EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000003636 (Gene tree)
Gene ID: -
Gene Symbol: raly
Alias: zgc:103445
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 12612 bases
Position: chrgroupXVII:1058471-1071082
Accession: ZDB-GENE-041010-127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000004769	RRM_1	PF00076.22	8.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000004783	-	825	-	ENSGACP00000004769	275 (aa)	-	G3NHG1

Gene Model

Click here to download ENSGACG00000003636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000003636	raly	80	45.217	ENSGACG00000018932	-	90	45.374
ENSGACG00000003636	raly	81	48.918	ENSGACG00000017772	-	84	51.339
ENSGACG00000003636	raly	65	60.440	ENSGACG00000004991	-	100	60.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003636	raly	76	73.113	ENSG00000125970	RALY	100	84.270	Homo_sapiens
ENSGACG00000003636	raly	96	73.818	ENSAPOG00000001026	raly	94	73.818	Acanthochromis_polyacanthus
ENSGACG00000003636	raly	77	74.419	ENSAMEG00000009050	RALY	70	74.419	Ailuropoda_melanoleuca
ENSGACG00000003636	raly	79	85.909	ENSACIG00000024288	raly	85	85.909	Amphilophus_citrinellus
ENSGACG00000003636	raly	99	70.423	ENSAOCG00000009883	raly	86	68.310	Amphiprion_ocellaris
ENSGACG00000003636	raly	99	70.775	ENSAPEG00000024106	raly	87	68.662	Amphiprion_percula
ENSGACG00000003636	raly	100	68.667	ENSATEG00000004870	raly	99	70.100	Anabas_testudineus
ENSGACG00000003636	raly	96	67.041	ENSAPLG00000012983	RALY	80	72.444	Anas_platyrhynchos
ENSGACG00000003636	raly	83	72.609	ENSACAG00000008983	RALY	70	73.009	Anolis_carolinensis
ENSGACG00000003636	raly	81	69.469	ENSANAG00000019376	RALY	76	69.298	Aotus_nancymaae
ENSGACG00000003636	raly	99	77.465	ENSACLG00000007561	raly	88	74.205	Astatotilapia_calliptera
ENSGACG00000003636	raly	81	65.333	ENSBTAG00000016524	RALY	74	65.044	Bos_taurus
ENSGACG00000003636	raly	81	63.274	ENSCJAG00000009449	-	72	63.158	Callithrix_jacchus
ENSGACG00000003636	raly	81	69.469	ENSCJAG00000018361	-	73	69.298	Callithrix_jacchus
ENSGACG00000003636	raly	77	74.419	ENSCAFG00000007490	RALY	77	71.239	Canis_familiaris
ENSGACG00000003636	raly	77	74.419	ENSCAFG00020005069	RALY	77	71.239	Canis_lupus_dingo
ENSGACG00000003636	raly	77	73.953	ENSCHIG00000026609	RALY	76	70.796	Capra_hircus
ENSGACG00000003636	raly	77	72.093	ENSTSYG00000002598	RALY	77	69.163	Carlito_syrichta
ENSGACG00000003636	raly	81	58.850	ENSCAPG00000008110	RALY	99	58.850	Cavia_aperea
ENSGACG00000003636	raly	81	69.912	ENSCPOG00000000309	RALY	99	64.159	Cavia_porcellus
ENSGACG00000003636	raly	81	69.469	ENSCCAG00000024548	RALY	75	69.298	Cebus_capucinus
ENSGACG00000003636	raly	81	69.778	ENSCATG00000031769	RALY	73	69.298	Cercocebus_atys
ENSGACG00000003636	raly	81	69.469	ENSCLAG00000016899	RALY	72	69.469	Chinchilla_lanigera
ENSGACG00000003636	raly	81	69.778	ENSCSAG00000012199	RALY	72	69.298	Chlorocebus_sabaeus
ENSGACG00000003636	raly	77	65.116	ENSCHOG00000000266	RALY	97	62.389	Choloepus_hoffmanni
ENSGACG00000003636	raly	83	73.043	ENSCPBG00000019164	RALY	85	73.451	Chrysemys_picta_bellii
