EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000004490 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Minus strand
Length
6832 bases
Position
chrgroupV:5595271-5602102
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000005928GTP_EFTUPF00009.274.6e-4611
ENSGACP00000005945GTP_EFTUPF00009.278.7e-4611
ENSGACP00000005937GTP_EFTUPF00009.278.8e-4611
ENSGACP00000005928GTP_EFTU_D3PF03143.171.2e-3111
ENSGACP00000005937GTP_EFTU_D3PF03143.171.2e-3111
ENSGACP00000005945GTP_EFTU_D3PF03143.171.2e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000005954-1864-ENSGACP00000005937577 (aa)-G3NKS4
ENSGACT00000005962-1846-ENSGACP00000005945574 (aa)-G3NKT2
ENSGACT00000005945-2616-ENSGACP00000005928590 (aa)-G3NKR5
Gene Model
Click here to download ENSGACG00000004490's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004490's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000004490-7341.176ENSGACG00000011035hbs1l6241.412
ENSGACG00000004490-7538.149ENSGACG00000018090eef1a1b9538.409
ENSGACG00000004490-10080.672ENSGACG00000004324gspt1l10079.966
ENSGACG00000004490-7438.636ENSGACG00000002182-9438.902
ENSGACG00000004490-7537.698ENSGACG00000002175-9537.955
ENSGACG00000004490-7536.465ENSGACG00000004505si:dkey-37o8.19636.712
ENSGACG00000004490-7538.514ENSGACG00000002143-9538.776
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000004490-9975.345ENSG00000103342GSPT18691.803Homo_sapiens
ENSGACG00000004490-10080.880ENSAPOG00000002524gspt1l10080.135Acanthochromis_polyacanthus
ENSGACG00000004490-7697.267ENSAPOG00000004594-10091.186Acanthochromis_polyacanthus
ENSGACG00000004490-8882.409ENSAMEG00000009589GSPT19781.176Ailuropoda_melanoleuca
ENSGACG00000004490-8684.676ENSACIG00000007028-9390.086Amphilophus_citrinellus
ENSGACG00000004490-7691.096ENSACIG00000006643GSPT19986.220Amphilophus_citrinellus
ENSGACG00000004490-10090.508ENSAOCG00000020972-10091.017Amphiprion_ocellaris
ENSGACG00000004490-10080.711ENSAOCG00000016342gspt1l9688.110Amphiprion_ocellaris
ENSGACG00000004490-10080.711ENSAPEG00000010261gspt1l10079.966Amphiprion_percula
ENSGACG00000004490-8686.667ENSAPEG00000003359-9987.795Amphiprion_percula
ENSGACG00000004490-10090.847ENSATEG00000009194GSPT110090.169Anabas_testudineus
ENSGACG00000004490-10080.537ENSATEG00000007769gspt1l10078.921Anabas_testudineus
ENSGACG00000004490-8783.398ENSACAG00000003979GSPT19682.432Anolis_carolinensis
ENSGACG00000004490-9273.502ENSANAG00000036504GSPT19073.502Aotus_nancymaae
ENSGACG00000004490-10082.095ENSACLG00000011643gspt1l10080.541Astatotilapia_calliptera
ENSGACG00000004490-10089.492ENSACLG00000017598-10089.831Astatotilapia_calliptera
ENSGACG00000004490-10078.631ENSAMXG00000002781gspt1l8677.663Astyanax_mexicanus
ENSGACG00000004490-10081.525ENSAMXG00000008638gspt110079.725Astyanax_mexicanus
ENSGACG00000004490-9975.986ENSBTAG00000003577GSPT19772.419Bos_taurus
ENSGACG00000004490-9976.379ENSCJAG00000018191GSPT19773.841Callithrix_jacchus
ENSGACG00000004490-8882.692ENSCAFG00000018856GSPT19781.460Canis_familiaris
ENSGACG00000004490-9974.590ENSCAFG00020024250GSPT19079.558Canis_lupus_dingo
ENSGACG00000004490-9976.166ENSCHIG00000009274GSPT19873.719Capra_hircus
ENSGACG00000004490-8882.500ENSTSYG00000013812-9781.460Carlito_syrichta
ENSGACG00000004490-8867.115ENSTSYG00000036050-8565.483Carlito_syrichta
