGACG00000003262	snrpb	69	94.611	ENSCAPG00000012669	SNRPB	79	91.209	Cavia_aperea
ENSGACG00000003262	snrpb	70	94.643	ENSCPOG00000039408	SNRPB	79	91.257	Cavia_porcellus
ENSGACG00000003262	snrpb	70	94.643	ENSCCAG00000026002	SNRPB	79	91.257	Cebus_capucinus
ENSGACG00000003262	snrpb	53	83.465	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSGACG00000003262	snrpb	70	94.643	ENSCATG00000030230	SNRPB	79	91.257	Cercocebus_atys
ENSGACG00000003262	snrpb	70	94.643	ENSCLAG00000012442	SNRPB	77	91.257	Chinchilla_lanigera
ENSGACG00000003262	snrpb	70	94.643	ENSCSAG00000010840	SNRPB	79	91.257	Chlorocebus_sabaeus
ENSGACG00000003262	snrpb	70	96.429	ENSCPBG00000026801	SNRPB	80	92.896	Chrysemys_picta_bellii
ENSGACG00000003262	snrpb	70	94.643	ENSCANG00000019461	SNRPB	79	91.257	Colobus_angolensis_palliatus
ENSGACG00000003262	snrpb	70	94.643	ENSCGRG00001023046	Snrpb	79	91.257	Cricetulus_griseus_chok1gshd
ENSGACG00000003262	snrpb	68	94.479	ENSCGRG00000010423	Snrpb	78	90.857	Cricetulus_griseus_crigri
ENSGACG00000003262	snrpb	100	98.319	ENSCSEG00000020328	snrpb	100	98.319	Cynoglossus_semilaevis
ENSGACG00000003262	snrpb	100	97.071	ENSDARG00000011125	snrpb	100	97.071	Danio_rerio
ENSGACG00000003262	snrpb	70	88.690	ENSDNOG00000007896	-	75	85.246	Dasypus_novemcinctus
ENSGACG00000003262	snrpb	70	94.643	ENSDNOG00000015545	-	76	91.257	Dasypus_novemcinctus
ENSGACG00000003262	snrpb	67	94.444	ENSDORG00000029558	Snrpb	77	90.960	Dipodomys_ordii
ENSGACG00000003262	snrpb	66	67.516	FBgn0262601	SmB	74	69.128	Drosophila_melanogaster
ENSGACG00000003262	snrpb	70	73.810	ENSETEG00000006830	SNRPB	80	71.585	Echinops_telfairi
ENSGACG00000003262	snrpb	77	79.781	ENSEBUG00000007467	SNRPB	70	79.888	Eptatretus_burgeri
ENSGACG00000003262	snrpb	70	94.048	ENSEASG00005012991	SNRPB	79	90.710	Equus_asinus_asinus
ENSGACG00000003262	snrpb	70	94.643	ENSECAG00000011944	SNRPB	79	91.257	Equus_caballus
ENSGACG00000003262	snrpb	70	94.643	ENSEEUG00000015568	SNRPB	64	91.257	Erinaceus_europaeus
ENSGACG00000003262	snrpb	99	97.872	ENSELUG00000014564	snrpb	99	97.872	Esox_lucius
ENSGACG00000003262	snrpb	70	94.643	ENSFCAG00000034090	-	79	91.257	Felis_catus
ENSGACG00000003262	snrpb	66	96.250	ENSFALG00000004866	SNRPB	75	92.000	Ficedula_albicollis
ENSGACG00000003262	snrpb	70	94.643	ENSFDAG00000009937	SNRPB	79	91.257	Fukomys_damarensis
ENSGACG00000003262	snrpb	70	96.429	ENSGALG00000035421	SNRPN	76	92.350	Gallus_gallus
ENSGACG00000003262	snrpb	94	96.460	ENSGAFG00000019558	snrpb	99	96.460	Gambusia_affinis
ENSGACG00000003262	snrpb	70	96.429	ENSGAGG00000001308	SNRPB	76	92.896	Gopherus_agassizii