ENSGACG00000003636	raly	76	73.585	ENSCANG00000037952	RALY	76	69.298	Colobus_angolensis_palliatus
ENSGACG00000003636	raly	81	70.222	ENSCGRG00001014652	Raly	71	69.912	Cricetulus_griseus_chok1gshd
ENSGACG00000003636	raly	81	70.222	ENSCGRG00000011726	Raly	71	69.912	Cricetulus_griseus_crigri
ENSGACG00000003636	raly	97	70.522	ENSDARG00000059972	raly	81	78.733	Danio_rerio
ENSGACG00000003636	raly	77	66.977	ENSDNOG00000046782	-	76	64.159	Dasypus_novemcinctus
ENSGACG00000003636	raly	77	72.558	ENSDNOG00000003227	-	81	69.469	Dasypus_novemcinctus
ENSGACG00000003636	raly	81	65.778	ENSDORG00000013400	Raly	99	65.778	Dipodomys_ordii
ENSGACG00000003636	raly	77	62.326	ENSETEG00000012464	-	98	62.326	Echinops_telfairi
ENSGACG00000003636	raly	69	57.812	ENSETEG00000001919	-	62	57.812	Echinops_telfairi
ENSGACG00000003636	raly	81	71.239	ENSEASG00005008501	RALY	75	71.239	Equus_asinus_asinus
ENSGACG00000003636	raly	81	71.239	ENSECAG00000030217	-	75	71.239	Equus_caballus
ENSGACG00000003636	raly	81	71.239	ENSECAG00000012357	RALY	75	71.239	Equus_caballus
ENSGACG00000003636	raly	81	71.239	ENSECAG00000037642	-	75	71.239	Equus_caballus
ENSGACG00000003636	raly	81	58.222	ENSEEUG00000005356	RALY	74	58.150	Erinaceus_europaeus
ENSGACG00000003636	raly	95	67.509	ENSELUG00000011138	raly	81	74.262	Esox_lucius
ENSGACG00000003636	raly	81	71.239	ENSFCAG00000025252	RALY	76	71.239	Felis_catus
ENSGACG00000003636	raly	81	67.699	ENSFDAG00000010175	RALY	100	85.882	Fukomys_damarensis
ENSGACG00000003636	raly	80	80.455	ENSFHEG00000018618	raly	84	80.455	Fundulus_heteroclitus
ENSGACG00000003636	raly	79	63.927	ENSGMOG00000012589	raly	99	64.815	Gadus_morhua
ENSGACG00000003636	raly	96	67.041	ENSGALG00000033696	RALY	84	73.451	Gallus_gallus
ENSGACG00000003636	raly	83	73.043	ENSGAGG00000016266	RALY	71	73.451	Gopherus_agassizii
ENSGACG00000003636	raly	76	73.585	ENSGGOG00000022709	RALY	75	69.298	Gorilla_gorilla
ENSGACG00000003636	raly	97	67.213	ENSHBUG00000021321	raly	70	79.452	Haplochromis_burtoni
ENSGACG00000003636	raly	81	69.912	ENSHGLG00000017779	-	99	63.717	Heterocephalus_glaber_female
ENSGACG00000003636	raly	81	60.177	ENSHGLG00000021175	-	72	59.735	Heterocephalus_glaber_female
ENSGACG00000003636	raly	81	51.327	ENSHGLG00100000278	-	81	51.327	Heterocephalus_glaber_male
ENSGACG00000003636	raly	81	69.912	ENSHGLG00100003933	RALY	100	71.975	Heterocephalus_glaber_male
ENSGACG00000003636	raly	81	50.000	ENSHGLG00100003829	-	74	50.000	Heterocephalus_glaber_male
ENSGACG00000003636	raly	83	54.701	ENSHCOG00000012268	raly	93	55.947	Hippocampus_comes
ENSGACG00000003636	raly	81	71.111	ENSSTOG00000008810	RALY	75	70.614	Ictidomys_tridecemlineatus
ENSGACG00000003636	raly	81	65.487	ENSJJAG00000008473	Raly	100	71.338	Jaculus_jaculus
ENSGACG00000003636	raly	87	69.295	ENSKMAG00000015656	raly	80	76.995	Kryptolebias_marmoratus
ENSGACG00000003636	raly	80	84.615	ENSLBEG00000022656	raly	85	84.615	Labrus_bergylta
ENSGACG00000003636	raly	88	66.939	ENSLACG00000008596	RALY	78	72.072	Latimeria_chalumnae
