EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000003912 (Gene tree)
Gene ID: -
Gene Symbol: sub1b
Alias: rpo2tc1|sub1|zgc:92831
Full Name: SUB1 homolog%2C transcriptional regulator b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3022 bases
Position: chrgroupXIII:1455422-1458443
Accession: ZDB-GENE-040718-209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005140	PC4	PF02229.16	3.4e-26	1	1
ENSGACP00000005145	PC4	PF02229.16	4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005155	-	819	-	ENSGACP00000005140	125 (aa)	-	G3NII0
ENSGACT00000005160	-	781	-	ENSGACP00000005145	133 (aa)	-	G3NII5

Gene Model

Click here to download ENSGACG00000003912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003912	sub1b	100	66.929	ENSG00000113387	SUB1	100	71.654	Homo_sapiens
ENSGACG00000003912	sub1b	100	90.400	ENSAPOG00000005917	SUB1	100	90.400	Acanthochromis_polyacanthus
ENSGACG00000003912	sub1b	100	66.929	ENSAMEG00000006238	SUB1	95	71.654	Ailuropoda_melanoleuca
ENSGACG00000003912	sub1b	100	92.800	ENSACIG00000015976	sub1b	100	92.800	Amphilophus_citrinellus
ENSGACG00000003912	sub1b	89	76.577	ENSAOCG00000002323	-	86	77.358	Amphiprion_ocellaris
ENSGACG00000003912	sub1b	92	84.348	ENSAOCG00000007313	-	83	90.196	Amphiprion_ocellaris
ENSGACG00000003912	sub1b	100	92.000	ENSAPEG00000024347	sub1b	100	92.000	Amphiprion_percula
ENSGACG00000003912	sub1b	82	81.373	ENSAPEG00000017151	-	76	81.633	Amphiprion_percula
ENSGACG00000003912	sub1b	52	81.538	ENSAPEG00000014618	-	62	81.538	Amphiprion_percula
ENSGACG00000003912	sub1b	100	91.200	ENSATEG00000010340	sub1b	100	91.200	Anabas_testudineus
ENSGACG00000003912	sub1b	100	63.910	ENSACAG00000007974	SUB1	100	66.917	Anolis_carolinensis
ENSGACG00000003912	sub1b	100	66.929	ENSANAG00000011651	-	100	71.654	Aotus_nancymaae
ENSGACG00000003912	sub1b	100	66.667	ENSANAG00000023392	-	83	70.635	Aotus_nancymaae
ENSGACG00000003912	sub1b	100	92.800	ENSACLG00000016875	sub1b	64	92.800	Astatotilapia_calliptera
ENSGACG00000003912	sub1b	100	82.540	ENSAMXG00000037104	sub1b	100	82.540	Astyanax_mexicanus
ENSGACG00000003912	sub1b	100	66.929	ENSBTAG00000021965	SUB1	100	71.654	Bos_taurus
ENSGACG00000003912	sub1b	75	39.583	WBGene00011743	T13F2.2	80	37.000	Caenorhabditis_elegans
ENSGACG00000003912	sub1b	80	65.686	ENSCJAG00000018718	SUB1	98	71.569	Callithrix_jacchus
ENSGACG00000003912	sub1b	100	66.929	ENSCAFG00000018879	-	88	71.654	Canis_familiaris
ENSGACG00000003912	sub1b	100	66.929	ENSCAFG00000016713	-	96	71.654	Canis_familiaris
ENSGACG00000003912	sub1b	100	65.600	ENSCAFG00000024488	-	100	65.600	Canis_familiaris
ENSGACG00000003912	sub1b	100	66.929	ENSCAFG00020016840	-	100	71.654	Canis_lupus_dingo
