EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000003914 (Gene tree)
Gene ID: -
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4027 bases
Position: chrgroupXVII:1381600-1385626
Accession: ZDB-GENE-060519-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005137	Exo_endo_phos	PF03372.23	1.2e-18	1	1
ENSGACP00000005141	Exo_endo_phos	PF03372.23	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005156	-	2285	-	ENSGACP00000005141	592 (aa)	-	G3NII1
ENSGACT00000005152	-	1976	-	ENSGACP00000005137	591 (aa)	-	G3NIH7

Gene Model

Click here to download ENSGACG00000003914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000003914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000003914	pde12	99	56.721	ENSG00000174840	PDE12	99	56.721	Homo_sapiens
ENSGACG00000003914	pde12	100	78.500	ENSAPOG00000018806	pde12	99	78.500	Acanthochromis_polyacanthus
ENSGACG00000003914	pde12	99	54.828	ENSAMEG00000011802	PDE12	100	57.417	Ailuropoda_melanoleuca
ENSGACG00000003914	pde12	100	76.174	ENSACIG00000014918	pde12	100	75.336	Amphilophus_citrinellus
ENSGACG00000003914	pde12	100	79.730	ENSAOCG00000016376	pde12	99	78.885	Amphiprion_ocellaris
ENSGACG00000003914	pde12	100	79.561	ENSAPEG00000000756	pde12	99	78.716	Amphiprion_percula
ENSGACG00000003914	pde12	100	78.378	ENSATEG00000003072	pde12	99	78.873	Anabas_testudineus
ENSGACG00000003914	pde12	97	51.753	ENSACAG00000003067	PDE12	99	52.246	Anolis_carolinensis
ENSGACG00000003914	pde12	99	55.921	ENSANAG00000011815	PDE12	99	56.250	Aotus_nancymaae
ENSGACG00000003914	pde12	100	75.630	ENSACLG00000010127	pde12	100	74.747	Astatotilapia_calliptera
ENSGACG00000003914	pde12	95	64.991	ENSAMXG00000020765	pde12	96	65.052	Astyanax_mexicanus
ENSGACG00000003914	pde12	99	56.770	ENSBTAG00000015563	PDE12	99	56.393	Bos_taurus
ENSGACG00000003914	pde12	99	55.410	ENSCJAG00000019905	PDE12	99	56.066	Callithrix_jacchus
ENSGACG00000003914	pde12	99	53.647	ENSCAFG00000007792	PDE12	99	55.105	Canis_familiaris
ENSGACG00000003914	pde12	99	53.971	ENSCAFG00020006692	PDE12	99	55.429	Canis_lupus_dingo
ENSGACG00000003914	pde12	99	57.190	ENSCHIG00000014202	PDE12	99	56.373	Capra_hircus
ENSGACG00000003914	pde12	99	55.902	ENSTSYG00000025750	PDE12	99	55.902	Carlito_syrichta
ENSGACG00000003914	pde12	99	55.810	ENSCPOG00000001620	PDE12	99	56.465	Cavia_porcellus
ENSGACG00000003914	pde12	99	50.164	ENSCCAG00000031290	PDE12	99	50.164	Cebus_capucinus
ENSGACG00000003914	pde12	99	56.230	ENSCATG00000044539	PDE12	99	56.393	Cercocebus_atys
ENSGACG00000003914	pde12	99	55.049	ENSCLAG00000004864	PDE12	99	57.329	Chinchilla_lanigera
ENSGACG00000003914	pde12	99	56.322	ENSCSAG00000012275	PDE12	99	56.486	Chlorocebus_sabaeus