ENSGACG00000004490-8270.526ENSCAPG00000014454GSPT19870.737Cavia_aperea
ENSGACG00000004490-9975.214ENSCPOG00000009381GSPT19081.028Cavia_porcellus
ENSGACG00000004490-9271.165ENSCCAG00000036663-8181.221Cebus_capucinus
ENSGACG00000004490-9971.552ENSCATG00000025774GSPT19668.558Cercocebus_atys
ENSGACG00000004490-9975.649ENSCLAG00000011772GSPT18791.101Chinchilla_lanigera
ENSGACG00000004490-9975.862ENSCSAG00000008244GSPT19672.846Chlorocebus_sabaeus
ENSGACG00000004490-9955.485ENSCHOG00000003850GSPT18553.635Choloepus_hoffmanni
ENSGACG00000004490-9978.438ENSCPBG00000020430GSPT19879.464Chrysemys_picta_bellii
ENSGACG00000004490-8966.067ENSCSAVG00000010206-9958.140Ciona_savignyi
ENSGACG00000004490-8765.310ENSCANG00000035684GSPT18372.430Colobus_angolensis_palliatus
ENSGACG00000004490-10075.382ENSCGRG00001009583Gspt18691.569Cricetulus_griseus_chok1gshd
ENSGACG00000004490-10075.552ENSCGRG00000002048Gspt18691.569Cricetulus_griseus_crigri
ENSGACG00000004490-10088.475ENSCSEG00000019708GSPT110088.136Cynoglossus_semilaevis
ENSGACG00000004490-10090.000ENSCVAG00000000869GSPT110089.831Cyprinodon_variegatus
ENSGACG00000004490-10066.948ENSCVAG00000016392-10065.085Cyprinodon_variegatus
ENSGACG00000004490-10080.912ENSDARG00000098627gspt1l10079.381Danio_rerio
ENSGACG00000004490-10080.678ENSDARG00000031048gspt110078.644Danio_rerio
ENSGACG00000004490-8782.913ENSDNOG00000004608GSPT18691.803Dasypus_novemcinctus
ENSGACG00000004490-8683.794ENSDORG00000025038Gspt19287.069Dipodomys_ordii
ENSGACG00000004490-9974.746ENSETEG00000018249GSPT19772.364Echinops_telfairi
ENSGACG00000004490-9975.000ENSEASG00005011497GSPT19673.269Equus_asinus_asinus
ENSGACG00000004490-8485.396ENSECAG00000021195GSPT18891.803Equus_caballus
ENSGACG00000004490-9967.197ENSEEUG00000008851GSPT19069.808Erinaceus_europaeus
ENSGACG00000004490-10080.103ENSELUG00000023492gspt1l10080.912Esox_lucius
ENSGACG00000004490-9093.891ENSELUG00000019323-10081.983Esox_lucius
ENSGACG00000004490-9975.128ENSFCAG00000022281GSPT19773.034Felis_catus
ENSGACG00000004490-8980.871ENSFALG00000003880GSPT18380.747Ficedula_albicollis
ENSGACG00000004490-8882.308ENSFDAG00000008253GSPT19881.065Fukomys_damarensis
ENSGACG00000004490-10081.356ENSFHEG00000009090gspt1l10079.931Fundulus_heteroclitus
ENSGACG00000004490-10086.242ENSGMOG00000013056GSPT110087.081Gadus_morhua
ENSGACG00000004490-8973.585ENSGMOG00000009933-8872.837Gadus_morhua
ENSGACG00000004490-9876.256ENSGALG00000039500GSPT29872.330Gallus_gallus
ENSGACG00000004490-7790.950ENSGAFG00000020793-9489.316Gambusia_affinis
ENSGACG00000004490-10080.705ENSGAFG00000005676gspt1l10079.831Gambusia_affinis
ENSGACG00000004490-9875.606ENSGAGG00000016315GSPT19574.916Gopherus_agassizii
ENSGACG00000004490-9975.690ENSGGOG00000004071GSPT19875.382Gorilla_gorilla
ENSGACG00000004490-7593.519ENSHBUG00000006257gspt1l9993.677Haplochromis_burtoni
ENSGACG00000004490-10089.831ENSHBUG00000001538GSPT110090.169Haplochromis_burtoni
ENSGACG00000004490-9967.637ENSHGLG00000012034-9567.347Heterocephalus_glaber_female
ENSGACG00000004490-9975.000ENSHGLG00000010520-8691.101Heterocephalus_glaber_female
ENSGACG00000004490-9964.883ENSHGLG00100010030-10065.217Heterocephalus_glaber_male
ENSGACG00000004490-8881.923ENSHGLG00100015621-9881.102Heterocephalus_glaber_male
