EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000003819 (Gene tree)
Gene ID: -
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b%2C subunit 4
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3725 bases
Position: chrgroupX:5284445-5288169
Accession: ZDB-GENE-020419-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005037	RRM_1	PF00076.22	2.3e-39	1	2
ENSGACP00000005037	RRM_1	PF00076.22	2.3e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005052	-	1325	-	ENSGACP00000005037	395 (aa)	-	G3NI77

Gene Model

Click here to download ENSGACG00000003819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003819	sf3b4	58	97.807	ENSG00000143368	SF3B4	100	96.842	Homo_sapiens
ENSGACG00000003819	sf3b4	58	99.565	ENSAPOG00000017647	sf3b4	57	100.000	Acanthochromis_polyacanthus
ENSGACG00000003819	sf3b4	60	99.576	ENSAOCG00000019801	sf3b4	59	99.576	Amphiprion_ocellaris
ENSGACG00000003819	sf3b4	60	99.576	ENSAPEG00000010365	sf3b4	59	99.576	Amphiprion_percula
ENSGACG00000003819	sf3b4	58	99.565	ENSATEG00000012844	sf3b4	56	100.000	Anabas_testudineus
ENSGACG00000003819	sf3b4	60	97.046	ENSACLG00000014260	sf3b4	56	99.558	Astatotilapia_calliptera
ENSGACG00000003819	sf3b4	58	97.826	ENSAMXG00000008282	sf3b4	56	99.115	Astyanax_mexicanus
ENSGACG00000003819	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	54	98.678	Chrysemys_picta_bellii
ENSGACG00000003819	sf3b4	57	87.665	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSGACG00000003819	sf3b4	53	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSGACG00000003819	sf3b4	66	93.511	ENSCVAG00000005536	sf3b4	54	100.000	Cyprinodon_variegatus
ENSGACG00000003819	sf3b4	58	98.261	ENSDARG00000018574	sf3b4	57	99.119	Danio_rerio
ENSGACG00000003819	sf3b4	58	81.579	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSGACG00000003819	sf3b4	87	84.527	ENSELUG00000012876	sf3b4	59	99.153	Esox_lucius
ENSGACG00000003819	sf3b4	66	95.038	ENSGAFG00000010181	sf3b4	58	100.000	Gambusia_affinis
ENSGACG00000003819	sf3b4	91	62.434	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSGACG00000003819	sf3b4	60	97.046	ENSHBUG00000002028	sf3b4	56	99.558	Haplochromis_burtoni
ENSGACG00000003819	sf3b4	58	97.807	ENSHGLG00100008533	SF3B4	50	100.000	Heterocephalus_glaber_male
ENSGACG00000003819	sf3b4	99	81.955	ENSHCOG00000003014	sf3b4	57	97.357	Hippocampus_comes
ENSGACG00000003819	sf3b4	58	98.696	ENSIPUG00000012242	Sf3b4	57	99.559	Ictalurus_punctatus
ENSGACG00000003819	sf3b4	60	97.468	ENSKMAG00000008154	sf3b4	58	100.000	Kryptolebias_marmoratus
ENSGACG00000003819	sf3b4	61	99.163	ENSLBEG00000026818	sf3b4	100	91.228	Labrus_bergylta
ENSGACG00000003819	sf3b4	93	58.333	ENSMFAG00000039067	-	53	79.899	Macaca_fascicularis
ENSGACG00000003819	sf3b4	93	57.812	ENSMNEG00000031526	-	53	79.500	Macaca_nemestrina
ENSGACG00000003819	sf3b4	60	97.468	ENSMAMG00000014692	sf3b4	57	99.558	Mastacembelus_armatus
ENSGACG00000003819	sf3b4	60	97.046	ENSMZEG00005026741	sf3b4	56	99.558	Maylandia_zebra
ENSGACG00000003819	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	55	99.119	Meleagris_gallopavo
ENSGACG00000003819	sf3b4	66	98.069	ENSMMOG00000018032	sf3b4	61	99.160	Mola_mola
