EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004276 (Gene tree)
Gene ID: -
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex%2C subunit 4a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 5488 bases
Position: chrgroupXIX:6011659-6017146
Accession: ZDB-GENE-090313-262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005666	RRM_1	PF00076.22	5.6e-05	1	1
ENSGACP00000005660	RRM_1	PF00076.22	5.7e-05	1	1
ENSGACP00000005659	RRM_1	PF00076.22	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005682	-	2178	-	ENSGACP00000005666	725 (aa)	-	G3NK04
ENSGACT00000005675	-	2412	-	ENSGACP00000005659	803 (aa)	-	G3NJZ7
ENSGACT00000005676	-	2205	-	ENSGACP00000005660	734 (aa)	-	G3NJZ8

Gene Model

Click here to download ENSGACG00000004276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004276	cnot4a	91	90.189	ENSG00000080802	CNOT4	97	82.506	Homo_sapiens
ENSGACG00000004276	cnot4a	94	98.889	ENSAPOG00000016272	cnot4a	98	98.889	Acanthochromis_polyacanthus
ENSGACG00000004276	cnot4a	93	86.486	ENSAMEG00000012081	CNOT4	92	86.486	Ailuropoda_melanoleuca
ENSGACG00000004276	cnot4a	100	98.889	ENSACIG00000003011	cnot4a	100	91.667	Amphilophus_citrinellus
ENSGACG00000004276	cnot4a	100	98.519	ENSAOCG00000010792	cnot4a	100	98.519	Amphiprion_ocellaris
ENSGACG00000004276	cnot4a	100	98.519	ENSAPEG00000004680	cnot4a	100	98.519	Amphiprion_percula
ENSGACG00000004276	cnot4a	100	98.519	ENSATEG00000017580	cnot4a	100	98.519	Anabas_testudineus
ENSGACG00000004276	cnot4a	100	68.098	ENSAPLG00000016441	CNOT4	100	67.975	Anas_platyrhynchos
ENSGACG00000004276	cnot4a	100	67.975	ENSACAG00000011154	CNOT4	100	67.853	Anolis_carolinensis
ENSGACG00000004276	cnot4a	91	90.189	ENSANAG00000032156	CNOT4	99	81.250	Aotus_nancymaae
ENSGACG00000004276	cnot4a	100	98.889	ENSACLG00000002514	cnot4a	100	98.889	Astatotilapia_calliptera
ENSGACG00000004276	cnot4a	91	95.185	ENSAMXG00000001373	cnot4a	100	95.185	Astyanax_mexicanus
ENSGACG00000004276	cnot4a	100	91.513	ENSAMXG00000011473	cnot4b	100	91.481	Astyanax_mexicanus
ENSGACG00000004276	cnot4a	100	71.084	ENSBTAG00000017919	CNOT4	100	72.743	Bos_taurus
ENSGACG00000004276	cnot4a	91	90.189	ENSCJAG00000012532	CNOT4	99	81.250	Callithrix_jacchus
ENSGACG00000004276	cnot4a	91	90.189	ENSCAFG00000003223	CNOT4	100	72.913	Canis_familiaris
ENSGACG00000004276	cnot4a	90	90.189	ENSCAFG00020000093	CNOT4	100	73.459	Canis_lupus_dingo
ENSGACG00000004276	cnot4a	90	90.189	ENSCHIG00000010955	CNOT4	100	73.459	Capra_hircus
ENSGACG00000004276	cnot4a	91	90.189	ENSTSYG00000000893	CNOT4	99	80.920	Carlito_syrichta
ENSGACG00000004276	cnot4a	91	89.811	ENSCAPG00000006213	CNOT4	99	89.811	Cavia_aperea
ENSGACG00000004276	cnot4a	100	71.102	ENSCPOG00000011526	CNOT4	100	72.572	Cavia_porcellus
ENSGACG00000004276	cnot4a	100	70.950	ENSCCAG00000024414	CNOT4	94	93.886	Cebus_capucinus