ENSGACG00000004490-10086.802ENSHCOG00000015286GSPT110086.464Hippocampus_comes
ENSGACG00000004490-10080.201ENSHCOG00000016899gspt1l10079.764Hippocampus_comes
ENSGACG00000004490-10080.944ENSIPUG00000011358Gspt110080.405Ictalurus_punctatus
ENSGACG00000004490-10080.236ENSIPUG00000001655Gspt19983.716Ictalurus_punctatus
ENSGACG00000004490-8883.172ENSSTOG00000015406GSPT19881.349Ictidomys_tridecemlineatus
ENSGACG00000004490-9975.820ENSJJAG00000015530Gspt19772.168Jaculus_jaculus
ENSGACG00000004490-10081.040ENSKMAG00000006311-10079.865Kryptolebias_marmoratus
ENSGACG00000004490-10089.153ENSKMAG00000021919GSPT110088.983Kryptolebias_marmoratus
ENSGACG00000004490-10089.848ENSLBEG00000001128GSPT110091.032Labrus_bergylta
ENSGACG00000004490-10081.387ENSLBEG00000006458gspt1l10079.492Labrus_bergylta
ENSGACG00000004490-8870.250ENSLACG00000001700GSPT110066.163Latimeria_chalumnae
ENSGACG00000004490-10083.587ENSLOCG00000007431gspt110082.572Lepisosteus_oculatus
ENSGACG00000004490-9875.302ENSLAFG00000032278GSPT110074.324Loxodonta_africana
ENSGACG00000004490-9975.862ENSMFAG00000037675GSPT19375.809Macaca_fascicularis
ENSGACG00000004490-9975.820ENSMMUG00000023178GSPT18691.803Macaca_mulatta
ENSGACG00000004490-9976.339ENSMNEG00000032993GSPT18691.803Macaca_nemestrina
ENSGACG00000004490-8882.308ENSMLEG00000028669GSPT19881.460Mandrillus_leucophaeus
ENSGACG00000004490-10090.186ENSMAMG00000004326GSPT110090.725Mastacembelus_armatus
ENSGACG00000004490-10081.557ENSMAMG00000002821gspt1l10079.427Mastacembelus_armatus
ENSGACG00000004490-10082.095ENSMZEG00005022024gspt1l10080.541Maylandia_zebra
ENSGACG00000004490-10089.696ENSMZEG00005007132-10090.034Maylandia_zebra
ENSGACG00000004490-8980.871ENSMGAG00000000878GSPT19780.943Meleagris_gallopavo
ENSGACG00000004490-7269.789ENSMAUG00000000551Gspt19666.079Mesocricetus_auratus
ENSGACG00000004490-9975.945ENSMICG00000014137GSPT19672.000Microcebus_murinus
ENSGACG00000004490-9976.230ENSMOCG00000019604Gspt19775.658Microtus_ochrogaster
ENSGACG00000004490-7696.583ENSMMOG00000003725GSPT18797.424Mola_mola
ENSGACG00000004490-10079.865ENSMMOG00000009646gspt1l9393.208Mola_mola
ENSGACG00000004490-9874.232ENSMODG00000004728-9975.472Monodelphis_domestica
ENSGACG00000004490-8869.732ENSMODG00000023082-8377.855Monodelphis_domestica
ENSGACG00000004490-10081.049ENSMALG00000003550-10079.483Monopterus_albus
ENSGACG00000004490-10089.661ENSMALG00000009500GSPT110090.169Monopterus_albus
ENSGACG00000004490-10076.020MGP_CAROLIEiJ_G0020458Gspt110072.093Mus_caroli
ENSGACG00000004490-10076.190ENSMUSG00000062203Gspt19972.868Mus_musculus
ENSGACG00000004490-10076.361MGP_PahariEiJ_G0016165Gspt110072.868Mus_pahari
ENSGACG00000004490-10076.190MGP_SPRETEiJ_G0021353Gspt110072.868Mus_spretus
ENSGACG00000004490-8881.905ENSMPUG00000014504GSPT19780.859Mustela_putorius_furo
ENSGACG00000004490-8882.308ENSMLUG00000000792GSPT19781.693Myotis_lucifugus
ENSGACG00000004490-10074.703ENSNGAG00000023220Gspt19772.447Nannospalax_galili
ENSGACG00000004490-10089.661ENSNBRG00000002803GSPT110090.000Neolamprologus_brichardi
ENSGACG00000004490-9975.690ENSNLEG00000010199GSPT18691.803Nomascus_leucogenys
ENSGACG00000004490-9556.228ENSMEUG00000015169-8256.000Notamacropus_eugenii
ENSGACG00000004490-6764.831ENSMEUG00000006697-6271.287Notamacropus_eugenii
