EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000004257 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3183 bases
Position: chrgroupVIII:2375426-2378608
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005607	zf-C2H2	PF00096.26	3e-27	1	5
ENSGACP00000005607	zf-C2H2	PF00096.26	3e-27	2	5
ENSGACP00000005607	zf-C2H2	PF00096.26	3e-27	3	5
ENSGACP00000005607	zf-C2H2	PF00096.26	3e-27	4	5
ENSGACP00000005607	zf-C2H2	PF00096.26	3e-27	5	5
ENSGACP00000005607	zf-met	PF12874.7	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005623	-	1781	-	ENSGACP00000005607	396 (aa)	-	G3NJU5

Gene Model

Click here to download ENSGACG00000004257's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004257's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000004257	gfi1ab	55	48.214	ENSGACG00000013652	-	100	49.080
ENSGACG00000004257	gfi1ab	52	46.358	ENSGACG00000001358	-	99	46.358
ENSGACG00000004257	gfi1ab	50	41.667	ENSGACG00000018415	-	99	41.667
ENSGACG00000004257	gfi1ab	64	34.756	ENSGACG00000020205	PRDM15	52	34.756
ENSGACG00000004257	gfi1ab	55	46.746	ENSGACG00000010393	-	100	46.746
ENSGACG00000004257	gfi1ab	50	40.351	ENSGACG00000010051	-	82	46.479
ENSGACG00000004257	gfi1ab	51	46.591	ENSGACG00000005553	znf236	99	38.690
ENSGACG00000004257	gfi1ab	97	52.196	ENSGACG00000018134	gfi1b	100	51.680
ENSGACG00000004257	gfi1ab	52	40.000	ENSGACG00000012415	GZF1	100	41.818
ENSGACG00000004257	gfi1ab	52	30.894	ENSGACG00000014840	maza	87	32.500
ENSGACG00000004257	gfi1ab	97	59.900	ENSGACG00000015674	gfi1aa	100	60.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004257	gfi1ab	97	62.824	ENSG00000162676	GFI1	100	63.593	Homo_sapiens
ENSGACG00000004257	gfi1ab	97	85.969	ENSAPOG00000015189	gfi1ab	100	85.714	Acanthochromis_polyacanthus
ENSGACG00000004257	gfi1ab	97	85.233	ENSACIG00000016354	gfi1ab	100	84.974	Amphilophus_citrinellus
ENSGACG00000004257	gfi1ab	97	76.350	ENSAOCG00000008339	gfi1ab	100	74.550	Amphiprion_ocellaris
ENSGACG00000004257	gfi1ab	97	86.224	ENSAPEG00000023870	gfi1ab	100	85.969	Amphiprion_percula
ENSGACG00000004257	gfi1ab	97	81.039	ENSATEG00000009167	gfi1ab	89	80.779	Anabas_testudineus
ENSGACG00000004257	gfi1ab	83	65.130	ENSAPLG00000015700	GFI1	99	65.130	Anas_platyrhynchos
ENSGACG00000004257	gfi1ab	97	62.808	ENSACAG00000004498	GFI1	100	63.054	Anolis_carolinensis
ENSGACG00000004257	gfi1ab	97	63.208	ENSANAG00000019656	GFI1	100	63.208	Aotus_nancymaae
ENSGACG00000004257	gfi1ab	97	86.632	ENSACLG00000026458	gfi1ab	93	86.375	Astatotilapia_calliptera
ENSGACG00000004257	gfi1ab	97	52.685	ENSAMXG00000006669	GFI1	86	63.475	Astyanax_mexicanus