ENSGACG00000003914	pde12	65	62.887	ENSCHOG00000012173	-	93	62.725	Choloepus_hoffmanni
ENSGACG00000003914	pde12	89	63.488	ENSCHOG00000002188	-	88	63.315	Choloepus_hoffmanni
ENSGACG00000003914	pde12	94	56.514	ENSCPBG00000012353	PDE12	91	57.293	Chrysemys_picta_bellii
ENSGACG00000003914	pde12	92	36.185	ENSCING00000006903	-	100	36.952	Ciona_intestinalis
ENSGACG00000003914	pde12	99	56.557	ENSCANG00000038723	PDE12	99	56.721	Colobus_angolensis_palliatus
ENSGACG00000003914	pde12	98	54.770	ENSCGRG00001021836	Pde12	99	55.648	Cricetulus_griseus_chok1gshd
ENSGACG00000003914	pde12	98	55.259	ENSCGRG00000012319	Pde12	99	55.241	Cricetulus_griseus_crigri
ENSGACG00000003914	pde12	94	73.656	ENSCSEG00000018538	pde12	100	72.760	Cynoglossus_semilaevis
ENSGACG00000003914	pde12	100	62.963	ENSCVAG00000003624	pde12	100	62.963	Cyprinodon_variegatus
ENSGACG00000003914	pde12	96	60.139	ENSDARG00000030964	pde12	96	59.792	Danio_rerio
ENSGACG00000003914	pde12	99	53.635	ENSDNOG00000048413	PDE12	99	54.443	Dasypus_novemcinctus
ENSGACG00000003914	pde12	94	56.920	ENSDORG00000004313	Pde12	99	55.738	Dipodomys_ordii
ENSGACG00000003914	pde12	94	32.933	FBgn0051759	CG31759	99	32.646	Drosophila_melanogaster
ENSGACG00000003914	pde12	72	44.304	ENSEBUG00000004803	pde12	75	44.304	Eptatretus_burgeri
ENSGACG00000003914	pde12	99	56.066	ENSEASG00005000644	PDE12	99	56.393	Equus_asinus_asinus
ENSGACG00000003914	pde12	99	56.066	ENSECAG00000005326	PDE12	99	56.393	Equus_caballus
ENSGACG00000003914	pde12	62	63.006	ENSEEUG00000010406	-	63	62.644	Erinaceus_europaeus
ENSGACG00000003914	pde12	99	63.283	ENSELUG00000014391	pde12	98	63.283	Esox_lucius
ENSGACG00000003914	pde12	99	54.605	ENSFCAG00000031696	PDE12	99	55.172	Felis_catus
ENSGACG00000003914	pde12	81	60.788	ENSFALG00000008401	PDE12	99	60.788	Ficedula_albicollis
ENSGACG00000003914	pde12	99	55.465	ENSFDAG00000021278	PDE12	99	56.230	Fukomys_damarensis
ENSGACG00000003914	pde12	94	75.135	ENSFHEG00000018967	pde12	91	74.286	Fundulus_heteroclitus
ENSGACG00000003914	pde12	95	64.121	ENSGMOG00000018041	pde12	99	64.235	Gadus_morhua
ENSGACG00000003914	pde12	96	57.118	ENSGALG00000052355	PDE12	98	57.045	Gallus_gallus
ENSGACG00000003914	pde12	100	72.466	ENSGAFG00000002045	pde12	99	72.466	Gambusia_affinis
ENSGACG00000003914	pde12	97	56.432	ENSGAGG00000010266	PDE12	93	57.290	Gopherus_agassizii
ENSGACG00000003914	pde12	99	56.557	ENSGGOG00000003312	PDE12	99	56.557	Gorilla_gorilla
ENSGACG00000003914	pde12	100	76.094	ENSHBUG00000023370	pde12	100	75.253	Haplochromis_burtoni
ENSGACG00000003914	pde12	99	55.574	ENSHGLG00000005661	PDE12	99	55.738	Heterocephalus_glaber_female