ENSGACG00000003912	sub1b	100	71.094	ENSCAFG00020011479	-	77	70.312	Canis_lupus_dingo
ENSGACG00000003912	sub1b	100	66.929	ENSCHIG00000008460	SUB1	100	71.654	Capra_hircus
ENSGACG00000003912	sub1b	100	66.929	ENSTSYG00000029948	-	100	71.654	Carlito_syrichta
ENSGACG00000003912	sub1b	100	63.077	ENSTSYG00000014069	-	93	67.692	Carlito_syrichta
ENSGACG00000003912	sub1b	100	59.843	ENSTSYG00000035366	-	83	64.567	Carlito_syrichta
ENSGACG00000003912	sub1b	100	66.929	ENSCPOG00000031334	SUB1	100	71.654	Cavia_porcellus
ENSGACG00000003912	sub1b	100	63.780	ENSCCAG00000020604	-	100	65.354	Cebus_capucinus
ENSGACG00000003912	sub1b	100	60.317	ENSCCAG00000017043	-	93	64.286	Cebus_capucinus
ENSGACG00000003912	sub1b	100	66.929	ENSCCAG00000023605	-	100	71.654	Cebus_capucinus
ENSGACG00000003912	sub1b	100	64.567	ENSCCAG00000033751	-	99	67.910	Cebus_capucinus
ENSGACG00000003912	sub1b	100	66.929	ENSCATG00000031199	SUB1	100	71.654	Cercocebus_atys
ENSGACG00000003912	sub1b	100	65.625	ENSCLAG00000007522	SUB1	100	71.094	Chinchilla_lanigera
ENSGACG00000003912	sub1b	100	66.929	ENSCSAG00000019449	-	100	70.079	Chlorocebus_sabaeus
ENSGACG00000003912	sub1b	100	66.929	ENSCSAG00000017172	-	100	71.654	Chlorocebus_sabaeus
ENSGACG00000003912	sub1b	100	71.429	ENSCPBG00000024218	SUB1	79	72.222	Chrysemys_picta_bellii
ENSGACG00000003912	sub1b	100	56.349	ENSCANG00000028665	-	90	60.317	Colobus_angolensis_palliatus
ENSGACG00000003912	sub1b	100	66.929	ENSCANG00000029372	SUB1	100	71.654	Colobus_angolensis_palliatus
ENSGACG00000003912	sub1b	100	66.929	ENSCGRG00001003473	-	100	71.654	Cricetulus_griseus_chok1gshd
ENSGACG00000003912	sub1b	100	54.331	ENSCGRG00001016254	-	100	53.175	Cricetulus_griseus_chok1gshd
ENSGACG00000003912	sub1b	100	56.693	ENSCGRG00001014660	-	100	57.480	Cricetulus_griseus_chok1gshd
ENSGACG00000003912	sub1b	100	56.693	ENSCGRG00000019368	-	100	57.480	Cricetulus_griseus_crigri
ENSGACG00000003912	sub1b	100	66.929	ENSCGRG00000001133	-	100	71.654	Cricetulus_griseus_crigri
ENSGACG00000003912	sub1b	100	55.556	ENSCGRG00000001489	-	100	61.111	Cricetulus_griseus_crigri
ENSGACG00000003912	sub1b	99	76.613	ENSDARG00000053446	sub1a	100	80.800	Danio_rerio
ENSGACG00000003912	sub1b	99	83.065	ENSDARG00000007720	sub1b	99	83.065	Danio_rerio
ENSGACG00000003912	sub1b	100	64.567	ENSDNOG00000032396	-	100	69.291	Dasypus_novemcinctus
ENSGACG00000003912	sub1b	100	65.354	ENSDNOG00000040794	-	100	70.079	Dasypus_novemcinctus
ENSGACG00000003912	sub1b	100	66.142	ENSDORG00000013916	Sub1	100	70.866	Dipodomys_ordii
ENSGACG00000003912	sub1b	81	45.545	ENSEBUG00000008746	sub1a	53	45.545	Eptatretus_burgeri
