EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004373 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 4576 bases
Position: chrgroupXV:330050-334625
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000005793	TruB_N	PF01509.18	2.4e-22	1	1
ENSGACP00000005785	TruB_N	PF01509.18	4.2e-22	1	1
ENSGACP00000005806	PUA	PF01472.20	2.3e-17	1	1
ENSGACP00000005785	PUA	PF01472.20	4.9e-17	1	1
ENSGACP00000005793	PUA	PF01472.20	5.7e-15	1	1
ENSGACP00000005785	DKCLD	PF08068.12	4.1e-31	1	1
ENSGACP00000005793	DKCLD	PF08068.12	7.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000005822	-	1557	-	ENSGACP00000005806	270 (aa)	-	G3NKE4
ENSGACT00000005809	-	1217	-	ENSGACP00000005793	342 (aa)	-	G3NKD1
ENSGACT00000005801	-	1242	-	ENSGACP00000005785	414 (aa)	-	G3NKC3

Gene Model

Click here to download ENSGACG00000004373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004373's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004373	dkc1	96	88.754	ENSG00000130826	DKC1	99	87.317	Homo_sapiens
ENSGACG00000004373	dkc1	96	95.441	ENSAPOG00000007799	dkc1	81	92.665	Acanthochromis_polyacanthus
ENSGACG00000004373	dkc1	96	89.362	ENSAMEG00000002776	DKC1	78	87.121	Ailuropoda_melanoleuca
ENSGACG00000004373	dkc1	96	95.441	ENSACIG00000022614	dkc1	83	94.724	Amphilophus_citrinellus
ENSGACG00000004373	dkc1	96	95.137	ENSAOCG00000013159	dkc1	80	92.929	Amphiprion_ocellaris
ENSGACG00000004373	dkc1	96	95.137	ENSAPEG00000002284	dkc1	84	91.019	Amphiprion_percula
ENSGACG00000004373	dkc1	96	92.857	ENSATEG00000013682	dkc1	79	91.605	Anabas_testudineus
ENSGACG00000004373	dkc1	96	90.578	ENSACAG00000015600	DKC1	69	87.688	Anolis_carolinensis
ENSGACG00000004373	dkc1	96	89.362	ENSANAG00000022732	DKC1	77	87.626	Aotus_nancymaae
ENSGACG00000004373	dkc1	96	94.833	ENSACLG00000015605	dkc1	81	93.719	Astatotilapia_calliptera
ENSGACG00000004373	dkc1	99	91.687	ENSAMXG00000017108	dkc1	81	91.687	Astyanax_mexicanus
ENSGACG00000004373	dkc1	96	89.058	ENSBTAG00000013045	DKC1	79	86.432	Bos_taurus
ENSGACG00000004373	dkc1	96	66.565	WBGene00010478	K01G5.5	88	64.885	Caenorhabditis_elegans
ENSGACG00000004373	dkc1	96	88.754	ENSCJAG00000004210	DKC1	77	87.121	Callithrix_jacchus
ENSGACG00000004373	dkc1	96	78.116	ENSCAFG00000009311	-	78	77.468	Canis_familiaris
ENSGACG00000004373	dkc1	96	88.754	ENSCAFG00000019620	-	77	86.616	Canis_familiaris
ENSGACG00000004373	dkc1	96	77.508	ENSCAFG00020009379	-	75	76.962	Canis_lupus_dingo
ENSGACG00000004373	dkc1	96	88.754	ENSCAFG00020008918	-	77	86.616	Canis_lupus_dingo
ENSGACG00000004373	dkc1	96	89.058	ENSCHIG00000017392	DKC1	79	86.683	Capra_hircus
ENSGACG00000004373	dkc1	96	88.754	ENSTSYG00000007681	DKC1	76	87.121	Carlito_syrichta
ENSGACG00000004373	dkc1	97	88.822	ENSCAPG00000003342	DKC1	82	88.398	Cavia_aperea
ENSGACG00000004373	dkc1	96	89.058	ENSCPOG00000008825	DKC1	78	86.935	Cavia_porcellus