ENSGACG00000003914	pde12	99	54.754	ENSHGLG00100001136	PDE12	99	55.738	Heterocephalus_glaber_male
ENSGACG00000003914	pde12	100	70.530	ENSHCOG00000013749	pde12	100	70.530	Hippocampus_comes
ENSGACG00000003914	pde12	95	62.589	ENSIPUG00000007123	Pde12	95	62.832	Ictalurus_punctatus
ENSGACG00000003914	pde12	99	54.754	ENSSTOG00000007861	PDE12	99	55.738	Ictidomys_tridecemlineatus
ENSGACG00000003914	pde12	99	54.019	ENSJJAG00000006038	Pde12	99	54.019	Jaculus_jaculus
ENSGACG00000003914	pde12	100	77.872	ENSKMAG00000018523	pde12	99	77.027	Kryptolebias_marmoratus
ENSGACG00000003914	pde12	96	73.565	ENSLBEG00000026775	pde12	100	71.993	Labrus_bergylta
ENSGACG00000003914	pde12	96	79.756	ENSLBEG00000009762	PDE12	100	78.369	Labrus_bergylta
ENSGACG00000003914	pde12	95	60.784	ENSLACG00000015492	PDE12	94	60.784	Latimeria_chalumnae
ENSGACG00000003914	pde12	95	61.032	ENSLOCG00000013277	pde12	94	60.924	Lepisosteus_oculatus
ENSGACG00000003914	pde12	92	57.067	ENSLAFG00000002821	PDE12	100	57.420	Loxodonta_africana
ENSGACG00000003914	pde12	99	56.393	ENSMFAG00000030966	PDE12	99	56.557	Macaca_fascicularis
ENSGACG00000003914	pde12	99	56.393	ENSMMUG00000004052	PDE12	99	56.557	Macaca_mulatta
ENSGACG00000003914	pde12	99	56.393	ENSMNEG00000030068	PDE12	99	56.557	Macaca_nemestrina
ENSGACG00000003914	pde12	99	56.393	ENSMLEG00000036137	PDE12	99	56.557	Mandrillus_leucophaeus
ENSGACG00000003914	pde12	100	79.089	ENSMAMG00000014415	pde12	100	78.246	Mastacembelus_armatus
ENSGACG00000003914	pde12	95	74.291	ENSMZEG00005028202	-	99	73.404	Maylandia_zebra
ENSGACG00000003914	pde12	100	76.094	ENSMZEG00005016132	pde12	100	75.253	Maylandia_zebra
ENSGACG00000003914	pde12	54	64.062	ENSMGAG00000006449	PDE12	99	63.863	Meleagris_gallopavo
ENSGACG00000003914	pde12	94	55.556	ENSMAUG00000000442	Pde12	99	54.392	Mesocricetus_auratus
ENSGACG00000003914	pde12	99	55.791	ENSMICG00000005723	PDE12	99	55.410	Microcebus_murinus
ENSGACG00000003914	pde12	99	55.058	ENSMOCG00000020734	Pde12	99	56.385	Microtus_ochrogaster
ENSGACG00000003914	pde12	96	80.351	ENSMMOG00000013636	pde12	100	78.752	Mola_mola
ENSGACG00000003914	pde12	95	55.268	ENSMODG00000000155	PDE12	97	56.131	Monodelphis_domestica
ENSGACG00000003914	pde12	100	75.717	ENSMALG00000022647	pde12	100	75.717	Monopterus_albus
ENSGACG00000003914	pde12	99	56.402	MGP_CAROLIEiJ_G0019032	Pde12	99	55.410	Mus_caroli
ENSGACG00000003914	pde12	99	56.564	ENSMUSG00000043702	Pde12	99	55.574	Mus_musculus
ENSGACG00000003914	pde12	99	56.678	MGP_PahariEiJ_G0030049	Pde12	99	55.537	Mus_pahari
ENSGACG00000003914	pde12	99	56.564	MGP_SPRETEiJ_G0019916	Pde12	99	55.574	Mus_spretus
ENSGACG00000003914	pde12	99	53.934	ENSMPUG00000016869	PDE12	99	55.246	Mustela_putorius_furo