ENSGACG00000003912	sub1b	100	66.929	ENSEASG00005007099	SUB1	100	71.654	Equus_asinus_asinus
ENSGACG00000003912	sub1b	100	66.929	ENSECAG00000012399	SUB1	100	71.654	Equus_caballus
ENSGACG00000003912	sub1b	81	72.549	ENSEEUG00000000436	SUB1	99	73.529	Erinaceus_europaeus
ENSGACG00000003912	sub1b	100	66.929	ENSFCAG00000037288	SUB1	100	71.654	Felis_catus
ENSGACG00000003912	sub1b	100	71.429	ENSFALG00000002143	SUB1	88	71.654	Ficedula_albicollis
ENSGACG00000003912	sub1b	100	66.929	ENSFDAG00000017179	SUB1	100	71.654	Fukomys_damarensis
ENSGACG00000003912	sub1b	100	44.444	ENSGALG00000027147	-	100	44.444	Gallus_gallus
ENSGACG00000003912	sub1b	100	72.222	ENSGALG00000003248	SUB1	100	73.016	Gallus_gallus
ENSGACG00000003912	sub1b	100	71.429	ENSGALG00000034905	-	100	72.222	Gallus_gallus
ENSGACG00000003912	sub1b	100	72.222	ENSGAGG00000013535	SUB1	100	73.016	Gopherus_agassizii
ENSGACG00000003912	sub1b	100	66.929	ENSGGOG00000040900	SUB1	100	71.654	Gorilla_gorilla
ENSGACG00000003912	sub1b	99	79.032	ENSHBUG00000013953	sub1b	95	77.953	Haplochromis_burtoni
ENSGACG00000003912	sub1b	100	66.929	ENSHGLG00000006749	SUB1	100	71.654	Heterocephalus_glaber_female
ENSGACG00000003912	sub1b	100	66.929	ENSHGLG00100014344	SUB1	100	71.654	Heterocephalus_glaber_male
ENSGACG00000003912	sub1b	100	84.800	ENSHCOG00000001809	sub1b	100	84.800	Hippocampus_comes
ENSGACG00000003912	sub1b	100	82.400	ENSIPUG00000008166	sub1	100	82.400	Ictalurus_punctatus
ENSGACG00000003912	sub1b	100	77.344	ENSIPUG00000024367	SUB1	100	78.906	Ictalurus_punctatus
ENSGACG00000003912	sub1b	100	67.717	ENSSTOG00000019364	SUB1	100	72.441	Ictidomys_tridecemlineatus
ENSGACG00000003912	sub1b	100	66.929	ENSJJAG00000018885	Sub1	100	70.866	Jaculus_jaculus
ENSGACG00000003912	sub1b	99	88.710	ENSLBEG00000010728	sub1b	100	88.000	Labrus_bergylta
ENSGACG00000003912	sub1b	52	84.615	ENSLACG00000001068	SUB1	100	84.615	Latimeria_chalumnae
ENSGACG00000003912	sub1b	100	80.000	ENSLOCG00000006692	sub1b	100	80.000	Lepisosteus_oculatus
ENSGACG00000003912	sub1b	100	67.717	ENSLAFG00000032088	-	100	71.654	Loxodonta_africana
ENSGACG00000003912	sub1b	100	67.717	ENSLAFG00000011006	-	100	71.654	Loxodonta_africana
ENSGACG00000003912	sub1b	100	66.929	ENSMFAG00000040728	SUB1	100	71.654	Macaca_fascicularis
ENSGACG00000003912	sub1b	100	59.055	ENSMFAG00000045643	-	63	61.940	Macaca_fascicularis
ENSGACG00000003912	sub1b	100	66.929	ENSMMUG00000046181	SUB1	100	71.654	Macaca_mulatta
ENSGACG00000003912	sub1b	100	66.929	ENSMNEG00000037046	SUB1	100	71.654	Macaca_nemestrina
ENSGACG00000003912	sub1b	100	54.762	ENSMLEG00000043436	-	90	59.524	Mandrillus_leucophaeus