ENSGACG00000004257	gfi1ab	56	54.751	ENSAMXG00000015228	-	69	54.751	Astyanax_mexicanus
ENSGACG00000004257	gfi1ab	97	65.823	ENSAMXG00000039600	gfi1ab	100	65.570	Astyanax_mexicanus
ENSGACG00000004257	gfi1ab	97	62.322	ENSBTAG00000016723	GFI1	100	62.736	Bos_taurus
ENSGACG00000004257	gfi1ab	97	62.500	ENSCJAG00000017609	GFI1	100	62.972	Callithrix_jacchus
ENSGACG00000004257	gfi1ab	97	62.648	ENSCAFG00000020155	GFI1	100	62.175	Canis_familiaris
ENSGACG00000004257	gfi1ab	98	62.441	ENSCAFG00020013371	GFI1	89	61.972	Canis_lupus_dingo
ENSGACG00000004257	gfi1ab	97	62.233	ENSCHIG00000016135	GFI1	100	62.648	Capra_hircus
ENSGACG00000004257	gfi1ab	97	62.617	ENSCPOG00000011727	GFI1	100	62.911	Cavia_porcellus
ENSGACG00000004257	gfi1ab	97	62.500	ENSCCAG00000036072	GFI1	100	62.500	Cebus_capucinus
ENSGACG00000004257	gfi1ab	97	63.146	ENSCATG00000037873	GFI1	100	63.915	Cercocebus_atys
ENSGACG00000004257	gfi1ab	97	66.667	ENSCLAG00000005915	GFI1	100	61.327	Chinchilla_lanigera
ENSGACG00000004257	gfi1ab	95	58.152	ENSCSAG00000001469	GFI1	100	59.016	Chlorocebus_sabaeus
ENSGACG00000004257	gfi1ab	97	62.911	ENSCANG00000034077	GFI1	100	63.679	Colobus_angolensis_palliatus
ENSGACG00000004257	gfi1ab	97	62.061	ENSCGRG00001015432	Gfi1	100	62.824	Cricetulus_griseus_chok1gshd
ENSGACG00000004257	gfi1ab	97	62.312	ENSCSEG00000017729	GFI1	100	62.312	Cynoglossus_semilaevis
ENSGACG00000004257	gfi1ab	97	78.608	ENSCVAG00000011828	gfi1ab	100	78.351	Cyprinodon_variegatus
ENSGACG00000004257	gfi1ab	97	60.750	ENSCVAG00000004930	GFI1	100	61.443	Cyprinodon_variegatus
ENSGACG00000004257	gfi1ab	97	70.677	ENSDARG00000044457	gfi1ab	100	70.677	Danio_rerio
ENSGACG00000004257	gfi1ab	97	61.972	ENSDNOG00000000782	GFI1	97	62.441	Dasypus_novemcinctus
ENSGACG00000004257	gfi1ab	100	62.181	ENSEASG00005015509	GFI1	89	63.109	Equus_asinus_asinus
ENSGACG00000004257	gfi1ab	95	54.822	ENSECAG00000006647	GFI1	92	56.443	Equus_caballus
ENSGACG00000004257	gfi1ab	97	62.708	ENSEEUG00000000198	GFI1	100	63.007	Erinaceus_europaeus
ENSGACG00000004257	gfi1ab	97	73.317	ENSELUG00000003015	gfi1ab	99	73.067	Esox_lucius
ENSGACG00000004257	gfi1ab	97	61.500	ENSELUG00000019033	GFI1	100	61.290	Esox_lucius
ENSGACG00000004257	gfi1ab	97	63.059	ENSFCAG00000005914	GFI1	100	63.121	Felis_catus
ENSGACG00000004257	gfi1ab	97	80.206	ENSFHEG00000010997	gfi1ab	100	79.949	Fundulus_heteroclitus
ENSGACG00000004257	gfi1ab	97	60.539	ENSFHEG00000000341	GFI1	100	62.189	Fundulus_heteroclitus
ENSGACG00000004257	gfi1ab	97	75.192	ENSGMOG00000007737	gfi1ab	100	75.192	Gadus_morhua
ENSGACG00000004257	gfi1ab	97	63.814	ENSGALG00000043650	GFI1	100	64.059	Gallus_gallus
ENSGACG00000004257	gfi1ab	97	59.804	ENSGAFG00000018063	GFI1	100	61.029	Gambusia_affinis