ENSGACG00000003914	pde12	99	55.646	ENSMLUG00000026487	PDE12	99	55.902	Myotis_lucifugus
ENSGACG00000003914	pde12	99	55.848	ENSNGAG00000001228	Pde12	99	55.848	Nannospalax_galili
ENSGACG00000003914	pde12	99	69.426	ENSNBRG00000015769	pde12	69	68.412	Neolamprologus_brichardi
ENSGACG00000003914	pde12	99	56.557	ENSNLEG00000007269	-	99	56.557	Nomascus_leucogenys
ENSGACG00000003914	pde12	99	52.883	ENSNLEG00000034833	-	99	53.058	Nomascus_leucogenys
ENSGACG00000003914	pde12	93	56.452	ENSMEUG00000006786	PDE12	99	55.051	Notamacropus_eugenii
ENSGACG00000003914	pde12	99	55.302	ENSOPRG00000015273	PDE12	99	56.117	Ochotona_princeps
ENSGACG00000003914	pde12	94	56.944	ENSODEG00000006268	PDE12	99	56.557	Octodon_degus
ENSGACG00000003914	pde12	94	77.957	ENSONIG00000004293	pde12	100	77.061	Oreochromis_niloticus
ENSGACG00000003914	pde12	90	52.857	ENSOANG00000012885	PDE12	99	54.891	Ornithorhynchus_anatinus
ENSGACG00000003914	pde12	99	56.301	ENSOCUG00000000823	PDE12	99	56.628	Oryctolagus_cuniculus
ENSGACG00000003914	pde12	100	72.727	ENSORLG00000017444	pde12	100	72.054	Oryzias_latipes
ENSGACG00000003914	pde12	100	72.391	ENSORLG00020010469	pde12	100	71.717	Oryzias_latipes_hni
ENSGACG00000003914	pde12	100	72.896	ENSORLG00015004093	pde12	100	72.222	Oryzias_latipes_hsok
ENSGACG00000003914	pde12	100	71.332	ENSOMEG00000020900	pde12	100	70.995	Oryzias_melastigma
ENSGACG00000003914	pde12	99	56.117	ENSOGAG00000024093	PDE12	99	55.738	Otolemur_garnettii
ENSGACG00000003914	pde12	90	57.477	ENSOARG00000013642	PDE12	100	57.734	Ovis_aries
ENSGACG00000003914	pde12	99	56.230	ENSPPAG00000034712	PDE12	99	56.230	Pan_paniscus
ENSGACG00000003914	pde12	99	55.428	ENSPPRG00000011738	PDE12	99	55.337	Panthera_pardus
ENSGACG00000003914	pde12	83	56.917	ENSPTIG00000019166	PDE12	96	56.917	Panthera_tigris_altaica
ENSGACG00000003914	pde12	99	56.393	ENSPTRG00000030221	PDE12	99	56.393	Pan_troglodytes
ENSGACG00000003914	pde12	99	56.230	ENSPANG00000007324	PDE12	99	56.393	Papio_anubis
ENSGACG00000003914	pde12	94	63.620	ENSPKIG00000025354	pde12	94	63.129	Paramormyrops_kingsleyae
ENSGACG00000003914	pde12	95	57.268	ENSPSIG00000004926	PDE12	92	57.793	Pelodiscus_sinensis
ENSGACG00000003914	pde12	100	63.176	ENSPMGG00000006742	pde12	97	65.832	Periophthalmus_magnuspinnatus
ENSGACG00000003914	pde12	85	60.235	ENSPEMG00000007259	Pde12	95	60.235	Peromyscus_maniculatus_bairdii
ENSGACG00000003914	pde12	100	73.746	ENSPFOG00000011864	pde12	99	73.746	Poecilia_formosa
ENSGACG00000003914	pde12	73	79.167	ENSPLAG00000023871	pde12	80	79.167	Poecilia_latipinna
ENSGACG00000003914	pde12	100	74.493	ENSPMEG00000005674	pde12	99	74.493	Poecilia_mexicana