ENSGACG00000003912	sub1b	100	65.354	ENSMLEG00000030509	-	94	69.291	Mandrillus_leucophaeus
ENSGACG00000003912	sub1b	100	66.929	ENSMLEG00000037017	-	100	71.654	Mandrillus_leucophaeus
ENSGACG00000003912	sub1b	100	92.000	ENSMAMG00000018428	sub1b	100	92.000	Mastacembelus_armatus
ENSGACG00000003912	sub1b	100	92.800	ENSMZEG00005021252	sub1b	100	92.800	Maylandia_zebra
ENSGACG00000003912	sub1b	100	72.222	ENSMGAG00000002906	SUB1	100	73.016	Meleagris_gallopavo
ENSGACG00000003912	sub1b	100	44.882	ENSMGAG00000001200	-	96	44.186	Meleagris_gallopavo
ENSGACG00000003912	sub1b	100	66.929	ENSMAUG00000020232	Sub1	100	71.654	Mesocricetus_auratus
ENSGACG00000003912	sub1b	100	66.929	ENSMICG00000014535	SUB1	100	71.654	Microcebus_murinus
ENSGACG00000003912	sub1b	100	66.142	ENSMOCG00000018930	-	100	70.866	Microtus_ochrogaster
ENSGACG00000003912	sub1b	100	57.143	ENSMOCG00000016424	-	100	57.143	Microtus_ochrogaster
ENSGACG00000003912	sub1b	83	75.000	ENSMODG00000020410	SUB1	75	75.000	Monodelphis_domestica
ENSGACG00000003912	sub1b	100	91.200	ENSMALG00000007163	sub1b	84	88.372	Monopterus_albus
ENSGACG00000003912	sub1b	100	66.929	MGP_CAROLIEiJ_G0019676	Sub1	100	71.654	Mus_caroli
ENSGACG00000003912	sub1b	100	66.929	ENSMUSG00000022205	Sub1	100	71.654	Mus_musculus
ENSGACG00000003912	sub1b	100	67.717	MGP_PahariEiJ_G0016056	Sub1	100	72.441	Mus_pahari
ENSGACG00000003912	sub1b	100	66.929	MGP_SPRETEiJ_G0020573	Sub1	100	71.654	Mus_spretus
ENSGACG00000003912	sub1b	100	66.142	ENSMPUG00000018418	-	100	70.866	Mustela_putorius_furo
ENSGACG00000003912	sub1b	100	66.929	ENSMPUG00000015185	-	100	71.654	Mustela_putorius_furo
ENSGACG00000003912	sub1b	100	64.567	ENSMLUG00000009236	-	95	68.504	Myotis_lucifugus
ENSGACG00000003912	sub1b	100	66.929	ENSMLUG00000013685	-	98	70.992	Myotis_lucifugus
ENSGACG00000003912	sub1b	100	66.142	ENSNGAG00000014072	-	100	70.866	Nannospalax_galili
ENSGACG00000003912	sub1b	100	59.524	ENSNGAG00000017212	-	100	57.600	Nannospalax_galili
ENSGACG00000003912	sub1b	100	69.048	ENSNGAG00000010782	-	84	67.460	Nannospalax_galili
ENSGACG00000003912	sub1b	83	89.423	ENSNBRG00000008451	sub1b	85	89.423	Neolamprologus_brichardi
ENSGACG00000003912	sub1b	100	66.142	ENSNLEG00000036068	SUB1	100	70.866	Nomascus_leucogenys
ENSGACG00000003912	sub1b	100	62.698	ENSNLEG00000035968	-	100	66.667	Nomascus_leucogenys
ENSGACG00000003912	sub1b	100	67.717	ENSNLEG00000018383	-	95	72.441	Nomascus_leucogenys
ENSGACG00000003912	sub1b	100	69.841	ENSMEUG00000007770	SUB1	100	73.810	Notamacropus_eugenii
ENSGACG00000003912	sub1b	100	65.354	ENSOPRG00000012887	SUB1	100	70.866	Ochotona_princeps
ENSGACG00000003912	sub1b	86	69.444	ENSODEG00000014558	-	72	69.444	Octodon_degus