ENSGACG00000004490-9774.780ENSOPRG00000014219GSPT18772.131Ochotona_princeps
ENSGACG00000004490-8683.004ENSODEG00000002248-8691.101Octodon_degus
ENSGACG00000004490-7568.764ENSODEG00000011524-8275.910Octodon_degus
ENSGACG00000004490-10082.264ENSONIG00000003456gspt1l10080.372Oreochromis_niloticus
ENSGACG00000004490-10090.000ENSONIG00000019754-10090.339Oreochromis_niloticus
ENSGACG00000004490-6789.844ENSOANG00000009409GSPT110089.844Ornithorhynchus_anatinus
ENSGACG00000004490-9975.559ENSOCUG00000004759GSPT19771.955Oryctolagus_cuniculus
ENSGACG00000004490-10089.340ENSORLG00000002867-10089.848Oryzias_latipes
ENSGACG00000004490-10080.678ENSORLG00000026597gspt1l10080.000Oryzias_latipes
ENSGACG00000004490-10089.848ENSORLG00020006749-10090.355Oryzias_latipes_hni
ENSGACG00000004490-10080.678ENSORLG00020016364gspt1l10080.000Oryzias_latipes_hni
ENSGACG00000004490-10080.339ENSORLG00015008971gspt1l9684.556Oryzias_latipes_hsok
ENSGACG00000004490-10087.458ENSORLG00015005515-10089.669Oryzias_latipes_hsok
ENSGACG00000004490-10086.780ENSOMEG00000008108-10089.153Oryzias_melastigma
ENSGACG00000004490-10079.530ENSOMEG00000002739gspt1l10078.983Oryzias_melastigma
ENSGACG00000004490-9975.000ENSOGAG00000007083GSPT19771.725Otolemur_garnettii
ENSGACG00000004490-9974.914ENSOARG00000007088GSPT19772.581Ovis_aries
ENSGACG00000004490-5175.309ENSPPAG00000028454-6196.078Pan_paniscus
ENSGACG00000004490-8883.172ENSPPRG00000005042GSPT18692.037Panthera_pardus
ENSGACG00000004490-8882.692ENSPTIG00000020265GSPT18692.037Panthera_tigris_altaica
ENSGACG00000004490-9178.439ENSPTRG00000007779-9679.290Pan_troglodytes
ENSGACG00000004490-10075.000ENSPANG00000007630GSPT19673.039Papio_anubis
ENSGACG00000004490-10083.390ENSPKIG00000022644gspt110080.976Paramormyrops_kingsleyae
ENSGACG00000004490-6873.881ENSPKIG00000020492gspt1l6572.099Paramormyrops_kingsleyae
ENSGACG00000004490-8882.592ENSPSIG00000008275GSPT19880.747Pelodiscus_sinensis
ENSGACG00000004490-10077.665ENSPMGG00000003007gspt1l8690.867Periophthalmus_magnuspinnatus
ENSGACG00000004490-10077.966ENSPMGG00000022247GSPT110085.254Periophthalmus_magnuspinnatus
ENSGACG00000004490-10075.042ENSPEMG00000012896Gspt19773.235Peromyscus_maniculatus_bairdii
ENSGACG00000004490-9971.429ENSPCIG00000007435-9870.958Phascolarctos_cinereus
ENSGACG00000004490-9866.441ENSPCIG00000005432-9765.751Phascolarctos_cinereus
ENSGACG00000004490-8882.409ENSPCIG00000026776-9191.803Phascolarctos_cinereus
ENSGACG00000004490-10079.831ENSPFOG00000016035gspt1l10079.322Poecilia_formosa
ENSGACG00000004490-9880.782ENSPFOG00000005224-10083.897Poecilia_formosa
ENSGACG00000004490-6297.458ENSPLAG00000001492-9689.168Poecilia_latipinna
ENSGACG00000004490-6080.833ENSPLAG00000007443GSPT15792.553Poecilia_latipinna
ENSGACG00000004490-10080.000ENSPMEG00000022359gspt1l10079.492Poecilia_mexicana
ENSGACG00000004490-7497.658ENSPMEG00000007020-10090.339Poecilia_mexicana
ENSGACG00000004490-8690.945ENSPREG00000016668-9991.079Poecilia_reticulata
ENSGACG00000004490-9880.345ENSPREG00000008023gspt1l8978.657Poecilia_reticulata
ENSGACG00000004490-9974.660ENSPPYG00000007114GSPT18972.115Pongo_abelii
ENSGACG00000004490-9965.501ENSPCAG00000011379GSPT16080.796Procavia_capensis
ENSGACG00000004490-9975.129ENSPCOG00000013204GSPT18585.012Propithecus_coquereli
