EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000003499 (Gene tree)
Gene ID: -
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 11307 bases
Position: chrgroupXX:857536-868842
Accession: ZDB-GENE-120911-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000004585	POP1	PF06978.11	1.6e-36	1	2
ENSGACP00000004585	POP1	PF06978.11	1.6e-36	2	2
ENSGACP00000004585	POPLD	PF08170.12	1.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000004599	-	3096	-	ENSGACP00000004585	1031 (aa)	-	G3NGX8

Gene Model

Click here to download ENSGACG00000003499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003499's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003499	pop1	100	46.578	ENSG00000104356	POP1	100	46.958	Homo_sapiens
ENSGACG00000003499	pop1	100	68.566	ENSAPOG00000008198	pop1	100	68.566	Acanthochromis_polyacanthus
ENSGACG00000003499	pop1	100	45.905	ENSAMEG00000000556	POP1	100	45.964	Ailuropoda_melanoleuca
ENSGACG00000003499	pop1	100	64.504	ENSACIG00000004169	POP1	100	63.429	Amphilophus_citrinellus
ENSGACG00000003499	pop1	100	68.091	ENSAOCG00000010991	pop1	100	68.281	Amphiprion_ocellaris
ENSGACG00000003499	pop1	100	62.582	ENSAPEG00000007607	pop1	100	62.488	Amphiprion_percula
ENSGACG00000003499	pop1	100	67.672	ENSATEG00000024814	POP1	100	68.049	Anabas_testudineus
ENSGACG00000003499	pop1	92	47.580	ENSAPLG00000014418	POP1	99	47.683	Anas_platyrhynchos
ENSGACG00000003499	pop1	100	44.677	ENSACAG00000016083	POP1	100	44.677	Anolis_carolinensis
ENSGACG00000003499	pop1	87	51.734	ENSANAG00000026360	POP1	99	51.734	Aotus_nancymaae
ENSGACG00000003499	pop1	92	77.080	ENSACLG00000010951	pop1	100	67.782	Astatotilapia_calliptera
ENSGACG00000003499	pop1	93	61.096	ENSAMXG00000014483	POP1	98	60.829	Astyanax_mexicanus
ENSGACG00000003499	pop1	100	46.743	ENSBTAG00000012596	POP1	100	46.935	Bos_taurus
ENSGACG00000003499	pop1	100	46.000	ENSCJAG00000015567	POP1	100	46.095	Callithrix_jacchus
ENSGACG00000003499	pop1	100	45.977	ENSCAFG00000000469	POP1	100	45.881	Canis_familiaris
ENSGACG00000003499	pop1	100	46.190	ENSCAFG00020026765	POP1	100	45.985	Canis_lupus_dingo
ENSGACG00000003499	pop1	100	46.367	ENSCHIG00000017066	POP1	100	46.558	Capra_hircus
ENSGACG00000003499	pop1	100	46.425	ENSTSYG00000003097	POP1	100	46.425	Carlito_syrichta
ENSGACG00000003499	pop1	100	45.611	ENSCAPG00000007251	POP1	100	45.611	Cavia_aperea
ENSGACG00000003499	pop1	100	46.851	ENSCPOG00000002901	POP1	100	46.851	Cavia_porcellus
ENSGACG00000003499	pop1	100	46.293	ENSCCAG00000018939	POP1	100	46.388	Cebus_capucinus
ENSGACG00000003499	pop1	100	46.425	ENSCATG00000040916	POP1	100	46.425	Cercocebus_atys
ENSGACG00000003499	pop1	100	46.300	ENSCLAG00000007208	POP1	97	46.490	Chinchilla_lanigera
ENSGACG00000003499	pop1	90	48.568	ENSCSAG00000012340	POP1	98	48.391	Chlorocebus_sabaeus
ENSGACG00000003499	pop1	92	45.691	ENSCHOG00000011432	POP1	96	45.691	Choloepus_hoffmanni
ENSGACG00000003499	pop1	100	46.227	ENSCPBG00000006373	POP1	100	46.418	Chrysemys_picta_bellii
ENSGACG00000003499	pop1	82	33.721	ENSCING00000008323	-	88	34.118	Ciona_intestinalis
ENSGACG00000003499	pop1	100	46.139	ENSCANG00000001647	POP1	100	46.139	Colobus_angolensis_palliatus
ENSGACG00000003499	pop1	100	44.785	ENSCGRG00001017308	Pop1	100	44.785	Cricetulus_griseus_chok1gshd