ENSGACG00000003912	sub1b	86	67.593	ENSODEG00000015114	-	87	68.519	Octodon_degus
ENSGACG00000003912	sub1b	100	66.929	ENSODEG00000001937	-	100	71.654	Octodon_degus
ENSGACG00000003912	sub1b	100	71.429	ENSOANG00000002328	SUB1	95	75.397	Ornithorhynchus_anatinus
ENSGACG00000003912	sub1b	100	65.354	ENSOCUG00000006262	SUB1	60	67.717	Oryctolagus_cuniculus
ENSGACG00000003912	sub1b	100	66.929	ENSOGAG00000009012	-	100	71.654	Otolemur_garnettii
ENSGACG00000003912	sub1b	98	67.742	ENSOGAG00000000337	-	100	72.581	Otolemur_garnettii
ENSGACG00000003912	sub1b	100	66.929	ENSOARG00000012154	SUB1	100	71.654	Ovis_aries
ENSGACG00000003912	sub1b	100	66.929	ENSPPAG00000011212	SUB1	100	71.654	Pan_paniscus
ENSGACG00000003912	sub1b	100	66.929	ENSPPRG00000008557	SUB1	100	71.654	Panthera_pardus
ENSGACG00000003912	sub1b	100	66.929	ENSPTIG00000009466	SUB1	100	71.654	Panthera_tigris_altaica
ENSGACG00000003912	sub1b	100	61.417	ENSPTRG00000041644	-	100	66.142	Pan_troglodytes
ENSGACG00000003912	sub1b	100	66.929	ENSPTRG00000048895	SUB1	100	71.654	Pan_troglodytes
ENSGACG00000003912	sub1b	100	65.354	ENSPANG00000000672	-	91	69.291	Papio_anubis
ENSGACG00000003912	sub1b	100	66.929	ENSPANG00000000339	-	97	71.654	Papio_anubis
ENSGACG00000003912	sub1b	100	66.929	ENSPANG00000002644	-	95	71.654	Papio_anubis
ENSGACG00000003912	sub1b	100	65.079	ENSPANG00000035601	-	100	68.254	Papio_anubis
ENSGACG00000003912	sub1b	100	58.730	ENSPANG00000033272	-	90	59.524	Papio_anubis
ENSGACG00000003912	sub1b	100	80.800	ENSPKIG00000016923	sub1b	100	80.800	Paramormyrops_kingsleyae
ENSGACG00000003912	sub1b	100	70.635	ENSPSIG00000005731	SUB1	95	71.429	Pelodiscus_sinensis
ENSGACG00000003912	sub1b	100	69.841	ENSPCIG00000020907	-	100	73.810	Phascolarctos_cinereus
ENSGACG00000003912	sub1b	100	68.254	ENSPCIG00000020827	-	100	69.048	Phascolarctos_cinereus
ENSGACG00000003912	sub1b	100	66.929	ENSPPYG00000015379	SUB1	100	71.654	Pongo_abelii
ENSGACG00000003912	sub1b	100	63.780	ENSPPYG00000018347	-	100	68.504	Pongo_abelii
ENSGACG00000003912	sub1b	100	66.929	ENSPCOG00000014391	SUB1	100	71.654	Propithecus_coquereli
ENSGACG00000003912	sub1b	100	66.929	ENSPVAG00000004785	SUB1	100	71.654	Pteropus_vampyrus
ENSGACG00000003912	sub1b	100	92.800	ENSPNYG00000010975	sub1b	100	92.800	Pundamilia_nyererei
ENSGACG00000003912	sub1b	99	82.258	ENSPNAG00000005998	sub1b	99	82.258	Pygocentrus_nattereri
ENSGACG00000003912	sub1b	100	76.984	ENSPNAG00000008693	sub1a	100	76.984	Pygocentrus_nattereri
ENSGACG00000003912	sub1b	100	67.717	ENSRNOG00000050563	Sub1	100	72.441	Rattus_norvegicus
ENSGACG00000003912	sub1b	100	64.286	ENSRBIG00000031233	SUB1	100	68.254	Rhinopithecus_bieti