ENSGACG00000003262	snrpb	70	94.643	ENSGGOG00000016138	SNRPB	79	91.257	Gorilla_gorilla
ENSGACG00000003262	snrpb	100	98.333	ENSHBUG00000008369	snrpb	100	98.333	Haplochromis_burtoni
ENSGACG00000003262	snrpb	63	86.000	ENSHGLG00000016505	-	86	80.000	Heterocephalus_glaber_female
ENSGACG00000003262	snrpb	70	94.643	ENSHGLG00000016241	-	79	91.257	Heterocephalus_glaber_female
ENSGACG00000003262	snrpb	63	86.000	ENSHGLG00100004178	-	86	80.000	Heterocephalus_glaber_male
ENSGACG00000003262	snrpb	70	94.643	ENSHGLG00100012877	-	79	91.257	Heterocephalus_glaber_male
ENSGACG00000003262	snrpb	100	98.739	ENSHCOG00000014888	snrpb	100	98.739	Hippocampus_comes
ENSGACG00000003262	snrpb	99	97.458	ENSIPUG00000024569	SNRPB	99	97.458	Ictalurus_punctatus
ENSGACG00000003262	snrpb	70	92.857	ENSSTOG00000033664	-	76	89.617	Ictidomys_tridecemlineatus
ENSGACG00000003262	snrpb	89	78.404	ENSSTOG00000027821	-	62	94.853	Ictidomys_tridecemlineatus
ENSGACG00000003262	snrpb	70	94.643	ENSJJAG00000024170	Snrpb	79	91.257	Jaculus_jaculus
ENSGACG00000003262	snrpb	95	96.930	ENSKMAG00000014494	snrpb	93	96.930	Kryptolebias_marmoratus
ENSGACG00000003262	snrpb	100	99.160	ENSLBEG00000005678	snrpb	100	99.160	Labrus_bergylta
ENSGACG00000003262	snrpb	99	94.958	ENSLACG00000011459	SNRPB	99	94.958	Latimeria_chalumnae
ENSGACG00000003262	snrpb	99	97.881	ENSLOCG00000002687	snrpb	99	97.881	Lepisosteus_oculatus
ENSGACG00000003262	snrpb	69	90.419	ENSLAFG00000017588	SNRPB	78	87.363	Loxodonta_africana
ENSGACG00000003262	snrpb	70	94.643	ENSMFAG00000038756	SNRPB	79	91.257	Macaca_fascicularis
ENSGACG00000003262	snrpb	70	94.643	ENSMMUG00000010050	SNRPB	79	91.257	Macaca_mulatta
ENSGACG00000003262	snrpb	70	94.643	ENSMNEG00000027954	SNRPB	79	91.257	Macaca_nemestrina
ENSGACG00000003262	snrpb	70	94.643	ENSMLEG00000022346	SNRPB	79	91.257	Mandrillus_leucophaeus
ENSGACG00000003262	snrpb	99	98.326	ENSMAMG00000009294	snrpb	97	98.326	Mastacembelus_armatus
ENSGACG00000003262	snrpb	100	98.333	ENSMZEG00005011856	snrpb	100	98.333	Maylandia_zebra
ENSGACG00000003262	snrpb	75	82.873	ENSMICG00000015983	-	84	81.421	Microcebus_murinus
ENSGACG00000003262	snrpb	70	94.643	ENSMICG00000016519	SNRPB	79	91.257	Microcebus_murinus
ENSGACG00000003262	snrpb	58	78.417	ENSMOCG00000021362	-	76	74.033	Microtus_ochrogaster
ENSGACG00000003262	snrpb	70	94.048	ENSMOCG00000002892	-	79	90.710	Microtus_ochrogaster
ENSGACG00000003262	snrpb	95	99.111	ENSMMOG00000013226	snrpb	97	99.111	Mola_mola
ENSGACG00000003262	snrpb	100	97.500	ENSMALG00000020839	snrpb	81	97.500	Monopterus_albus
ENSGACG00000003262	snrpb	70	94.643	MGP_CAROLIEiJ_G0024293	Snrpb	74	98.077	Mus_caroli