ENSGACG00000003636	raly	97	71.956	ENSLOCG00000007219	raly	79	80.543	Lepisosteus_oculatus
ENSGACG00000003636	raly	77	74.884	ENSLAFG00000000321	RALY	68	74.884	Loxodonta_africana
ENSGACG00000003636	raly	76	73.113	ENSMFAG00000033131	RALY	73	68.860	Macaca_fascicularis
ENSGACG00000003636	raly	76	73.113	ENSMMUG00000018093	RALY	74	68.860	Macaca_mulatta
ENSGACG00000003636	raly	76	73.113	ENSMNEG00000044988	RALY	74	68.860	Macaca_nemestrina
ENSGACG00000003636	raly	76	73.585	ENSMLEG00000028900	RALY	73	69.298	Mandrillus_leucophaeus
ENSGACG00000003636	raly	100	69.024	ENSMAMG00000012529	raly	85	68.243	Mastacembelus_armatus
ENSGACG00000003636	raly	78	80.930	ENSMZEG00005016550	raly	65	80.930	Maylandia_zebra
ENSGACG00000003636	raly	77	76.526	ENSMGAG00000002214	RALY	70	76.526	Meleagris_gallopavo
ENSGACG00000003636	raly	81	65.487	ENSMAUG00000005739	Raly	99	65.487	Mesocricetus_auratus
ENSGACG00000003636	raly	81	71.556	ENSMICG00000039074	RALY	76	71.239	Microcebus_murinus
ENSGACG00000003636	raly	81	69.912	ENSMOCG00000009450	Raly	71	69.912	Microtus_ochrogaster
ENSGACG00000003636	raly	80	85.202	ENSMMOG00000013788	raly	86	85.202	Mola_mola
ENSGACG00000003636	raly	96	60.507	ENSMODG00000002819	-	81	65.106	Monodelphis_domestica
ENSGACG00000003636	raly	100	77.778	ENSMALG00000007071	raly	74	74.653	Monopterus_albus
ENSGACG00000003636	raly	81	68.584	MGP_CAROLIEiJ_G0024519	Raly	100	72.611	Mus_caroli
ENSGACG00000003636	raly	81	69.027	ENSMUSG00000027593	Raly	100	72.611	Mus_musculus
ENSGACG00000003636	raly	81	69.333	MGP_PahariEiJ_G0025963	Raly	100	72.611	Mus_pahari
ENSGACG00000003636	raly	81	69.333	MGP_SPRETEiJ_G0025441	Raly	100	72.611	Mus_spretus
ENSGACG00000003636	raly	77	74.419	ENSMPUG00000017820	RALY	77	71.239	Mustela_putorius_furo
ENSGACG00000003636	raly	77	74.884	ENSMLUG00000005330	-	77	71.681	Myotis_lucifugus
ENSGACG00000003636	raly	81	63.229	ENSMLUG00000027895	-	75	64.444	Myotis_lucifugus
ENSGACG00000003636	raly	81	65.487	ENSNGAG00000001263	Raly	99	65.487	Nannospalax_galili
ENSGACG00000003636	raly	97	67.541	ENSNBRG00000014761	raly	70	79.909	Neolamprologus_brichardi
ENSGACG00000003636	raly	82	53.478	ENSNLEG00000010031	-	66	63.953	Nomascus_leucogenys
ENSGACG00000003636	raly	81	69.333	ENSOPRG00000008423	RALY	74	69.027	Ochotona_princeps
ENSGACG00000003636	raly	67	51.596	ENSODEG00000011160	-	74	49.246	Octodon_degus
ENSGACG00000003636	raly	77	57.477	ENSODEG00000012831	-	100	57.477	Octodon_degus
ENSGACG00000003636	raly	81	65.044	ENSODEG00000008369	-	74	65.044	Octodon_degus
ENSGACG00000003636	raly	99	76.491	ENSONIG00000004416	raly	98	74.113	Oreochromis_niloticus
ENSGACG00000003636	raly	77	73.488	ENSOCUG00000000477	RALY	61	70.354	Oryctolagus_cuniculus
ENSGACG00000003636	raly	81	69.432	ENSOGAG00000032337	RALY	72	69.432	Otolemur_garnettii
ENSGACG00000003636	raly	77	73.953	ENSOARG00000008957	RALY	76	70.796	Ovis_aries
ENSGACG00000003636	raly	76	73.585	ENSPPAG00000034951	RALY	74	69.298	Pan_paniscus
ENSGACG00000003636	raly	81	71.556	ENSPPRG00000014593	RALY	76	71.239	Panthera_pardus