ENSGACG00000004257	gfi1ab	97	81.586	ENSGAFG00000016637	gfi1ab	100	81.330	Gambusia_affinis
ENSGACG00000004257	gfi1ab	97	62.824	ENSGGOG00000005320	GFI1	100	63.593	Gorilla_gorilla
ENSGACG00000004257	gfi1ab	97	85.492	ENSHBUG00000011969	gfi1ab	100	85.233	Haplochromis_burtoni
ENSGACG00000004257	gfi1ab	99	61.916	ENSHGLG00000008020	GFI1	100	63.658	Heterocephalus_glaber_female
ENSGACG00000004257	gfi1ab	99	61.916	ENSHGLG00100000610	GFI1	100	63.658	Heterocephalus_glaber_male
ENSGACG00000004257	gfi1ab	97	64.407	ENSHCOG00000019555	GFI1	100	60.000	Hippocampus_comes
ENSGACG00000004257	gfi1ab	97	62.560	ENSHCOG00000008590	gfi1ab	100	62.319	Hippocampus_comes
ENSGACG00000004257	gfi1ab	97	66.835	ENSIPUG00000010071	gfi1ab	87	66.835	Ictalurus_punctatus
ENSGACG00000004257	gfi1ab	97	61.347	ENSIPUG00000013414	GFI1	100	61.347	Ictalurus_punctatus
ENSGACG00000004257	gfi1ab	97	63.615	ENSSTOG00000014583	GFI1	100	63.915	Ictidomys_tridecemlineatus
ENSGACG00000004257	gfi1ab	97	80.052	ENSKMAG00000003810	gfi1ab	100	79.793	Kryptolebias_marmoratus
ENSGACG00000004257	gfi1ab	97	85.128	ENSLBEG00000027776	gfi1ab	100	84.872	Labrus_bergylta
ENSGACG00000004257	gfi1ab	97	68.395	ENSLACG00000013362	GFI1	98	68.395	Latimeria_chalumnae
ENSGACG00000004257	gfi1ab	96	44.819	ENSLACG00000017590	-	99	46.234	Latimeria_chalumnae
ENSGACG00000004257	gfi1ab	97	70.677	ENSLOCG00000004711	gfi1ab	100	70.677	Lepisosteus_oculatus
ENSGACG00000004257	gfi1ab	97	62.110	ENSLAFG00000018346	GFI1	100	62.439	Loxodonta_africana
ENSGACG00000004257	gfi1ab	97	63.146	ENSMFAG00000045801	GFI1	100	63.915	Macaca_fascicularis
ENSGACG00000004257	gfi1ab	97	63.146	ENSMNEG00000036338	GFI1	100	63.915	Macaca_nemestrina
ENSGACG00000004257	gfi1ab	97	63.146	ENSMLEG00000036181	GFI1	100	63.915	Mandrillus_leucophaeus
ENSGACG00000004257	gfi1ab	97	87.013	ENSMAMG00000008125	gfi1ab	100	86.753	Mastacembelus_armatus
ENSGACG00000004257	gfi1ab	97	86.305	ENSMZEG00005009895	gfi1ab	100	86.047	Maylandia_zebra
ENSGACG00000004257	gfi1ab	83	65.607	ENSMGAG00000008187	GFI1	99	65.607	Meleagris_gallopavo
ENSGACG00000004257	gfi1ab	97	62.411	ENSMICG00000047208	GFI1	100	61.702	Microcebus_murinus
ENSGACG00000004257	gfi1ab	97	73.980	ENSMMOG00000005556	gfi1ab	100	73.724	Mola_mola
ENSGACG00000004257	gfi1ab	97	61.111	ENSMODG00000011802	GFI1	100	62.353	Monodelphis_domestica
ENSGACG00000004257	gfi1ab	97	82.078	ENSMALG00000014672	gfi1ab	100	81.818	Monopterus_albus
ENSGACG00000004257	gfi1ab	97	62.118	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSGACG00000004257	gfi1ab	97	61.647	ENSMUSG00000029275	Gfi1	100	61.647	Mus_musculus