ENSGACG00000003262	snrpb	70	94.643	ENSMUSG00000027404	Snrpb	74	98.077	Mus_musculus
ENSGACG00000003262	snrpb	70	94.643	MGP_PahariEiJ_G0025738	Snrpb	74	98.077	Mus_pahari
ENSGACG00000003262	snrpb	70	94.643	MGP_SPRETEiJ_G0025213	Snrpb	73	98.077	Mus_spretus
ENSGACG00000003262	snrpb	70	94.643	ENSMPUG00000009283	SNRPB	79	91.257	Mustela_putorius_furo
ENSGACG00000003262	snrpb	70	91.071	ENSMLUG00000016951	SNRPB	76	87.978	Myotis_lucifugus
ENSGACG00000003262	snrpb	70	94.643	ENSNGAG00000012051	Snrpb	79	91.257	Nannospalax_galili
ENSGACG00000003262	snrpb	95	96.053	ENSNBRG00000006353	snrpb	87	96.053	Neolamprologus_brichardi
ENSGACG00000003262	snrpb	70	94.643	ENSNLEG00000029067	SNRPB	77	91.209	Nomascus_leucogenys
ENSGACG00000003262	snrpb	69	94.611	ENSMEUG00000015625	SNRPB	81	91.209	Notamacropus_eugenii
ENSGACG00000003262	snrpb	70	94.643	ENSODEG00000004305	-	79	91.257	Octodon_degus
ENSGACG00000003262	snrpb	70	89.286	ENSODEG00000016060	-	77	86.339	Octodon_degus
ENSGACG00000003262	snrpb	100	98.333	ENSONIG00000000248	snrpb	100	98.333	Oreochromis_niloticus
ENSGACG00000003262	snrpb	89	87.442	ENSOCUG00000021456	-	76	86.885	Oryctolagus_cuniculus
ENSGACG00000003262	snrpb	88	89.202	ENSOCUG00000028215	-	76	89.071	Oryctolagus_cuniculus
ENSGACG00000003262	snrpb	70	94.643	ENSOCUG00000014042	-	76	91.257	Oryctolagus_cuniculus
ENSGACG00000003262	snrpb	88	64.623	ENSOCUG00000026813	-	63	66.892	Oryctolagus_cuniculus
ENSGACG00000003262	snrpb	74	88.268	ENSOCUG00000022423	-	92	86.034	Oryctolagus_cuniculus
ENSGACG00000003262	snrpb	100	97.500	ENSORLG00000021862	snrpb	100	97.500	Oryzias_latipes
ENSGACG00000003262	snrpb	70	94.643	ENSOGAG00000016149	SNRPB	76	91.257	Otolemur_garnettii
ENSGACG00000003262	snrpb	70	94.643	ENSOARG00000006740	SNRPB	79	91.257	Ovis_aries
ENSGACG00000003262	snrpb	70	94.643	ENSPPAG00000036314	SNRPB	79	91.257	Pan_paniscus
ENSGACG00000003262	snrpb	70	94.643	ENSPPRG00000003233	-	79	91.257	Panthera_pardus
ENSGACG00000003262	snrpb	69	94.611	ENSPTIG00000007468	SNRPB	79	91.209	Panthera_tigris_altaica
ENSGACG00000003262	snrpb	70	94.643	ENSPTRG00000013176	SNRPB	79	91.257	Pan_troglodytes
ENSGACG00000003262	snrpb	70	94.643	ENSPANG00000020362	SNRPB	76	91.257	Papio_anubis
ENSGACG00000003262	snrpb	99	96.610	ENSPKIG00000002865	snrpb	99	96.610	Paramormyrops_kingsleyae
ENSGACG00000003262	snrpb	69	96.407	ENSPSIG00000014125	SNRPB	75	92.857	Pelodiscus_sinensis
ENSGACG00000003262	snrpb	74	96.571	ENSPMGG00000016349	snrpb	75	96.571	Periophthalmus_magnuspinnatus
ENSGACG00000003262	snrpb	70	94.643	ENSPEMG00000007948	Snrpb	79	91.257	Peromyscus_maniculatus_bairdii
ENSGACG00000003262	snrpb	69	94.012	ENSPCIG00000004694	SNRPB	76	90.659	Phascolarctos_cinereus
