EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004609 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: La ribonucleoprotein domain family%2C member 1B
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 14122 bases
Position: chrgroupXV:718130-732251
Accession: ZDB-GENE-030131-4154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006092	La	PF05383.17	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006114	-	447	-	ENSGACP00000006097	149 (aa)	-	G3NL84
ENSGACT00000006102	-	1273	-	ENSGACP00000006085	415 (aa)	-	G3NL72
ENSGACT00000006109	-	3668	-	ENSGACP00000006092	1078 (aa)	-	G3NL79

Gene Model

Click here to download ENSGACG00000004609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004609	larp1b	88	52.761	ENSG00000138709	LARP1B	97	52.086	Homo_sapiens
ENSGACG00000004609	larp1b	100	71.162	ENSAPOG00000020101	larp1b	100	70.275	Acanthochromis_polyacanthus
ENSGACG00000004609	larp1b	52	49.310	ENSAMEG00000002748	LARP1B	99	46.805	Ailuropoda_melanoleuca
ENSGACG00000004609	larp1b	100	65.299	ENSACIG00000023890	larp1b	100	63.986	Amphilophus_citrinellus
ENSGACG00000004609	larp1b	89	65.248	ENSAOCG00000014268	larp1b	98	64.235	Amphiprion_ocellaris
ENSGACG00000004609	larp1b	100	71.975	ENSAPEG00000004126	larp1b	100	70.730	Amphiprion_percula
ENSGACG00000004609	larp1b	100	72.558	ENSATEG00000017849	larp1b	100	70.971	Anabas_testudineus
ENSGACG00000004609	larp1b	83	53.797	ENSAPLG00000010129	LARP1B	75	61.007	Anas_platyrhynchos
ENSGACG00000004609	larp1b	84	53.651	ENSACAG00000011338	LARP1B	95	51.663	Anolis_carolinensis
ENSGACG00000004609	larp1b	63	50.559	ENSANAG00000034618	LARP1B	83	49.441	Aotus_nancymaae
ENSGACG00000004609	larp1b	100	69.373	ENSACLG00000011948	larp1b	100	68.519	Astatotilapia_calliptera
ENSGACG00000004609	larp1b	93	53.314	ENSAMXG00000006805	larp1b	91	51.434	Astyanax_mexicanus
ENSGACG00000004609	larp1b	85	56.536	ENSBTAG00000012135	LARP1B	98	48.000	Bos_taurus
ENSGACG00000004609	larp1b	83	55.303	ENSCJAG00000003338	LARP1B	99	53.182	Callithrix_jacchus
ENSGACG00000004609	larp1b	85	54.631	ENSCAFG00000003831	LARP1B	92	60.313	Canis_familiaris
ENSGACG00000004609	larp1b	85	54.012	ENSCAFG00020018899	LARP1B	99	51.235	Canis_lupus_dingo
ENSGACG00000004609	larp1b	82	55.905	ENSCHIG00000023144	LARP1B	95	52.986	Capra_hircus
ENSGACG00000004609	larp1b	83	54.759	ENSCCAG00000021948	LARP1B	98	52.406	Cebus_capucinus
ENSGACG00000004609	larp1b	83	53.929	ENSCATG00000013541	LARP1B	97	51.453	Cercocebus_atys
ENSGACG00000004609	larp1b	83	53.797	ENSCSAG00000003582	LARP1B	97	53.205	Chlorocebus_sabaeus
ENSGACG00000004609	larp1b	71	56.549	ENSCHOG00000005354	LARP1B	76	56.865	Choloepus_hoffmanni
ENSGACG00000004609	larp1b	93	52.363	ENSCPBG00000017480	LARP1B	95	51.495	Chrysemys_picta_bellii
ENSGACG00000004609	larp1b	83	53.011	ENSCANG00000026958	LARP1B	79	59.306	Colobus_angolensis_palliatus
ENSGACG00000004609	larp1b	100	66.171	ENSCSEG00000013519	larp1b	100	66.608	Cynoglossus_semilaevis
ENSGACG00000004609	larp1b	100	67.556	ENSCVAG00000005046	larp1b	100	66.133	Cyprinodon_variegatus
ENSGACG00000004609	larp1b	98	55.122	ENSDARG00000061169	larp1b	94	54.801	Danio_rerio
ENSGACG00000004609	larp1b	74	52.754	ENSETEG00000012497	LARP1B	86	51.014	Echinops_telfairi