ENSGACG00000004276	cnot4a	100	70.683	ENSCATG00000022607	CNOT4	97	82.270	Cercocebus_atys
ENSGACG00000004276	cnot4a	100	71.102	ENSCLAG00000001857	CNOT4	100	73.116	Chinchilla_lanigera
ENSGACG00000004276	cnot4a	91	90.189	ENSCSAG00000009096	CNOT4	100	71.046	Chlorocebus_sabaeus
ENSGACG00000004276	cnot4a	67	93.048	ENSCHOG00000010412	CNOT4	67	93.048	Choloepus_hoffmanni
ENSGACG00000004276	cnot4a	100	71.352	ENSCPBG00000004959	CNOT4	100	71.084	Chrysemys_picta_bellii
ENSGACG00000004276	cnot4a	62	68.293	ENSCING00000004364	-	61	68.293	Ciona_intestinalis
ENSGACG00000004276	cnot4a	100	70.549	ENSCANG00000029319	CNOT4	97	82.270	Colobus_angolensis_palliatus
ENSGACG00000004276	cnot4a	91	90.189	ENSCGRG00001014651	Cnot4	99	90.189	Cricetulus_griseus_chok1gshd
ENSGACG00000004276	cnot4a	91	90.189	ENSCGRG00000005727	Cnot4	99	90.189	Cricetulus_griseus_crigri
ENSGACG00000004276	cnot4a	95	98.889	ENSCSEG00000015080	cnot4a	94	98.889	Cynoglossus_semilaevis
ENSGACG00000004276	cnot4a	100	97.778	ENSCVAG00000009399	cnot4a	100	97.070	Cyprinodon_variegatus
ENSGACG00000004276	cnot4a	100	91.513	ENSDARG00000007639	cnot4b	92	91.513	Danio_rerio
ENSGACG00000004276	cnot4a	100	88.514	ENSDARG00000007045	cnot4a	100	77.463	Danio_rerio
ENSGACG00000004276	cnot4a	100	70.777	ENSDNOG00000009409	CNOT4	100	71.448	Dasypus_novemcinctus
ENSGACG00000004276	cnot4a	100	71.371	ENSDORG00000012268	Cnot4	100	72.402	Dipodomys_ordii
ENSGACG00000004276	cnot4a	96	69.402	ENSETEG00000013407	CNOT4	94	83.212	Echinops_telfairi
ENSGACG00000004276	cnot4a	100	67.688	ENSEASG00005014430	CNOT4	100	72.743	Equus_asinus_asinus
ENSGACG00000004276	cnot4a	100	70.817	ENSECAG00000020262	CNOT4	100	72.743	Equus_caballus
ENSGACG00000004276	cnot4a	99	93.455	ENSELUG00000008742	cnot4a	100	94.465	Esox_lucius
ENSGACG00000004276	cnot4a	96	89.668	ENSELUG00000011540	cnot4b	100	67.940	Esox_lucius
ENSGACG00000004276	cnot4a	91	90.189	ENSFCAG00000011904	CNOT4	96	82.578	Felis_catus
ENSGACG00000004276	cnot4a	100	68.589	ENSFALG00000011194	CNOT4	100	68.344	Ficedula_albicollis
ENSGACG00000004276	cnot4a	91	90.189	ENSFDAG00000013525	CNOT4	100	72.743	Fukomys_damarensis
ENSGACG00000004276	cnot4a	100	98.519	ENSFHEG00000006608	cnot4a	99	98.524	Fundulus_heteroclitus
ENSGACG00000004276	cnot4a	96	77.750	ENSGMOG00000001329	cnot4a	100	77.876	Gadus_morhua
ENSGACG00000004276	cnot4a	100	71.218	ENSGALG00000011682	CNOT4	100	70.950	Gallus_gallus
ENSGACG00000004276	cnot4a	100	70.950	ENSGAGG00000017331	CNOT4	100	70.683	Gopherus_agassizii
ENSGACG00000004276	cnot4a	84	89.573	ENSGGOG00000000142	CNOT4	97	87.500	Gorilla_gorilla
ENSGACG00000004276	cnot4a	100	98.889	ENSHBUG00000000027	cnot4a	100	98.889	Haplochromis_burtoni
ENSGACG00000004276	cnot4a	91	90.189	ENSHGLG00000011533	CNOT4	99	90.189	Heterocephalus_glaber_female