ENSGACG00000004373	dkc1	96	76.382	ENSCCAG00000027418	DKC1	75	76.768	Cebus_capucinus
ENSGACG00000004373	dkc1	96	88.754	ENSCATG00000033602	DKC1	77	86.869	Cercocebus_atys
ENSGACG00000004373	dkc1	96	89.058	ENSCLAG00000000720	DKC1	79	86.935	Chinchilla_lanigera
ENSGACG00000004373	dkc1	96	88.754	ENSCSAG00000006706	DKC1	77	86.869	Chlorocebus_sabaeus
ENSGACG00000004373	dkc1	96	90.274	ENSCPBG00000005858	DKC1	85	86.683	Chrysemys_picta_bellii
ENSGACG00000004373	dkc1	96	84.195	ENSCING00000004599	-	76	80.711	Ciona_intestinalis
ENSGACG00000004373	dkc1	96	84.498	ENSCSAVG00000010047	-	88	79.442	Ciona_savignyi
ENSGACG00000004373	dkc1	96	88.754	ENSCANG00000027987	DKC1	77	86.869	Colobus_angolensis_palliatus
ENSGACG00000004373	dkc1	95	66.358	ENSCGRG00001016789	-	79	67.297	Cricetulus_griseus_chok1gshd
ENSGACG00000004373	dkc1	96	88.754	ENSCGRG00001014574	-	78	86.683	Cricetulus_griseus_chok1gshd
ENSGACG00000004373	dkc1	96	88.754	ENSCGRG00000016075	-	78	86.683	Cricetulus_griseus_crigri
ENSGACG00000004373	dkc1	95	66.358	ENSCGRG00000014809	-	77	67.297	Cricetulus_griseus_crigri
ENSGACG00000004373	dkc1	97	93.300	ENSCSEG00000012633	dkc1	85	93.467	Cynoglossus_semilaevis
ENSGACG00000004373	dkc1	96	94.225	ENSCVAG00000010155	dkc1	81	92.233	Cyprinodon_variegatus
ENSGACG00000004373	dkc1	96	93.921	ENSDARG00000016484	dkc1	79	93.216	Danio_rerio
ENSGACG00000004373	dkc1	96	89.362	ENSDNOG00000004218	DKC1	78	87.186	Dasypus_novemcinctus
ENSGACG00000004373	dkc1	71	73.251	ENSDORG00000013566	-	92	72.760	Dipodomys_ordii
ENSGACG00000004373	dkc1	96	75.076	FBgn0259937	Nop60B	88	70.000	Drosophila_melanogaster
ENSGACG00000004373	dkc1	96	88.754	ENSETEG00000016095	DKC1	80	86.364	Echinops_telfairi
ENSGACG00000004373	dkc1	85	81.315	ENSEBUG00000015962	dkc1	98	81.443	Eptatretus_burgeri
ENSGACG00000004373	dkc1	92	64.000	ENSEBUG00000016062	dkc1	98	63.454	Eptatretus_burgeri
ENSGACG00000004373	dkc1	96	89.058	ENSEASG00005007484	DKC1	76	86.869	Equus_asinus_asinus
ENSGACG00000004373	dkc1	96	89.058	ENSECAG00000023524	DKC1	76	86.869	Equus_caballus
ENSGACG00000004373	dkc1	96	89.362	ENSEEUG00000003323	DKC1	91	87.113	Erinaceus_europaeus
ENSGACG00000004373	dkc1	96	94.833	ENSELUG00000014538	dkc1	80	93.719	Esox_lucius
ENSGACG00000004373	dkc1	96	89.058	ENSFCAG00000006577	DKC1	79	86.432	Felis_catus
ENSGACG00000004373	dkc1	96	87.761	ENSFALG00000011496	DKC1	77	85.644	Ficedula_albicollis
ENSGACG00000004373	dkc1	96	88.754	ENSFDAG00000002516	DKC1	80	86.181	Fukomys_damarensis
ENSGACG00000004373	dkc1	96	93.617	ENSFHEG00000004627	dkc1	79	91.709	Fundulus_heteroclitus
ENSGACG00000004373	dkc1	96	94.833	ENSGMOG00000017277	dkc1	100	90.026	Gadus_morhua
ENSGACG00000004373	dkc1	96	88.754	ENSGALG00000005054	DKC1	77	87.121	Gallus_gallus
ENSGACG00000004373	dkc1	96	94.225	ENSGAFG00000011486	dkc1	68	93.418	Gambusia_affinis
ENSGACG00000004373	dkc1	96	89.666	ENSGAGG00000011330	DKC1	76	87.056	Gopherus_agassizii