ENSGACG00000003819	sf3b4	57	99.559	ENSMALG00000006174	sf3b4	56	99.559	Monopterus_albus
ENSGACG00000003819	sf3b4	60	97.468	ENSNBRG00000013865	sf3b4	56	100.000	Neolamprologus_brichardi
ENSGACG00000003819	sf3b4	90	69.169	ENSNLEG00000000537	-	54	90.094	Nomascus_leucogenys
ENSGACG00000003819	sf3b4	99	48.122	ENSNLEG00000009693	-	99	48.122	Nomascus_leucogenys
ENSGACG00000003819	sf3b4	87	59.116	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSGACG00000003819	sf3b4	58	80.786	ENSODEG00000003597	-	52	82.547	Octodon_degus
ENSGACG00000003819	sf3b4	60	96.624	ENSONIG00000002730	sf3b4	56	99.558	Oreochromis_niloticus
ENSGACG00000003819	sf3b4	66	72.761	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSGACG00000003819	sf3b4	74	83.388	ENSORLG00000003062	sf3b4	58	99.558	Oryzias_latipes
ENSGACG00000003819	sf3b4	74	83.388	ENSORLG00020000687	sf3b4	57	99.558	Oryzias_latipes_hni
ENSGACG00000003819	sf3b4	74	83.388	ENSORLG00015010989	sf3b4	57	99.558	Oryzias_latipes_hsok
ENSGACG00000003819	sf3b4	59	97.845	ENSOMEG00000013694	sf3b4	57	99.558	Oryzias_melastigma
ENSGACG00000003819	sf3b4	76	73.163	ENSPPAG00000030024	-	51	89.100	Pan_paniscus
ENSGACG00000003819	sf3b4	76	75.329	ENSPTRG00000049727	-	53	89.573	Pan_troglodytes
ENSGACG00000003819	sf3b4	59	98.718	ENSPKIG00000020669	sf3b4	60	100.000	Paramormyrops_kingsleyae
ENSGACG00000003819	sf3b4	66	95.038	ENSPFOG00000005754	sf3b4	58	99.559	Poecilia_formosa
ENSGACG00000003819	sf3b4	66	95.038	ENSPLAG00000001401	sf3b4	63	99.559	Poecilia_latipinna
ENSGACG00000003819	sf3b4	66	95.038	ENSPREG00000011076	sf3b4	56	100.000	Poecilia_reticulata
ENSGACG00000003819	sf3b4	53	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSGACG00000003819	sf3b4	60	97.046	ENSPNYG00000012700	sf3b4	56	99.558	Pundamilia_nyererei
ENSGACG00000003819	sf3b4	58	98.261	ENSPNAG00000000686	sf3b4	58	99.119	Pygocentrus_nattereri
ENSGACG00000003819	sf3b4	92	55.759	ENSRROG00000028213	-	51	75.000	Rhinopithecus_roxellana
ENSGACG00000003819	sf3b4	60	97.890	ENSSFOG00015008864	sf3b4	56	100.000	Scleropages_formosus
ENSGACG00000003819	sf3b4	100	89.277	ENSSMAG00000006837	sf3b4	59	99.576	Scophthalmus_maximus
ENSGACG00000003819	sf3b4	66	95.802	ENSSDUG00000012064	sf3b4	59	98.729	Seriola_dumerili
ENSGACG00000003819	sf3b4	66	96.183	ENSSLDG00000014226	sf3b4	59	99.153	Seriola_lalandi_dorsalis
ENSGACG00000003819	sf3b4	61	95.436	ENSSPUG00000001028	SF3B4	57	98.678	Sphenodon_punctatus
ENSGACG00000003819	sf3b4	60	99.576	ENSSPAG00000019219	sf3b4	59	99.576	Stegastes_partitus
ENSGACG00000003819	sf3b4	60	96.203	ENSTGUG00000004470	SF3B4	89	98.678	Taeniopygia_guttata
ENSGACG00000003819	sf3b4	79	90.159	ENSTRUG00000004516	sf3b4	60	98.319	Takifugu_rubripes
ENSGACG00000003819	sf3b4	58	98.261	ENSTNIG00000009156	sf3b4	58	99.119	Tetraodon_nigroviridis
ENSGACG00000003819	sf3b4	58	97.807	ENSUMAG00000003802	SF3B4	50	100.000	Ursus_maritimus
ENSGACG00000003819	sf3b4	58	97.807	ENSVVUG00000007732	-	54	100.000	Vulpes_vulpes
ENSGACG00000003819	sf3b4	59	92.275	ENSXETG00000011038	sf3b4	53	100.000	Xenopus_tropicalis
ENSGACG00000003819	sf3b4	58	99.565	ENSXCOG00000019895	sf3b4	58	100.000	Xiphophorus_couchianus
ENSGACG00000003819	sf3b4	58	99.565	ENSXMAG00000003772	sf3b4	58	100.000	Xiphophorus_maculatus