ENSGACG00000004276	cnot4a	74	74.240	ENSHGLG00100013058	CNOT4	94	74.240	Heterocephalus_glaber_male
ENSGACG00000004276	cnot4a	99	97.037	ENSHCOG00000015815	cnot4a	100	97.037	Hippocampus_comes
ENSGACG00000004276	cnot4a	100	86.424	ENSIPUG00000006393	cnot4	100	87.459	Ictalurus_punctatus
ENSGACG00000004276	cnot4a	100	91.882	ENSIPUG00000016994	cnot4b	100	91.852	Ictalurus_punctatus
ENSGACG00000004276	cnot4a	91	90.189	ENSSTOG00000007717	CNOT4	100	73.459	Ictidomys_tridecemlineatus
ENSGACG00000004276	cnot4a	75	87.925	ENSJJAG00000019991	-	93	87.925	Jaculus_jaculus
ENSGACG00000004276	cnot4a	91	90.189	ENSJJAG00000016618	Cnot4	100	73.288	Jaculus_jaculus
ENSGACG00000004276	cnot4a	94	98.889	ENSKMAG00000004581	cnot4a	100	98.168	Kryptolebias_marmoratus
ENSGACG00000004276	cnot4a	100	98.889	ENSLBEG00000009999	cnot4a	100	94.271	Labrus_bergylta
ENSGACG00000004276	cnot4a	100	70.285	ENSLACG00000002647	CNOT4	99	70.285	Latimeria_chalumnae
ENSGACG00000004276	cnot4a	100	75.802	ENSLOCG00000016126	cnot4a	100	75.802	Lepisosteus_oculatus
ENSGACG00000004276	cnot4a	100	70.588	ENSLAFG00000000709	CNOT4	100	70.989	Loxodonta_africana
ENSGACG00000004276	cnot4a	91	90.189	ENSMFAG00000046349	CNOT4	97	82.270	Macaca_fascicularis
ENSGACG00000004276	cnot4a	100	70.683	ENSMMUG00000016181	CNOT4	97	82.270	Macaca_mulatta
ENSGACG00000004276	cnot4a	90	90.189	ENSMNEG00000042164	CNOT4	97	82.270	Macaca_nemestrina
ENSGACG00000004276	cnot4a	100	70.683	ENSMLEG00000032709	CNOT4	97	82.270	Mandrillus_leucophaeus
ENSGACG00000004276	cnot4a	100	98.889	ENSMAMG00000023194	cnot4a	100	98.893	Mastacembelus_armatus
ENSGACG00000004276	cnot4a	100	98.889	ENSMZEG00005007312	cnot4a	100	92.963	Maylandia_zebra
ENSGACG00000004276	cnot4a	100	67.853	ENSMGAG00000011788	CNOT4	100	67.607	Meleagris_gallopavo
ENSGACG00000004276	cnot4a	91	90.189	ENSMAUG00000020415	Cnot4	99	90.189	Mesocricetus_auratus
ENSGACG00000004276	cnot4a	100	71.084	ENSMICG00000001667	CNOT4	100	82.284	Microcebus_murinus
ENSGACG00000004276	cnot4a	91	90.189	ENSMOCG00000020955	Cnot4	99	90.189	Microtus_ochrogaster
ENSGACG00000004276	cnot4a	81	97.778	ENSMMOG00000014565	cnot4a	95	97.778	Mola_mola
ENSGACG00000004276	cnot4a	91	90.189	ENSMODG00000014068	CNOT4	99	90.189	Monodelphis_domestica
ENSGACG00000004276	cnot4a	93	98.519	ENSMALG00000011662	cnot4a	83	98.519	Monopterus_albus
ENSGACG00000004276	cnot4a	91	90.189	MGP_CAROLIEiJ_G0028217	Cnot4	99	90.189	Mus_caroli
ENSGACG00000004276	cnot4a	91	90.189	ENSMUSG00000038784	Cnot4	99	90.189	Mus_musculus
ENSGACG00000004276	cnot4a	91	90.189	MGP_PahariEiJ_G0021974	Cnot4	99	90.189	Mus_pahari
ENSGACG00000004276	cnot4a	91	90.189	MGP_SPRETEiJ_G0029216	Cnot4	99	90.189	Mus_spretus
ENSGACG00000004276	cnot4a	91	90.189	ENSMPUG00000004089	CNOT4	100	71.774	Mustela_putorius_furo