ENSGACG00000004373	dkc1	96	88.754	ENSGGOG00000001045	DKC1	77	87.121	Gorilla_gorilla
ENSGACG00000004373	dkc1	96	94.529	ENSHBUG00000012436	dkc1	80	93.467	Haplochromis_burtoni
ENSGACG00000004373	dkc1	96	88.146	ENSHGLG00000000649	DKC1	77	86.181	Heterocephalus_glaber_female
ENSGACG00000004373	dkc1	96	88.146	ENSHGLG00100001153	DKC1	78	86.181	Heterocephalus_glaber_male
ENSGACG00000004373	dkc1	96	92.705	ENSHCOG00000021099	dkc1	78	92.405	Hippocampus_comes
ENSGACG00000004373	dkc1	96	93.009	ENSIPUG00000010309	dkc1	79	90.954	Ictalurus_punctatus
ENSGACG00000004373	dkc1	96	89.058	ENSSTOG00000001074	-	82	86.432	Ictidomys_tridecemlineatus
ENSGACG00000004373	dkc1	99	77.184	ENSSTOG00000020149	-	78	78.392	Ictidomys_tridecemlineatus
ENSGACG00000004373	dkc1	96	74.468	ENSSTOG00000011904	-	73	74.121	Ictidomys_tridecemlineatus
ENSGACG00000004373	dkc1	71	72.840	ENSJJAG00000010086	-	92	73.285	Jaculus_jaculus
ENSGACG00000004373	dkc1	96	92.401	ENSKMAG00000008010	dkc1	80	90.955	Kryptolebias_marmoratus
ENSGACG00000004373	dkc1	96	95.137	ENSLBEG00000019122	dkc1	84	93.902	Labrus_bergylta
ENSGACG00000004373	dkc1	96	89.666	ENSLACG00000014025	DKC1	91	87.186	Latimeria_chalumnae
ENSGACG00000004373	dkc1	96	93.921	ENSLOCG00000013713	dkc1	80	93.005	Lepisosteus_oculatus
ENSGACG00000004373	dkc1	96	88.754	ENSLAFG00000000221	DKC1	77	86.181	Loxodonta_africana
ENSGACG00000004373	dkc1	96	88.754	ENSMFAG00000032398	DKC1	67	86.432	Macaca_fascicularis
ENSGACG00000004373	dkc1	96	88.754	ENSMMUG00000005768	DKC1	77	86.869	Macaca_mulatta
ENSGACG00000004373	dkc1	96	88.754	ENSMNEG00000034503	DKC1	77	86.869	Macaca_nemestrina
ENSGACG00000004373	dkc1	96	88.754	ENSMLEG00000034422	DKC1	77	86.869	Mandrillus_leucophaeus
ENSGACG00000004373	dkc1	97	95.037	ENSMAMG00000005427	dkc1	89	95.477	Mastacembelus_armatus
ENSGACG00000004373	dkc1	96	94.833	ENSMZEG00005014503	dkc1	80	93.719	Maylandia_zebra
ENSGACG00000004373	dkc1	96	88.450	ENSMGAG00000009238	DKC1	79	88.674	Meleagris_gallopavo
ENSGACG00000004373	dkc1	71	72.428	ENSMAUG00000016454	-	92	72.043	Mesocricetus_auratus
ENSGACG00000004373	dkc1	96	88.450	ENSMICG00000038751	-	79	85.930	Microcebus_murinus
ENSGACG00000004373	dkc1	96	78.788	ENSMICG00000002818	-	99	76.374	Microcebus_murinus
ENSGACG00000004373	dkc1	71	69.959	ENSMOCG00000001169	-	92	69.176	Microtus_ochrogaster
ENSGACG00000004373	dkc1	96	95.441	ENSMMOG00000020348	dkc1	87	94.724	Mola_mola
ENSGACG00000004373	dkc1	96	88.146	ENSMODG00000009243	DKC1	68	86.514	Monodelphis_domestica
ENSGACG00000004373	dkc1	96	95.137	ENSMALG00000009454	dkc1	79	94.472	Monopterus_albus
ENSGACG00000004373	dkc1	96	74.777	MGP_CAROLIEiJ_G0033191	Dkc1	86	84.127	Mus_caroli
ENSGACG00000004373	dkc1	96	89.058	ENSMUSG00000031403	Dkc1	92	72.760	Mus_musculus
ENSGACG00000004373	dkc1	96	88.450	MGP_PahariEiJ_G0031735	Dkc1	92	72.043	Mus_pahari