ENSGACG00000003262	snrpb	63	100.000	ENSPFOG00000011802	snrpb	63	100.000	Poecilia_formosa
ENSGACG00000003262	snrpb	57	100.000	ENSPREG00000015515	snrpb	62	100.000	Poecilia_reticulata
ENSGACG00000003262	snrpb	70	94.643	ENSPPYG00000010841	SNRPB	79	91.257	Pongo_abelii
ENSGACG00000003262	snrpb	70	94.643	ENSPCOG00000013686	SNRPB	79	91.257	Propithecus_coquereli
ENSGACG00000003262	snrpb	70	93.452	ENSPVAG00000017013	SNRPB	64	89.617	Pteropus_vampyrus
ENSGACG00000003262	snrpb	100	98.333	ENSPNYG00000014788	snrpb	100	98.333	Pundamilia_nyererei
ENSGACG00000003262	snrpb	99	97.458	ENSPNAG00000016126	snrpb	99	97.458	Pygocentrus_nattereri
ENSGACG00000003262	snrpb	70	94.643	ENSRNOG00000006961	Snrpb	73	98.077	Rattus_norvegicus
ENSGACG00000003262	snrpb	70	94.643	ENSRBIG00000040505	SNRPB	79	91.758	Rhinopithecus_bieti
ENSGACG00000003262	snrpb	70	94.643	ENSRROG00000036094	SNRPB	79	91.257	Rhinopithecus_roxellana
ENSGACG00000003262	snrpb	70	94.643	ENSSBOG00000027310	SNRPB	79	91.257	Saimiri_boliviensis_boliviensis
ENSGACG00000003262	snrpb	70	95.238	ENSSHAG00000010394	SNRPB	76	91.803	Sarcophilus_harrisii
ENSGACG00000003262	snrpb	99	96.186	ENSSFOG00015002870	snrpb	99	96.186	Scleropages_formosus
ENSGACG00000003262	snrpb	100	98.739	ENSSMAG00000006766	snrpb	100	98.739	Scophthalmus_maximus
ENSGACG00000003262	snrpb	100	98.333	ENSSDUG00000018539	snrpb	100	98.333	Seriola_dumerili
ENSGACG00000003262	snrpb	100	98.333	ENSSLDG00000022391	snrpb	100	98.333	Seriola_lalandi_dorsalis
ENSGACG00000003262	snrpb	69	79.042	ENSSARG00000003084	SNRPB	78	76.923	Sorex_araneus
ENSGACG00000003262	snrpb	69	96.407	ENSSPUG00000015659	SNRPB	76	92.857	Sphenodon_punctatus
ENSGACG00000003262	snrpb	100	98.333	ENSSPAG00000021992	snrpb	100	98.333	Stegastes_partitus
ENSGACG00000003262	snrpb	70	94.643	ENSSSCG00000040857	-	79	91.257	Sus_scrofa
ENSGACG00000003262	snrpb	95	72.489	ENSSSCG00000011966	-	77	68.306	Sus_scrofa
ENSGACG00000003262	snrpb	71	83.529	ENSTGUG00000005684	SNRPB	59	97.143	Taeniopygia_guttata
ENSGACG00000003262	snrpb	95	98.673	ENSTRUG00000023094	snrpb	99	98.673	Takifugu_rubripes
ENSGACG00000003262	snrpb	100	98.739	ENSTNIG00000002991	snrpb	100	98.739	Tetraodon_nigroviridis
ENSGACG00000003262	snrpb	70	94.643	ENSUAMG00000005984	-	88	90.710	Ursus_americanus
ENSGACG00000003262	snrpb	70	94.048	ENSVVUG00000025654	-	76	90.710	Vulpes_vulpes
ENSGACG00000003262	snrpb	93	74.449	ENSVVUG00000010086	-	78	73.626	Vulpes_vulpes
ENSGACG00000003262	snrpb	63	98.000	ENSXETG00000027266	snrpb	77	91.803	Xenopus_tropicalis
ENSGACG00000003262	snrpb	61	95.139	ENSXMAG00000028767	snrpb	58	100.000	Xiphophorus_maculatus