ENSGACG00000004276	cnot4a	93	72.743	ENSMLUG00000008260	CNOT4	100	72.743	Myotis_lucifugus
ENSGACG00000004276	cnot4a	91	90.189	ENSNGAG00000015030	Cnot4	100	72.232	Nannospalax_galili
ENSGACG00000004276	cnot4a	91	92.963	ENSNBRG00000021144	cnot4a	100	92.963	Neolamprologus_brichardi
ENSGACG00000004276	cnot4a	100	70.549	ENSNLEG00000013352	CNOT4	97	82.270	Nomascus_leucogenys
ENSGACG00000004276	cnot4a	84	67.965	ENSOPRG00000001023	CNOT4	81	67.965	Ochotona_princeps
ENSGACG00000004276	cnot4a	91	90.189	ENSODEG00000012975	CNOT4	100	72.572	Octodon_degus
ENSGACG00000004276	cnot4a	100	98.889	ENSONIG00000008656	cnot4a	100	92.279	Oreochromis_niloticus
ENSGACG00000004276	cnot4a	91	90.189	ENSOANG00000005006	CNOT4	100	71.582	Ornithorhynchus_anatinus
ENSGACG00000004276	cnot4a	91	90.189	ENSOCUG00000013448	CNOT4	100	71.909	Oryctolagus_cuniculus
ENSGACG00000004276	cnot4a	100	88.792	ENSORLG00000003727	cnot4a	100	97.436	Oryzias_latipes
ENSGACG00000004276	cnot4a	100	88.667	ENSORLG00020015684	cnot4a	100	97.436	Oryzias_latipes_hni
ENSGACG00000004276	cnot4a	100	89.041	ENSORLG00015008470	cnot4a	100	97.436	Oryzias_latipes_hsok
ENSGACG00000004276	cnot4a	100	89.788	ENSOMEG00000011084	cnot4a	100	98.168	Oryzias_melastigma
ENSGACG00000004276	cnot4a	100	70.950	ENSOGAG00000015499	CNOT4	100	71.352	Otolemur_garnettii
ENSGACG00000004276	cnot4a	100	70.950	ENSOARG00000008803	CNOT4	100	71.352	Ovis_aries
ENSGACG00000004276	cnot4a	100	70.415	ENSPPAG00000041937	CNOT4	97	82.506	Pan_paniscus
ENSGACG00000004276	cnot4a	100	71.084	ENSPPRG00000023940	CNOT4	100	72.913	Panthera_pardus
ENSGACG00000004276	cnot4a	91	90.189	ENSPTIG00000016601	CNOT4	96	82.578	Panthera_tigris_altaica
ENSGACG00000004276	cnot4a	100	70.281	ENSPTRG00000019727	CNOT4	97	82.270	Pan_troglodytes
ENSGACG00000004276	cnot4a	100	70.549	ENSPANG00000017724	CNOT4	97	82.270	Papio_anubis
ENSGACG00000004276	cnot4a	100	86.667	ENSPKIG00000018137	cnot4a	100	90.370	Paramormyrops_kingsleyae
ENSGACG00000004276	cnot4a	100	67.482	ENSPSIG00000011256	CNOT4	100	67.237	Pelodiscus_sinensis
ENSGACG00000004276	cnot4a	91	96.296	ENSPMGG00000005671	cnot4a	100	96.296	Periophthalmus_magnuspinnatus
ENSGACG00000004276	cnot4a	91	90.189	ENSPEMG00000021566	Cnot4	99	90.189	Peromyscus_maniculatus_bairdii
ENSGACG00000004276	cnot4a	91	90.189	ENSPCIG00000029622	CNOT4	95	90.189	Phascolarctos_cinereus
ENSGACG00000004276	cnot4a	100	98.889	ENSPFOG00000002228	cnot4a	100	91.180	Poecilia_formosa
ENSGACG00000004276	cnot4a	100	98.889	ENSPLAG00000001780	cnot4a	100	98.168	Poecilia_latipinna
ENSGACG00000004276	cnot4a	100	98.889	ENSPMEG00000006852	cnot4a	100	98.168	Poecilia_mexicana
ENSGACG00000004276	cnot4a	100	98.889	ENSPREG00000008171	cnot4a	100	95.683	Poecilia_reticulata
ENSGACG00000004276	cnot4a	91	90.189	ENSPPYG00000018026	CNOT4	100	70.912	Pongo_abelii