ENSGACG00000003499	pop1	100	41.675	ENSCGRG00000010824	Pop1	100	41.675	Cricetulus_griseus_crigri
ENSGACG00000003499	pop1	100	64.577	ENSCSEG00000008737	POP1	100	64.695	Cynoglossus_semilaevis
ENSGACG00000003499	pop1	100	62.808	ENSCVAG00000022248	pop1	100	62.998	Cyprinodon_variegatus
ENSGACG00000003499	pop1	52	51.685	ENSDARG00000102087	pop1	98	51.498	Danio_rerio
ENSGACG00000003499	pop1	100	43.216	ENSDNOG00000019974	POP1	100	43.216	Dasypus_novemcinctus
ENSGACG00000003499	pop1	100	39.617	ENSDORG00000015384	Pop1	100	39.733	Dipodomys_ordii
ENSGACG00000003499	pop1	62	31.269	FBgn0026702	l(1)G0045	74	30.825	Drosophila_melanogaster
ENSGACG00000003499	pop1	89	44.915	ENSETEG00000007839	POP1	88	44.407	Echinops_telfairi
ENSGACG00000003499	pop1	100	45.793	ENSEASG00005003189	POP1	98	45.889	Equus_asinus_asinus
ENSGACG00000003499	pop1	100	45.837	ENSECAG00000024236	POP1	100	46.029	Equus_caballus
ENSGACG00000003499	pop1	51	70.130	ENSEEUG00000003050	-	53	75.758	Erinaceus_europaeus
ENSGACG00000003499	pop1	100	58.565	ENSELUG00000003526	pop1	100	58.756	Esox_lucius
ENSGACG00000003499	pop1	100	46.227	ENSFCAG00000002168	POP1	100	46.500	Felis_catus
ENSGACG00000003499	pop1	100	43.918	ENSFALG00000005711	POP1	100	45.118	Ficedula_albicollis
ENSGACG00000003499	pop1	100	45.949	ENSFDAG00000017068	POP1	100	46.044	Fukomys_damarensis
ENSGACG00000003499	pop1	100	64.107	ENSFHEG00000019518	pop1	100	64.107	Fundulus_heteroclitus
ENSGACG00000003499	pop1	95	60.887	ENSGMOG00000000659	POP1	100	59.273	Gadus_morhua
ENSGACG00000003499	pop1	91	70.907	ENSGAFG00000019770	POP1	100	64.327	Gambusia_affinis
ENSGACG00000003499	pop1	100	45.498	ENSGAGG00000011737	POP1	98	45.841	Gopherus_agassizii
ENSGACG00000003499	pop1	100	46.863	ENSGGOG00000003176	POP1	100	46.863	Gorilla_gorilla
ENSGACG00000003499	pop1	100	67.495	ENSHBUG00000021583	pop1	100	67.495	Haplochromis_burtoni
ENSGACG00000003499	pop1	100	46.425	ENSHGLG00000006029	POP1	100	46.520	Heterocephalus_glaber_female
ENSGACG00000003499	pop1	100	46.425	ENSHGLG00100016879	POP1	100	46.520	Heterocephalus_glaber_male
ENSGACG00000003499	pop1	90	64.051	ENSHCOG00000013888	pop1	100	59.885	Hippocampus_comes
ENSGACG00000003499	pop1	100	52.206	ENSIPUG00000018336	pop1	100	51.930	Ictalurus_punctatus
ENSGACG00000003499	pop1	100	45.881	ENSSTOG00000011455	POP1	97	45.881	Ictidomys_tridecemlineatus
ENSGACG00000003499	pop1	100	43.090	ENSJJAG00000013325	Pop1	100	43.378	Jaculus_jaculus
ENSGACG00000003499	pop1	100	67.118	ENSKMAG00000001346	POP1	100	67.215	Kryptolebias_marmoratus
ENSGACG00000003499	pop1	89	66.702	ENSLBEG00000024457	POP1	93	66.381	Labrus_bergylta
ENSGACG00000003499	pop1	91	48.410	ENSLACG00000012498	POP1	97	48.825	Latimeria_chalumnae
ENSGACG00000003499	pop1	100	53.102	ENSLOCG00000009817	POP1	100	53.745	Lepisosteus_oculatus
ENSGACG00000003499	pop1	100	46.328	ENSLAFG00000010770	POP1	100	46.422	Loxodonta_africana
ENSGACG00000003499	pop1	100	46.330	ENSMFAG00000000347	POP1	100	46.330	Macaca_fascicularis
ENSGACG00000003499	pop1	100	46.616	ENSMNEG00000036870	POP1	100	46.616	Macaca_nemestrina
ENSGACG00000003499	pop1	100	46.425	ENSMLEG00000034986	POP1	100	46.425	Mandrillus_leucophaeus
ENSGACG00000003499	pop1	100	68.762	ENSMAMG00000004040	pop1	100	68.571	Mastacembelus_armatus