ENSGACG00000003912	sub1b	100	61.905	ENSRROG00000042718	-	90	65.873	Rhinopithecus_roxellana
ENSGACG00000003912	sub1b	100	66.929	ENSRROG00000040438	SUB1	100	71.654	Rhinopithecus_roxellana
ENSGACG00000003912	sub1b	100	66.929	ENSSBOG00000026994	SUB1	100	71.654	Saimiri_boliviensis_boliviensis
ENSGACG00000003912	sub1b	100	69.841	ENSSHAG00000014986	SUB1	100	73.810	Sarcophilus_harrisii
ENSGACG00000003912	sub1b	100	74.803	ENSSFOG00015018386	sub1b	100	77.953	Scleropages_formosus
ENSGACG00000003912	sub1b	100	76.800	ENSSFOG00015017283	sub1b	100	76.800	Scleropages_formosus
ENSGACG00000003912	sub1b	100	90.400	ENSSMAG00000000313	sub1b	100	90.400	Scophthalmus_maximus
ENSGACG00000003912	sub1b	100	93.600	ENSSDUG00000013854	sub1b	80	90.076	Seriola_dumerili
ENSGACG00000003912	sub1b	100	93.600	ENSSLDG00000000852	sub1b	100	93.600	Seriola_lalandi_dorsalis
ENSGACG00000003912	sub1b	100	70.635	ENSSPUG00000016817	SUB1	100	71.429	Sphenodon_punctatus
ENSGACG00000003912	sub1b	100	92.800	ENSSPAG00000019363	sub1b	100	92.800	Stegastes_partitus
ENSGACG00000003912	sub1b	100	66.929	ENSSSCG00000040294	-	87	71.654	Sus_scrofa
ENSGACG00000003912	sub1b	100	66.929	ENSSSCG00000032650	-	100	71.654	Sus_scrofa
ENSGACG00000003912	sub1b	100	70.635	ENSTGUG00000001918	SUB1	100	71.429	Taeniopygia_guttata
ENSGACG00000003912	sub1b	100	88.800	ENSTRUG00000024420	sub1b	100	88.800	Takifugu_rubripes
ENSGACG00000003912	sub1b	100	86.400	ENSTNIG00000002700	sub1b	100	86.400	Tetraodon_nigroviridis
ENSGACG00000003912	sub1b	100	66.142	ENSTBEG00000001790	-	100	66.142	Tupaia_belangeri
ENSGACG00000003912	sub1b	99	61.905	ENSTBEG00000015821	-	100	66.667	Tupaia_belangeri
ENSGACG00000003912	sub1b	100	67.717	ENSTBEG00000011247	-	84	67.593	Tupaia_belangeri
ENSGACG00000003912	sub1b	100	66.142	ENSTBEG00000004053	-	100	70.866	Tupaia_belangeri
ENSGACG00000003912	sub1b	100	68.504	ENSTBEG00000012861	-	100	66.929	Tupaia_belangeri
ENSGACG00000003912	sub1b	100	66.142	ENSTBEG00000006504	-	100	70.866	Tupaia_belangeri
ENSGACG00000003912	sub1b	81	71.569	ENSTTRG00000017324	SUB1	99	72.549	Tursiops_truncatus
ENSGACG00000003912	sub1b	100	66.929	ENSUAMG00000000182	SUB1	100	71.654	Ursus_americanus
ENSGACG00000003912	sub1b	100	66.929	ENSUMAG00000013792	SUB1	100	71.654	Ursus_maritimus
ENSGACG00000003912	sub1b	100	62.698	ENSVPAG00000011012	SUB1	100	66.667	Vicugna_pacos
ENSGACG00000003912	sub1b	100	66.929	ENSVVUG00000022166	-	100	71.654	Vulpes_vulpes
ENSGACG00000003912	sub1b	89	61.947	ENSVVUG00000025193	-	95	67.257	Vulpes_vulpes
ENSGACG00000003912	sub1b	100	67.969	ENSXETG00000027218	sub1	100	71.875	Xenopus_tropicalis