ENSGACG00000004276	cnot4a	100	70.817	ENSPCOG00000019907	CNOT4	100	82.284	Propithecus_coquereli
ENSGACG00000004276	cnot4a	93	71.223	ENSPVAG00000004905	CNOT4	92	69.147	Pteropus_vampyrus
ENSGACG00000004276	cnot4a	100	98.889	ENSPNYG00000004276	cnot4a	100	92.963	Pundamilia_nyererei
ENSGACG00000004276	cnot4a	92	94.444	ENSPNAG00000020433	cnot4a	100	94.444	Pygocentrus_nattereri
ENSGACG00000004276	cnot4a	100	91.882	ENSPNAG00000008679	cnot4b	100	91.852	Pygocentrus_nattereri
ENSGACG00000004276	cnot4a	91	90.189	ENSRNOG00000010795	Cnot4	99	90.189	Rattus_norvegicus
ENSGACG00000004276	cnot4a	100	70.683	ENSRBIG00000043977	CNOT4	97	82.270	Rhinopithecus_bieti
ENSGACG00000004276	cnot4a	91	90.189	ENSSBOG00000020808	CNOT4	99	81.481	Saimiri_boliviensis_boliviensis
ENSGACG00000004276	cnot4a	91	90.189	ENSSHAG00000013639	CNOT4	99	90.189	Sarcophilus_harrisii
ENSGACG00000004276	cnot4a	92	92.674	ENSSFOG00015017285	CNOT4	100	92.674	Scleropages_formosus
ENSGACG00000004276	cnot4a	89	91.154	ENSSFOG00015002019	cnot4a	100	90.741	Scleropages_formosus
ENSGACG00000004276	cnot4a	100	98.889	ENSSMAG00000008614	cnot4a	100	98.893	Scophthalmus_maximus
ENSGACG00000004276	cnot4a	100	98.889	ENSSDUG00000022635	cnot4a	100	98.889	Seriola_dumerili
ENSGACG00000004276	cnot4a	90	92.910	ENSSDUG00000018585	cnot4b	99	92.910	Seriola_dumerili
ENSGACG00000004276	cnot4a	100	98.889	ENSSLDG00000015770	cnot4a	100	98.893	Seriola_lalandi_dorsalis
ENSGACG00000004276	cnot4a	100	63.203	ENSSLDG00000014347	cnot4b	100	63.216	Seriola_lalandi_dorsalis
ENSGACG00000004276	cnot4a	91	87.956	ENSSPUG00000004677	CNOT4	100	87.956	Sphenodon_punctatus
ENSGACG00000004276	cnot4a	100	98.889	ENSSPAG00000012329	cnot4a	100	98.889	Stegastes_partitus
ENSGACG00000004276	cnot4a	100	70.817	ENSSSCG00000021354	CNOT4	100	72.913	Sus_scrofa
ENSGACG00000004276	cnot4a	100	68.466	ENSTGUG00000009161	CNOT4	100	68.344	Taeniopygia_guttata
ENSGACG00000004276	cnot4a	100	97.778	ENSTRUG00000016861	cnot4a	100	97.778	Takifugu_rubripes
ENSGACG00000004276	cnot4a	100	86.703	ENSTNIG00000016000	cnot4a	99	91.144	Tetraodon_nigroviridis
ENSGACG00000004276	cnot4a	93	66.619	ENSTBEG00000002202	CNOT4	88	65.235	Tupaia_belangeri
ENSGACG00000004276	cnot4a	93	72.023	ENSTTRG00000005122	CNOT4	90	71.034	Tursiops_truncatus
ENSGACG00000004276	cnot4a	93	72.913	ENSUAMG00000026759	CNOT4	100	72.913	Ursus_americanus
ENSGACG00000004276	cnot4a	99	70.929	ENSUMAG00000015351	CNOT4	94	75.134	Ursus_maritimus
ENSGACG00000004276	cnot4a	90	90.189	ENSVVUG00000006200	CNOT4	100	73.459	Vulpes_vulpes
ENSGACG00000004276	cnot4a	92	88.889	ENSXETG00000010594	cnot4	89	88.889	Xenopus_tropicalis
ENSGACG00000004276	cnot4a	85	89.286	ENSXCOG00000020824	cnot4a	98	89.907	Xiphophorus_couchianus
ENSGACG00000004276	cnot4a	100	98.889	ENSXMAG00000016984	cnot4a	100	98.168	Xiphophorus_maculatus