ENSGACG00000003499	pop1	100	67.782	ENSMZEG00005025448	pop1	100	67.782	Maylandia_zebra
ENSGACG00000003499	pop1	100	44.506	ENSMGAG00000012167	POP1	100	45.125	Meleagris_gallopavo
ENSGACG00000003499	pop1	100	44.317	ENSMAUG00000017537	Pop1	100	44.317	Mesocricetus_auratus
ENSGACG00000003499	pop1	100	45.671	ENSMICG00000004361	POP1	100	45.671	Microcebus_murinus
ENSGACG00000003499	pop1	100	44.861	ENSMOCG00000006356	Pop1	100	45.594	Microtus_ochrogaster
ENSGACG00000003499	pop1	100	61.868	ENSMMOG00000018242	pop1	100	61.964	Mola_mola
ENSGACG00000003499	pop1	100	45.283	ENSMODG00000006561	POP1	100	45.377	Monodelphis_domestica
ENSGACG00000003499	pop1	100	67.686	ENSMALG00000012621	POP1	100	67.431	Monopterus_albus
ENSGACG00000003499	pop1	100	43.846	MGP_CAROLIEiJ_G0019726	Pop1	100	43.846	Mus_caroli
ENSGACG00000003499	pop1	100	43.846	ENSMUSG00000022325	Pop1	100	43.846	Mus_musculus
ENSGACG00000003499	pop1	100	44.380	MGP_PahariEiJ_G0019735	Pop1	100	44.380	Mus_pahari
ENSGACG00000003499	pop1	100	43.828	MGP_SPRETEiJ_G0020622	Pop1	100	43.828	Mus_spretus
ENSGACG00000003499	pop1	100	46.279	ENSMPUG00000015250	POP1	100	46.279	Mustela_putorius_furo
ENSGACG00000003499	pop1	100	44.687	ENSMLUG00000010204	POP1	100	44.834	Myotis_lucifugus
ENSGACG00000003499	pop1	100	44.943	ENSNGAG00000001582	Pop1	100	44.752	Nannospalax_galili
ENSGACG00000003499	pop1	92	83.333	ENSNBRG00000002356	pop1	100	61.201	Neolamprologus_brichardi
ENSGACG00000003499	pop1	100	46.565	ENSNLEG00000002541	POP1	100	46.565	Nomascus_leucogenys
ENSGACG00000003499	pop1	75	54.190	ENSMEUG00000003118	POP1	91	54.190	Notamacropus_eugenii
ENSGACG00000003499	pop1	100	45.220	ENSOPRG00000007667	POP1	100	45.220	Ochotona_princeps
ENSGACG00000003499	pop1	100	46.863	ENSODEG00000003984	POP1	100	46.958	Octodon_degus
ENSGACG00000003499	pop1	100	68.715	ENSONIG00000016445	pop1	100	68.715	Oreochromis_niloticus
ENSGACG00000003499	pop1	59	46.016	ENSOANG00000001278	-	94	46.016	Ornithorhynchus_anatinus
ENSGACG00000003499	pop1	100	44.939	ENSOCUG00000017400	POP1	100	45.033	Oryctolagus_cuniculus
ENSGACG00000003499	pop1	100	63.785	ENSORLG00000002839	pop1	100	64.169	Oryzias_latipes
ENSGACG00000003499	pop1	91	64.181	ENSORLG00020022450	POP1	95	64.354	Oryzias_latipes_hni
ENSGACG00000003499	pop1	100	64.176	ENSORLG00015012746	POP1	100	64.491	Oryzias_latipes_hsok
ENSGACG00000003499	pop1	100	62.052	ENSOMEG00000006915	pop1	99	62.246	Oryzias_melastigma
ENSGACG00000003499	pop1	100	46.212	ENSOGAG00000001466	POP1	100	45.928	Otolemur_garnettii
ENSGACG00000003499	pop1	100	46.673	ENSPPAG00000018410	POP1	100	47.053	Pan_paniscus
ENSGACG00000003499	pop1	100	46.213	ENSPPRG00000005002	POP1	100	46.309	Panthera_pardus
ENSGACG00000003499	pop1	100	46.117	ENSPTIG00000016527	POP1	100	46.309	Panthera_tigris_altaica
ENSGACG00000003499	pop1	100	46.762	ENSPTRG00000020458	POP1	100	47.143	Pan_troglodytes
ENSGACG00000003499	pop1	100	46.520	ENSPANG00000009704	POP1	100	46.520	Papio_anubis
ENSGACG00000003499	pop1	100	55.182	ENSPKIG00000016325	POP1	100	55.651	Paramormyrops_kingsleyae
ENSGACG00000003499	pop1	100	45.429	ENSPSIG00000012343	POP1	100	45.731	Pelodiscus_sinensis
ENSGACG00000003499	pop1	90	62.947	ENSPMGG00000022253	POP1	94	62.620	Periophthalmus_magnuspinnatus