ENSGACG00000004257	gfi1ab	97	61.882	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSGACG00000004257	gfi1ab	97	61.882	MGP_SPRETEiJ_G0028507	Gfi1	100	61.882	Mus_spretus
ENSGACG00000004257	gfi1ab	99	64.925	ENSMPUG00000004178	GFI1	99	64.925	Mustela_putorius_furo
ENSGACG00000004257	gfi1ab	98	62.150	ENSMLUG00000015191	GFI1	98	61.916	Myotis_lucifugus
ENSGACG00000004257	gfi1ab	97	84.184	ENSNBRG00000015774	gfi1ab	100	83.929	Neolamprologus_brichardi
ENSGACG00000004257	gfi1ab	83	64.595	ENSNLEG00000010470	GFI1	91	65.489	Nomascus_leucogenys
ENSGACG00000004257	gfi1ab	97	63.294	ENSOPRG00000001473	GFI1	100	64.000	Ochotona_princeps
ENSGACG00000004257	gfi1ab	97	86.563	ENSONIG00000019246	gfi1ab	100	86.305	Oreochromis_niloticus
ENSGACG00000004257	gfi1ab	95	57.182	ENSOCUG00000023553	GFI1	93	57.182	Oryctolagus_cuniculus
ENSGACG00000004257	gfi1ab	97	78.238	ENSORLG00000013806	gfi1ab	100	77.979	Oryzias_latipes
ENSGACG00000004257	gfi1ab	97	61.558	ENSORLG00000005060	GFI1	100	62.060	Oryzias_latipes
ENSGACG00000004257	gfi1ab	97	78.238	ENSORLG00020001602	gfi1ab	100	77.979	Oryzias_latipes_hni
ENSGACG00000004257	gfi1ab	97	58.270	ENSORLG00020002817	GFI1	100	58.270	Oryzias_latipes_hni
ENSGACG00000004257	gfi1ab	97	61.055	ENSORLG00015006070	GFI1	100	61.558	Oryzias_latipes_hsok
ENSGACG00000004257	gfi1ab	97	62.720	ENSOMEG00000016722	GFI1	100	62.720	Oryzias_melastigma
ENSGACG00000004257	gfi1ab	97	66.150	ENSOGAG00000027913	GFI1	100	66.150	Otolemur_garnettii
ENSGACG00000004257	gfi1ab	97	66.321	ENSPPAG00000042186	GFI1	100	66.321	Pan_paniscus
ENSGACG00000004257	gfi1ab	97	63.059	ENSPPRG00000007521	GFI1	100	63.121	Panthera_pardus
ENSGACG00000004257	gfi1ab	97	62.588	ENSPTRG00000043053	GFI1	100	63.357	Pan_troglodytes
ENSGACG00000004257	gfi1ab	97	63.146	ENSPANG00000016433	GFI1	100	63.915	Papio_anubis
ENSGACG00000004257	gfi1ab	97	72.319	ENSPKIG00000004263	GFI1	100	72.070	Paramormyrops_kingsleyae
ENSGACG00000004257	gfi1ab	83	66.087	ENSPSIG00000008734	GFI1	96	66.087	Pelodiscus_sinensis
ENSGACG00000004257	gfi1ab	97	77.778	ENSPMGG00000012546	gfi1ab	100	77.778	Periophthalmus_magnuspinnatus
ENSGACG00000004257	gfi1ab	56	89.595	ENSPMGG00000011041	GFI1	70	89.595	Periophthalmus_magnuspinnatus
ENSGACG00000004257	gfi1ab	97	64.066	ENSPCIG00000013728	GFI1	100	64.593	Phascolarctos_cinereus
ENSGACG00000004257	gfi1ab	97	81.330	ENSPFOG00000023214	gfi1ab	100	81.074	Poecilia_formosa
ENSGACG00000004257	gfi1ab	97	62.255	ENSPLAG00000005376	GFI1	91	62.255	Poecilia_latipinna
ENSGACG00000004257	gfi1ab	97	81.330	ENSPLAG00000010879	gfi1ab	100	81.074	Poecilia_latipinna
ENSGACG00000004257	gfi1ab	97	81.586	ENSPMEG00000013694	gfi1ab	100	81.330	Poecilia_mexicana
