EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000004202 (Gene tree)
Gene ID: -
Gene Symbol: rbm12
Alias: zgc:193560|zgc:193570
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3413 bases
Position: chrgroupXVII:1717973-1721385
Accession: ZDB-GENE-081022-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005529	RRM_1	PF00076.22	8e-34	1	4
ENSGACP00000005529	RRM_1	PF00076.22	8e-34	2	4
ENSGACP00000005529	RRM_1	PF00076.22	8e-34	3	4
ENSGACP00000005529	RRM_1	PF00076.22	8e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005545	-	2769	-	ENSGACP00000005529	922 (aa)	-	G3NJL7

Gene Model

Click here to download ENSGACG00000004202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000004202	rbm12	68	58.772	ENSGACG00000008682	rbm12b	99	69.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004202	rbm12	98	85.604	ENSACIG00000011053	rbm12	100	86.615	Amphilophus_citrinellus
ENSGACG00000004202	rbm12	98	87.375	ENSAOCG00000019579	rbm12	100	87.154	Amphiprion_ocellaris
ENSGACG00000004202	rbm12	98	58.911	ENSDARG00000100636	rbm12	100	57.508	Danio_rerio
ENSGACG00000004202	rbm12	54	71.667	ENSEBUG00000016806	rbm12	84	71.667	Eptatretus_burgeri
ENSGACG00000004202	rbm12	98	45.919	ENSFALG00000012516	RBM12	100	45.955	Ficedula_albicollis
ENSGACG00000004202	rbm12	98	59.597	ENSIPUG00000014491	rbm12	100	59.023	Ictalurus_punctatus
ENSGACG00000004202	rbm12	51	68.235	ENSJJAG00000009879	-	83	56.250	Jaculus_jaculus
ENSGACG00000004202	rbm12	73	55.780	ENSLOCG00000018363	rbm12	100	56.536	Lepisosteus_oculatus
ENSGACG00000004202	rbm12	65	82.014	ENSMAMG00000001497	rbm12	97	89.655	Mastacembelus_armatus
ENSGACG00000004202	rbm12	98	82.151	ENSMMOG00000013495	rbm12	100	82.483	Mola_mola
ENSGACG00000004202	rbm12	51	83.654	ENSMALG00000022679	rbm12	100	84.590	Monopterus_albus
ENSGACG00000004202	rbm12	98	79.011	ENSOMEG00000008238	rbm12	100	79.231	Oryzias_melastigma
ENSGACG00000004202	rbm12	54	93.617	ENSPMGG00000018816	rbm12	96	93.617	Periophthalmus_magnuspinnatus
ENSGACG00000004202	rbm12	98	78.366	ENSXCOG00000014073	rbm12	99	78.918	Xiphophorus_couchianus