EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000003831 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 1415 bases
Position: chrgroupXVII:1268650-1270064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005025	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005040	-	540	-	ENSGACP00000005025	180 (aa)	-	G3NI65

Gene Model

Click here to download ENSGACG00000003831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000003831	-	92	30.337	ENSGACG00000008616	sar1ab	94	30.337
ENSGACG00000003831	-	84	47.712	ENSGACG00000015399	arl11	88	47.712
ENSGACG00000003831	-	96	43.017	ENSGACG00000000497	-	89	43.017
ENSGACG00000003831	-	92	30.337	ENSGACG00000002365	-	89	30.337
ENSGACG00000003831	-	98	45.198	ENSGACG00000004052	arl8	98	45.198
ENSGACG00000003831	-	93	42.690	ENSGACG00000016756	-	93	42.690
ENSGACG00000003831	-	93	43.860	ENSGACG00000003070	arl3	89	44.578
ENSGACG00000003831	-	99	68.539	ENSGACG00000004343	arf2b	98	68.539
ENSGACG00000003831	-	97	34.973	ENSGACG00000011497	arfrp1	91	34.973
ENSGACG00000003831	-	91	44.785	ENSGACG00000018033	arl3l2	87	44.785
ENSGACG00000003831	-	90	46.429	ENSGACG00000003710	arl4d	85	46.429
ENSGACG00000003831	-	99	67.416	ENSGACG00000012500	-	98	67.416
ENSGACG00000003831	-	99	67.416	ENSGACG00000009120	-	98	67.416
ENSGACG00000003831	-	99	44.944	ENSGACG00000001204	arl5a	97	44.944
ENSGACG00000003831	-	99	42.697	ENSGACG00000009321	arl5c	98	42.697
ENSGACG00000003831	-	95	47.458	ENSGACG00000008143	arl4cb	92	47.458
ENSGACG00000003831	-	97	52.874	ENSGACG00000019098	arl1	96	52.874
ENSGACG00000003831	-	89	51.829	ENSGACG00000010096	-	94	51.829
ENSGACG00000003831	-	92	41.176	ENSGACG00000013840	arl14	93	41.176
ENSGACG00000003831	-	82	31.081	ENSGACG00000011972	arl8bb	89	31.081
ENSGACG00000003831	-	92	40.000	ENSGACG00000015382	ARL6	91	40.000
ENSGACG00000003831	-	99	44.865	ENSGACG00000000500	-	93	44.865
ENSGACG00000003831	-	99	67.416	ENSGACG00000000746	arf3b	98	67.416
ENSGACG00000003831	-	99	67.598	ENSGACG00000017437	-	98	67.416
ENSGACG00000003831	-	93	40.698	ENSGACG00000006779	-	92	40.698
ENSGACG00000003831	-	89	49.102	ENSGACG00000012810	arl4aa	83	49.102
ENSGACG00000003831	-	99	65.169	ENSGACG00000014195	-	95	65.169
ENSGACG00000003831	-	99	66.854	ENSGACG00000000686	arf5	98	66.854
ENSGACG00000003831	-	90	48.148	ENSGACG00000019812	arl2	88	48.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003831	-	99	89.385	ENSAPEG00000002838	-	99	89.385	Amphiprion_percula
ENSGACG00000003831	-	94	81.176	ENSATEG00000003808	-	96	81.176	Anabas_testudineus
ENSGACG00000003831	-	99	88.827	ENSATEG00000003847	-	99	88.827	Anabas_testudineus
ENSGACG00000003831	-	96	87.209	ENSACLG00000009822	-	91	87.209	Astatotilapia_calliptera
ENSGACG00000003831	-	83	75.839	ENSCVAG00000013902	-	90	75.839	Cyprinodon_variegatus
ENSGACG00000003831	-	87	89.809	ENSFHEG00000019659	-	88	89.809	Fundulus_heteroclitus
ENSGACG00000003831	-	62	91.964	ENSGAFG00000002801	-	98	91.964	Gambusia_affinis
ENSGACG00000003831	-	99	84.358	ENSHBUG00000001250	-	99	84.358	Haplochromis_burtoni
ENSGACG00000003831	-	99	89.888	ENSLBEG00000027205	-	99	89.888	Labrus_bergylta
ENSGACG00000003831	-	99	88.268	ENSMAMG00000013955	-	99	88.268	Mastacembelus_armatus
ENSGACG00000003831	-	99	86.592	ENSMZEG00005016277	-	99	86.592	Maylandia_zebra
ENSGACG00000003831	-	99	86.592	ENSMZEG00005016274	-	99	86.592	Maylandia_zebra
ENSGACG00000003831	-	99	84.358	ENSMMOG00000013651	-	98	84.358	Mola_mola
ENSGACG00000003831	-	99	84.916	ENSONIG00000004340	-	99	84.916	Oreochromis_niloticus
ENSGACG00000003831	-	99	89.385	ENSPLAG00000015887	-	99	89.385	Poecilia_latipinna
ENSGACG00000003831	-	99	89.385	ENSPMEG00000007064	-	99	89.385	Poecilia_mexicana
ENSGACG00000003831	-	96	89.595	ENSPREG00000000912	-	100	89.595	Poecilia_reticulata
ENSGACG00000003831	-	99	76.667	ENSSMAG00000002487	-	99	76.667	Scophthalmus_maximus
ENSGACG00000003831	-	99	88.268	ENSSDUG00000020599	-	99	88.268	Seriola_dumerili
ENSGACG00000003831	-	99	87.709	ENSSLDG00000020097	-	99	87.709	Seriola_lalandi_dorsalis
ENSGACG00000003831	-	99	87.151	ENSSPAG00000017484	-	99	87.151	Stegastes_partitus
ENSGACG00000003831	-	84	78.947	ENSTRUG00000025171	-	93	78.947	Takifugu_rubripes
ENSGACG00000003831	-	63	81.416	ENSTNIG00000005043	-	99	81.416	Tetraodon_nigroviridis
ENSGACG00000003831	-	84	80.263	ENSTNIG00000000796	-	66	80.263	Tetraodon_nigroviridis
ENSGACG00000003831	-	83	78.808	ENSTNIG00000018302	-	66	78.431	Tetraodon_nigroviridis
ENSGACG00000003831	-	83	81.333	ENSTNIG00000001632	-	66	80.921	Tetraodon_nigroviridis
ENSGACG00000003831	-	99	89.385	ENSXMAG00000029601	-	99	89.385	Xiphophorus_maculatus