ENSGACG00000004490-9975.086ENSPVAG00000005009GSPT18772.320Pteropus_vampyrus
ENSGACG00000004490-10082.095ENSPNYG00000010474gspt1l10080.541Pundamilia_nyererei
ENSGACG00000004490-10089.492ENSPNYG00000002903-9992.520Pundamilia_nyererei
ENSGACG00000004490-10080.000ENSPNAG00000011819gspt110078.814Pygocentrus_nattereri
ENSGACG00000004490-10080.872ENSPNAG00000002605gspt1l10079.381Pygocentrus_nattereri
ENSGACG00000004490-10075.763ENSRNOG00000046271LOC1009116859375.763Rattus_norvegicus
ENSGACG00000004490-8882.692ENSRBIG00000039784GSPT19881.299Rhinopithecus_bieti
ENSGACG00000004490-8882.979ENSRROG00000031350GSPT18691.803Rhinopithecus_roxellana
ENSGACG00000004490-8882.308ENSSBOG00000017761GSPT19881.657Saimiri_boliviensis_boliviensis
ENSGACG00000004490-8780.507ENSSHAG00000002700-7290.632Sarcophilus_harrisii
ENSGACG00000004490-8883.366ENSSHAG00000005908-8886.910Sarcophilus_harrisii
ENSGACG00000004490-10079.595ENSSFOG00015014731-10078.583Scleropages_formosus
ENSGACG00000004490-10084.407ENSSFOG00015011277gspt110082.712Scleropages_formosus
ENSGACG00000004490-10082.403ENSSMAG00000014782gspt1l10079.764Scophthalmus_maximus
ENSGACG00000004490-10092.411ENSSMAG00000007886GSPT110092.243Scophthalmus_maximus
ENSGACG00000004490-7597.685ENSSDUG00000008404GSPT110091.525Seriola_dumerili
ENSGACG00000004490-10081.726ENSSDUG00000016908gspt1l10079.795Seriola_dumerili
ENSGACG00000004490-10091.356ENSSLDG00000008363GSPT110091.695Seriola_lalandi_dorsalis
ENSGACG00000004490-10082.064ENSSLDG00000009000gspt1l10080.137Seriola_lalandi_dorsalis
ENSGACG00000004490-6769.555ENSSARG00000013461-6766.901Sorex_araneus
ENSGACG00000004490-6684.127ENSSPUG00000007536GSPT16484.127Sphenodon_punctatus
ENSGACG00000004490-10081.650ENSSPAG00000011542gspt1l10079.764Stegastes_partitus
ENSGACG00000004490-10090.339ENSSPAG00000004622-10091.017Stegastes_partitus
ENSGACG00000004490-8692.520ENSSPAG00000009785-9993.701Stegastes_partitus
ENSGACG00000004490-9975.086ENSSSCG00000021118GSPT19672.419Sus_scrofa
ENSGACG00000004490-8980.871ENSTGUG00000005103GSPT19780.747Taeniopygia_guttata
ENSGACG00000004490-10078.559ENSTRUG00000012645gspt1l10077.327Takifugu_rubripes
ENSGACG00000004490-7196.049ENSTRUG00000016971-10096.049Takifugu_rubripes
ENSGACG00000004490-8681.395ENSTNIG00000010212gspt1l9286.393Tetraodon_nigroviridis
ENSGACG00000004490-10082.513ENSTNIG00000012926GSPT110082.513Tetraodon_nigroviridis
ENSGACG00000004490-5177.333ENSTBEG00000008873-5575.261Tupaia_belangeri
ENSGACG00000004490-9975.086ENSTTRG00000011630GSPT18771.774Tursiops_truncatus
ENSGACG00000004490-8781.748ENSUAMG00000004460GSPT18589.930Ursus_americanus
ENSGACG00000004490-8882.885ENSUMAG00000004033GSPT19980.040Ursus_maritimus
ENSGACG00000004490-8882.785ENSVPAG00000006903GSPT18775.812Vicugna_pacos
ENSGACG00000004490-8882.692ENSVVUG00000018198GSPT19481.460Vulpes_vulpes
ENSGACG00000004490-9674.177ENSXETG00000005540gspt19873.462Xenopus_tropicalis
ENSGACG00000004490-10085.254ENSXCOG00000003084-10086.949Xiphophorus_couchianus
ENSGACG00000004490-8580.588ENSXCOG00000016099gspt1l9385.558Xiphophorus_couchianus
ENSGACG00000004490-10080.705ENSXMAG00000007284gspt1l10079.661Xiphophorus_maculatus
ENSGACG00000004490-10088.814ENSXMAG00000022050-10090.339Xiphophorus_maculatus

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