ENSGACG00000003914	pde12	100	74.493	ENSPREG00000022831	pde12	99	74.493	Poecilia_reticulata
ENSGACG00000003914	pde12	99	56.814	ENSPPYG00000013769	PDE12	99	56.979	Pongo_abelii
ENSGACG00000003914	pde12	99	55.246	ENSPCOG00000026004	PDE12	99	55.738	Propithecus_coquereli
ENSGACG00000003914	pde12	99	55.868	ENSPVAG00000008885	PDE12	99	55.776	Pteropus_vampyrus
ENSGACG00000003914	pde12	100	75.926	ENSPNYG00000013258	pde12	100	75.084	Pundamilia_nyererei
ENSGACG00000003914	pde12	95	66.667	ENSPNAG00000029032	pde12	96	65.961	Pygocentrus_nattereri
ENSGACG00000003914	pde12	99	55.340	ENSRNOG00000059442	Pde12	99	55.082	Rattus_norvegicus
ENSGACG00000003914	pde12	99	56.393	ENSRBIG00000040704	PDE12	99	56.557	Rhinopithecus_bieti
ENSGACG00000003914	pde12	99	56.393	ENSRROG00000031279	PDE12	99	56.557	Rhinopithecus_roxellana
ENSGACG00000003914	pde12	99	54.770	ENSSBOG00000023974	PDE12	99	55.757	Saimiri_boliviensis_boliviensis
ENSGACG00000003914	pde12	84	66.667	ENSSFOG00015003468	pde12	91	66.667	Scleropages_formosus
ENSGACG00000003914	pde12	94	76.678	ENSSMAG00000003258	pde12	95	76.937	Scophthalmus_maximus
ENSGACG00000003914	pde12	100	81.450	ENSSDUG00000020470	pde12	100	80.776	Seriola_dumerili
ENSGACG00000003914	pde12	100	79.595	ENSSLDG00000019833	pde12	100	78.921	Seriola_lalandi_dorsalis
ENSGACG00000003914	pde12	99	55.702	ENSSARG00000007201	PDE12	99	55.776	Sorex_araneus
ENSGACG00000003914	pde12	97	77.913	ENSSPAG00000014980	pde12	99	76.351	Stegastes_partitus
ENSGACG00000003914	pde12	99	56.322	ENSSSCG00000011465	-	99	56.557	Sus_scrofa
ENSGACG00000003914	pde12	54	56.250	ENSSSCG00000034476	-	74	56.250	Sus_scrofa
ENSGACG00000003914	pde12	63	63.612	ENSTGUG00000007290	PDE12	100	63.612	Taeniopygia_guttata
ENSGACG00000003914	pde12	100	73.142	ENSTRUG00000005159	pde12	99	73.220	Takifugu_rubripes
ENSGACG00000003914	pde12	99	72.420	ENSTNIG00000017497	pde12	99	71.912	Tetraodon_nigroviridis
ENSGACG00000003914	pde12	77	64.169	ENSTBEG00000008202	PDE12	78	64.169	Tupaia_belangeri
ENSGACG00000003914	pde12	99	56.230	ENSTTRG00000014707	PDE12	99	56.557	Tursiops_truncatus
ENSGACG00000003914	pde12	99	54.918	ENSUAMG00000020634	-	99	56.066	Ursus_americanus
ENSGACG00000003914	pde12	74	48.775	ENSUAMG00000008368	-	98	49.220	Ursus_americanus
ENSGACG00000003914	pde12	73	59.361	ENSUMAG00000021906	PDE12	100	59.453	Ursus_maritimus
ENSGACG00000003914	pde12	94	56.304	ENSVVUG00000020335	PDE12	93	57.216	Vulpes_vulpes
ENSGACG00000003914	pde12	94	50.626	ENSXETG00000008653	pde12	97	50.179	Xenopus_tropicalis
ENSGACG00000003914	pde12	97	75.087	ENSXCOG00000000407	pde12	99	75.087	Xiphophorus_couchianus
ENSGACG00000003914	pde12	100	74.831	ENSXMAG00000013370	pde12	100	74.831	Xiphophorus_maculatus