ENSGACG00000003636	raly	81	71.556	ENSPTIG00000021910	RALY	76	71.239	Panthera_tigris_altaica
ENSGACG00000003636	raly	76	73.585	ENSPTRG00000013410	RALY	74	69.298	Pan_troglodytes
ENSGACG00000003636	raly	76	73.585	ENSPANG00000018093	RALY	73	69.298	Papio_anubis
ENSGACG00000003636	raly	98	66.323	ENSPKIG00000004894	raly	79	77.828	Paramormyrops_kingsleyae
ENSGACG00000003636	raly	83	63.900	ENSPSIG00000017714	RALY	81	64.135	Pelodiscus_sinensis
ENSGACG00000003636	raly	81	65.778	ENSPEMG00000021466	Raly	73	65.487	Peromyscus_maniculatus_bairdii
ENSGACG00000003636	raly	96	62.921	ENSPCIG00000011153	-	80	69.955	Phascolarctos_cinereus
ENSGACG00000003636	raly	76	73.585	ENSPPYG00000010932	RALY	75	69.298	Pongo_abelii
ENSGACG00000003636	raly	81	61.062	ENSPCAG00000016867	RALY	76	60.965	Procavia_capensis
ENSGACG00000003636	raly	81	69.778	ENSPCOG00000016363	RALY	76	69.912	Propithecus_coquereli
ENSGACG00000003636	raly	77	73.953	ENSPVAG00000015827	RALY	77	70.796	Pteropus_vampyrus
ENSGACG00000003636	raly	78	79.535	ENSPNYG00000011247	raly	65	79.535	Pundamilia_nyererei
ENSGACG00000003636	raly	96	66.667	ENSPNAG00000011812	raly	81	75.446	Pygocentrus_nattereri
ENSGACG00000003636	raly	81	69.333	ENSRNOG00000017405	Raly	72	69.027	Rattus_norvegicus
ENSGACG00000003636	raly	76	73.585	ENSRBIG00000030203	RALY	72	69.298	Rhinopithecus_bieti
ENSGACG00000003636	raly	81	69.778	ENSRROG00000038781	RALY	72	69.298	Rhinopithecus_roxellana
ENSGACG00000003636	raly	81	69.027	ENSSBOG00000001418	RALY	74	68.860	Saimiri_boliviensis_boliviensis
ENSGACG00000003636	raly	77	67.136	ENSSHAG00000016830	RALY	68	67.606	Sarcophilus_harrisii
ENSGACG00000003636	raly	97	69.424	ENSSFOG00015012304	raly	83	78.733	Scleropages_formosus
ENSGACG00000003636	raly	97	72.028	ENSSMAG00000001107	raly	95	70.629	Scophthalmus_maximus
ENSGACG00000003636	raly	97	76.512	ENSSDUG00000002411	raly	95	76.868	Seriola_dumerili
ENSGACG00000003636	raly	99	74.825	ENSSLDG00000017872	raly	97	74.216	Seriola_lalandi_dorsalis
ENSGACG00000003636	raly	76	58.962	ENSSARG00000002763	-	69	58.962	Sorex_araneus
ENSGACG00000003636	raly	98	65.556	ENSSPUG00000006251	RALY	82	76.415	Sphenodon_punctatus
ENSGACG00000003636	raly	70	82.564	ENSSPAG00000022480	-	76	82.564	Stegastes_partitus
ENSGACG00000003636	raly	81	71.681	ENSSSCG00000007275	RALY	69	71.491	Sus_scrofa
ENSGACG00000003636	raly	77	76.056	ENSTGUG00000003715	RALY	99	76.056	Taeniopygia_guttata
ENSGACG00000003636	raly	81	55.752	ENSTBEG00000009812	RALY	72	55.752	Tupaia_belangeri
ENSGACG00000003636	raly	77	72.430	ENSTTRG00000006590	RALY	71	72.430	Tursiops_truncatus
ENSGACG00000003636	raly	77	74.419	ENSUAMG00000006993	RALY	78	71.239	Ursus_americanus
ENSGACG00000003636	raly	77	74.419	ENSUMAG00000024106	RALY	77	71.239	Ursus_maritimus
ENSGACG00000003636	raly	62	68.786	ENSVPAG00000000373	RALY	58	68.786	Vicugna_pacos
ENSGACG00000003636	raly	77	74.419	ENSVVUG00000004546	RALY	77	71.239	Vulpes_vulpes
ENSGACG00000003636	raly	97	59.507	ENSXETG00000019514	raly	82	66.109	Xenopus_tropicalis