ENSGACG00000003499	pop1	99	43.750	ENSPEMG00000023633	Pop1	100	43.750	Peromyscus_maniculatus_bairdii
ENSGACG00000003499	pop1	90	41.189	ENSPMAG00000003209	POP1	99	41.096	Petromyzon_marinus
ENSGACG00000003499	pop1	100	43.889	ENSPCIG00000012216	POP1	100	44.229	Phascolarctos_cinereus
ENSGACG00000003499	pop1	100	63.542	ENSPFOG00000012490	POP1	96	70.421	Poecilia_formosa
ENSGACG00000003499	pop1	92	70.285	ENSPLAG00000004646	POP1	96	70.556	Poecilia_latipinna
ENSGACG00000003499	pop1	92	70.135	ENSPMEG00000019592	POP1	100	63.419	Poecilia_mexicana
ENSGACG00000003499	pop1	100	63.654	ENSPREG00000020951	POP1	100	63.654	Poecilia_reticulata
ENSGACG00000003499	pop1	100	46.660	ENSPPYG00000018777	POP1	100	46.660	Pongo_abelii
ENSGACG00000003499	pop1	100	43.750	ENSPCAG00000016662	POP1	100	43.750	Procavia_capensis
ENSGACG00000003499	pop1	100	45.758	ENSPCOG00000019420	POP1	100	45.758	Propithecus_coquereli
ENSGACG00000003499	pop1	100	45.865	ENSPVAG00000014468	POP1	100	46.058	Pteropus_vampyrus
ENSGACG00000003499	pop1	94	71.739	ENSPNYG00000004476	pop1	100	62.201	Pundamilia_nyererei
ENSGACG00000003499	pop1	100	52.262	ENSPNAG00000000265	pop1	100	52.078	Pygocentrus_nattereri
ENSGACG00000003499	pop1	100	45.053	ENSRNOG00000005243	Pop1	100	44.861	Rattus_norvegicus
ENSGACG00000003499	pop1	100	46.330	ENSRBIG00000007996	POP1	100	46.330	Rhinopithecus_bieti
ENSGACG00000003499	pop1	100	46.425	ENSRROG00000012334	POP1	100	46.425	Rhinopithecus_roxellana
ENSGACG00000003499	pop1	99	45.910	ENSSBOG00000020830	POP1	100	46.006	Saimiri_boliviensis_boliviensis
ENSGACG00000003499	pop1	100	44.873	ENSSHAG00000000296	POP1	100	44.873	Sarcophilus_harrisii
ENSGACG00000003499	pop1	100	55.513	ENSSFOG00015007429	pop1	99	55.418	Scleropages_formosus
ENSGACG00000003499	pop1	92	72.306	ENSSMAG00000010467	POP1	100	65.143	Scophthalmus_maximus
ENSGACG00000003499	pop1	93	77.628	ENSSDUG00000007817	POP1	100	69.639	Seriola_dumerili
ENSGACG00000003499	pop1	100	69.260	ENSSLDG00000012565	POP1	100	69.450	Seriola_lalandi_dorsalis
ENSGACG00000003499	pop1	100	43.810	ENSSPUG00000003550	-	100	43.524	Sphenodon_punctatus
ENSGACG00000003499	pop1	100	66.345	ENSSPAG00000014955	pop1	100	65.670	Stegastes_partitus
ENSGACG00000003499	pop1	100	46.169	ENSSSCG00000006078	POP1	100	45.881	Sus_scrofa
ENSGACG00000003499	pop1	92	43.224	ENSTGUG00000012011	-	100	43.121	Taeniopygia_guttata
ENSGACG00000003499	pop1	100	62.056	ENSTRUG00000010856	pop1	100	61.960	Takifugu_rubripes
ENSGACG00000003499	pop1	94	67.650	ENSTNIG00000013297	pop1	100	67.650	Tetraodon_nigroviridis
ENSGACG00000003499	pop1	92	45.417	ENSTBEG00000014214	POP1	96	45.520	Tupaia_belangeri
ENSGACG00000003499	pop1	100	45.307	ENSTTRG00000016071	POP1	100	45.498	Tursiops_truncatus
ENSGACG00000003499	pop1	91	48.051	ENSUAMG00000017309	POP1	94	48.109	Ursus_americanus
ENSGACG00000003499	pop1	100	45.351	ENSUMAG00000016952	POP1	100	48.315	Ursus_maritimus
ENSGACG00000003499	pop1	83	50.000	ENSVPAG00000008278	POP1	81	50.735	Vicugna_pacos
ENSGACG00000003499	pop1	100	45.941	ENSVVUG00000010994	POP1	100	45.845	Vulpes_vulpes
ENSGACG00000003499	pop1	91	60.952	ENSXCOG00000017043	POP1	100	56.447	Xiphophorus_couchianus
ENSGACG00000003499	pop1	91	70.285	ENSXMAG00000002472	POP1	100	63.654	Xiphophorus_maculatus