ENSGACG00000004257	gfi1ab	97	62.624	ENSPMEG00000019299	GFI1	100	62.624	Poecilia_mexicana
ENSGACG00000004257	gfi1ab	97	56.812	ENSPREG00000007997	GFI1	100	55.076	Poecilia_reticulata
ENSGACG00000004257	gfi1ab	97	81.491	ENSPREG00000014097	gfi1ab	100	81.234	Poecilia_reticulata
ENSGACG00000004257	gfi1ab	97	51.408	ENSPCAG00000011020	GFI1	100	51.408	Procavia_capensis
ENSGACG00000004257	gfi1ab	97	62.588	ENSPCOG00000020540	GFI1	100	62.411	Propithecus_coquereli
ENSGACG00000004257	gfi1ab	97	62.736	ENSPVAG00000006928	GFI1	100	63.333	Pteropus_vampyrus
ENSGACG00000004257	gfi1ab	97	86.563	ENSPNYG00000021183	gfi1ab	100	86.305	Pundamilia_nyererei
ENSGACG00000004257	gfi1ab	97	63.277	ENSPNAG00000014299	-	98	63.277	Pygocentrus_nattereri
ENSGACG00000004257	gfi1ab	97	66.921	ENSPNAG00000027258	gfi1ab	100	66.667	Pygocentrus_nattereri
ENSGACG00000004257	gfi1ab	97	57.072	ENSPNAG00000028014	GFI1	100	58.122	Pygocentrus_nattereri
ENSGACG00000004257	gfi1ab	97	62.118	ENSRNOG00000002042	Gfi1	100	62.118	Rattus_norvegicus
ENSGACG00000004257	gfi1ab	97	63.146	ENSRBIG00000036467	GFI1	100	64.151	Rhinopithecus_bieti
ENSGACG00000004257	gfi1ab	97	63.146	ENSRROG00000031687	GFI1	100	64.151	Rhinopithecus_roxellana
ENSGACG00000004257	gfi1ab	97	62.972	ENSSBOG00000031300	GFI1	100	63.146	Saimiri_boliviensis_boliviensis
ENSGACG00000004257	gfi1ab	97	73.067	ENSSFOG00015020295	gfi1	100	72.727	Scleropages_formosus
ENSGACG00000004257	gfi1ab	97	81.748	ENSSMAG00000002782	gfi1ab	100	81.491	Scophthalmus_maximus
ENSGACG00000004257	gfi1ab	97	84.896	ENSSDUG00000022410	gfi1ab	100	84.896	Seriola_dumerili
ENSGACG00000004257	gfi1ab	97	84.635	ENSSLDG00000020163	gfi1ab	100	84.635	Seriola_lalandi_dorsalis
ENSGACG00000004257	gfi1ab	97	86.786	ENSSPAG00000009140	gfi1ab	100	90.909	Stegastes_partitus
ENSGACG00000004257	gfi1ab	97	63.723	ENSSSCG00000006902	GFI1	100	64.508	Sus_scrofa
ENSGACG00000004257	gfi1ab	84	66.571	ENSTGUG00000006060	GFI1	100	66.571	Taeniopygia_guttata
ENSGACG00000004257	gfi1ab	97	79.381	ENSTRUG00000000415	gfi1ab	100	79.124	Takifugu_rubripes
ENSGACG00000004257	gfi1ab	98	74.745	ENSTNIG00000000651	gfi1ab	98	72.959	Tetraodon_nigroviridis
ENSGACG00000004257	gfi1ab	97	64.692	ENSTTRG00000000082	GFI1	100	64.762	Tursiops_truncatus
ENSGACG00000004257	gfi1ab	97	64.059	ENSUAMG00000021124	GFI1	91	64.059	Ursus_americanus
ENSGACG00000004257	gfi1ab	97	65.394	ENSXETG00000023006	gfi1	98	65.394	Xenopus_tropicalis
ENSGACG00000004257	gfi1ab	97	81.491	ENSXMAG00000010523	gfi1ab	100	81.234	Xiphophorus_maculatus
ENSGACG00000004257	gfi1ab	83	53.693	ENSXMAG00000009274	GFI1	70	54.958	Xiphophorus_maculatus