ENSGACG00000004373	dkc1	96	89.058	MGP_SPRETEiJ_G0034351	Dkc1	92	72.760	Mus_spretus
ENSGACG00000004373	dkc1	96	88.754	ENSMPUG00000016136	DKC1	73	86.869	Mustela_putorius_furo
ENSGACG00000004373	dkc1	96	84.802	ENSMLUG00000011918	DKC1	76	83.166	Myotis_lucifugus
ENSGACG00000004373	dkc1	71	72.840	ENSNGAG00000015724	-	92	73.118	Nannospalax_galili
ENSGACG00000004373	dkc1	96	94.833	ENSNBRG00000005638	dkc1	80	94.221	Neolamprologus_brichardi
ENSGACG00000004373	dkc1	96	88.754	ENSNLEG00000014323	DKC1	77	87.121	Nomascus_leucogenys
ENSGACG00000004373	dkc1	99	81.114	ENSMEUG00000001066	DKC1	87	81.910	Notamacropus_eugenii
ENSGACG00000004373	dkc1	84	88.811	ENSOPRG00000005248	DKC1	69	80.172	Ochotona_princeps
ENSGACG00000004373	dkc1	96	89.666	ENSODEG00000011816	-	78	88.384	Octodon_degus
ENSGACG00000004373	dkc1	71	72.840	ENSODEG00000000549	-	92	72.760	Octodon_degus
ENSGACG00000004373	dkc1	96	94.529	ENSONIG00000013889	dkc1	79	93.970	Oreochromis_niloticus
ENSGACG00000004373	dkc1	63	78.140	ENSOANG00000022295	-	70	69.721	Ornithorhynchus_anatinus
ENSGACG00000004373	dkc1	96	90.578	ENSOANG00000008713	-	80	89.637	Ornithorhynchus_anatinus
ENSGACG00000004373	dkc1	96	89.058	ENSOCUG00000012646	DKC1	77	86.582	Oryctolagus_cuniculus
ENSGACG00000004373	dkc1	96	93.617	ENSORLG00000018748	dkc1	78	91.646	Oryzias_latipes
ENSGACG00000004373	dkc1	96	93.313	ENSOMEG00000005786	dkc1	86	89.200	Oryzias_melastigma
ENSGACG00000004373	dkc1	96	89.362	ENSOGAG00000003399	DKC1	76	87.121	Otolemur_garnettii
ENSGACG00000004373	dkc1	96	89.058	ENSOARG00000003047	DKC1	79	86.683	Ovis_aries
ENSGACG00000004373	dkc1	96	88.754	ENSPPAG00000023820	DKC1	77	87.121	Pan_paniscus
ENSGACG00000004373	dkc1	96	89.058	ENSPPRG00000009104	DKC1	79	86.432	Panthera_pardus
ENSGACG00000004373	dkc1	96	89.058	ENSPTIG00000017469	DKC1	80	86.432	Panthera_tigris_altaica
ENSGACG00000004373	dkc1	96	88.754	ENSPTRG00000043416	-	67	86.683	Pan_troglodytes
ENSGACG00000004373	dkc1	96	88.754	ENSPTRG00000022449	DKC1	77	87.121	Pan_troglodytes
ENSGACG00000004373	dkc1	96	88.754	ENSPANG00000011978	DKC1	77	86.869	Papio_anubis
ENSGACG00000004373	dkc1	96	93.617	ENSPKIG00000008443	dkc1	84	92.405	Paramormyrops_kingsleyae
ENSGACG00000004373	dkc1	96	90.274	ENSPSIG00000013765	DKC1	86	89.636	Pelodiscus_sinensis
ENSGACG00000004373	dkc1	96	89.058	ENSPMGG00000004097	dkc1	73	87.688	Periophthalmus_magnuspinnatus
ENSGACG00000004373	dkc1	96	49.500	ENSPEMG00000013348	Dkc1	74	49.500	Peromyscus_maniculatus_bairdii
ENSGACG00000004373	dkc1	96	88.146	ENSPCIG00000016706	DKC1	67	85.678	Phascolarctos_cinereus
ENSGACG00000004373	dkc1	96	94.225	ENSPFOG00000018653	dkc1	80	93.467	Poecilia_formosa
ENSGACG00000004373	dkc1	96	94.225	ENSPLAG00000003272	dkc1	72	93.467	Poecilia_latipinna
ENSGACG00000004373	dkc1	96	94.225	ENSPMEG00000010413	dkc1	80	93.467	Poecilia_mexicana
ENSGACG00000004373	dkc1	96	93.921	ENSPREG00000004100	dkc1	78	93.216	Poecilia_reticulata
ENSGACG00000004373	dkc1	96	88.754	ENSPPYG00000020892	DKC1	78	87.121	Pongo_abelii
ENSGACG00000004373	dkc1	96	88.450	ENSPCAG00000015034	DKC1	71	87.293	Procavia_capensis
ENSGACG00000004373	dkc1	96	88.754	ENSPCOG00000026874	DKC1	77	86.616	Propithecus_coquereli
ENSGACG00000004373	dkc1	96	88.450	ENSPVAG00000009222	DKC1	79	86.364	Pteropus_vampyrus
ENSGACG00000004373	dkc1	96	94.833	ENSPNYG00000020063	dkc1	79	93.719	Pundamilia_nyererei
ENSGACG00000004373	dkc1	96	92.705	ENSPNAG00000005780	dkc1	79	91.457	Pygocentrus_nattereri
ENSGACG00000004373	dkc1	96	86.018	ENSRNOG00000055562	Dkc1	78	82.116	Rattus_norvegicus
ENSGACG00000004373	dkc1	96	88.754	ENSRBIG00000028457	DKC1	67	86.432	Rhinopithecus_bieti
ENSGACG00000004373	dkc1	96	88.754	ENSRROG00000044780	DKC1	77	86.869	Rhinopithecus_roxellana
ENSGACG00000004373	dkc1	96	71.733	YLR175W	-	79	69.974	Saccharomyces_cerevisiae
ENSGACG00000004373	dkc1	96	88.754	ENSSBOG00000033746	DKC1	77	87.121	Saimiri_boliviensis_boliviensis
ENSGACG00000004373	dkc1	96	88.146	ENSSHAG00000002463	DKC1	84	85.930	Sarcophilus_harrisii
ENSGACG00000004373	dkc1	96	93.313	ENSSFOG00015009585	dkc1	78	91.457	Scleropages_formosus
ENSGACG00000004373	dkc1	96	94.975	ENSSMAG00000002552	dkc1	79	95.652	Scophthalmus_maximus
ENSGACG00000004373	dkc1	96	94.833	ENSSDUG00000009963	dkc1	79	94.724	Seriola_dumerili
ENSGACG00000004373	dkc1	96	94.833	ENSSLDG00000019342	dkc1	86	92.754	Seriola_lalandi_dorsalis
ENSGACG00000004373	dkc1	96	83.587	ENSSARG00000001822	DKC1	79	81.910	Sorex_araneus
ENSGACG00000004373	dkc1	96	89.666	ENSSPUG00000018907	DKC1	75	86.364	Sphenodon_punctatus
ENSGACG00000004373	dkc1	96	94.833	ENSSPAG00000002585	dkc1	75	94.937	Stegastes_partitus
ENSGACG00000004373	dkc1	96	89.058	ENSSSCG00000012823	DKC1	83	86.432	Sus_scrofa
ENSGACG00000004373	dkc1	96	89.362	ENSTGUG00000006781	DKC1	80	89.779	Taeniopygia_guttata
ENSGACG00000004373	dkc1	96	94.833	ENSTRUG00000004413	dkc1	79	93.655	Takifugu_rubripes
ENSGACG00000004373	dkc1	99	73.253	ENSTNIG00000002582	dkc1	78	74.750	Tetraodon_nigroviridis
ENSGACG00000004373	dkc1	69	88.136	ENSTBEG00000011262	DKC1	74	86.245	Tupaia_belangeri
ENSGACG00000004373	dkc1	73	88.306	ENSTTRG00000008089	DKC1	55	87.365	Tursiops_truncatus
ENSGACG00000004373	dkc1	96	89.058	ENSUAMG00000022721	DKC1	84	86.181	Ursus_americanus
ENSGACG00000004373	dkc1	96	88.450	ENSUMAG00000016899	DKC1	92	87.831	Ursus_maritimus
ENSGACG00000004373	dkc1	96	86.905	ENSVVUG00000020734	-	70	84.691	Vulpes_vulpes
ENSGACG00000004373	dkc1	96	71.970	ENSVVUG00000021671	-	73	71.970	Vulpes_vulpes
ENSGACG00000004373	dkc1	96	91.489	ENSXETG00000032517	DKC1	79	90.380	Xenopus_tropicalis
ENSGACG00000004373	dkc1	96	93.617	ENSXCOG00000005498	dkc1	85	92.965	Xiphophorus_couchianus
ENSGACG00000004373	dkc1	96	93.313	ENSXMAG00000004919	dkc1	80	92.714	Xiphophorus_maculatus