ENSGACG00000004609	larp1b	85	53.902	ENSEASG00005018106	LARP1B	99	51.241	Equus_asinus_asinus
ENSGACG00000004609	larp1b	87	54.330	ENSECAG00000001088	LARP1B	88	50.893	Equus_caballus
ENSGACG00000004609	larp1b	65	60.536	ENSELUG00000023774	larp1b	72	59.549	Esox_lucius
ENSGACG00000004609	larp1b	86	49.948	ENSFALG00000008098	LARP1B	100	49.324	Ficedula_albicollis
ENSGACG00000004609	larp1b	100	70.062	ENSFHEG00000010264	larp1b	97	68.556	Fundulus_heteroclitus
ENSGACG00000004609	larp1b	94	72.026	ENSGMOG00000005207	larp1b	95	70.418	Gadus_morhua
ENSGACG00000004609	larp1b	87	53.333	ENSGALG00000010207	LARP1B	91	50.720	Gallus_gallus
ENSGACG00000004609	larp1b	86	72.357	ENSGAFG00000012012	larp1b	99	69.704	Gambusia_affinis
ENSGACG00000004609	larp1b	88	55.036	ENSGAGG00000017209	LARP1B	91	52.490	Gopherus_agassizii
ENSGACG00000004609	larp1b	83	54.332	ENSGGOG00000015900	LARP1B	97	51.979	Gorilla_gorilla
ENSGACG00000004609	larp1b	100	69.965	ENSHBUG00000009730	larp1b	100	68.844	Haplochromis_burtoni
ENSGACG00000004609	larp1b	67	75.103	ENSHCOG00000000918	larp1b	99	73.800	Hippocampus_comes
ENSGACG00000004609	larp1b	73	62.149	ENSIPUG00000012138	larp1b	69	62.549	Ictalurus_punctatus
ENSGACG00000004609	larp1b	92	70.927	ENSKMAG00000011589	larp1b	95	70.331	Kryptolebias_marmoratus
ENSGACG00000004609	larp1b	100	72.518	ENSLBEG00000005655	larp1b	100	72.340	Labrus_bergylta
ENSGACG00000004609	larp1b	91	55.382	ENSLACG00000015247	LARP1B	90	54.028	Latimeria_chalumnae
ENSGACG00000004609	larp1b	87	58.142	ENSLOCG00000010684	larp1b	97	56.487	Lepisosteus_oculatus
ENSGACG00000004609	larp1b	83	54.759	ENSMFAG00000002218	LARP1B	97	52.406	Macaca_fascicularis
ENSGACG00000004609	larp1b	83	54.759	ENSMMUG00000021347	LARP1B	97	52.422	Macaca_mulatta
ENSGACG00000004609	larp1b	63	60.200	ENSMNEG00000030406	LARP1B	95	58.046	Macaca_nemestrina
ENSGACG00000004609	larp1b	83	53.714	ENSMLEG00000009306	LARP1B	78	59.444	Mandrillus_leucophaeus
ENSGACG00000004609	larp1b	99	71.262	ENSMAMG00000000081	larp1b	99	72.287	Mastacembelus_armatus
ENSGACG00000004609	larp1b	70	73.582	ENSMZEG00005002545	larp1b	96	72.914	Maylandia_zebra
ENSGACG00000004609	larp1b	82	50.269	ENSMGAG00000004809	LARP1B	74	55.900	Meleagris_gallopavo
ENSGACG00000004609	larp1b	83	56.536	ENSMICG00000036111	LARP1B	97	53.813	Microcebus_murinus
ENSGACG00000004609	larp1b	87	54.195	ENSMODG00000012300	LARP1B	89	51.973	Monodelphis_domestica
ENSGACG00000004609	larp1b	100	71.695	ENSMALG00000003638	larp1b	100	70.630	Monopterus_albus
ENSGACG00000004609	larp1b	89	53.134	ENSMPUG00000017365	LARP1B	88	50.692	Mustela_putorius_furo
ENSGACG00000004609	larp1b	84	52.972	ENSMLUG00000010229	LARP1B	99	50.637	Myotis_lucifugus
ENSGACG00000004609	larp1b	88	68.010	ENSNBRG00000023846	larp1b	96	66.880	Neolamprologus_brichardi
ENSGACG00000004609	larp1b	83	53.846	ENSNLEG00000013819	LARP1B	97	51.496	Nomascus_leucogenys
ENSGACG00000004609	larp1b	62	58.003	ENSMEUG00000010308	LARP1B	74	55.947	Notamacropus_eugenii
ENSGACG00000004609	larp1b	76	50.237	ENSOPRG00000005478	LARP1B	81	55.804	Ochotona_princeps
ENSGACG00000004609	larp1b	88	73.620	ENSONIG00000012386	larp1b	100	71.779	Oreochromis_niloticus
ENSGACG00000004609	larp1b	83	53.813	ENSOCUG00000013330	LARP1B	96	51.307	Oryctolagus_cuniculus
ENSGACG00000004609	larp1b	97	67.315	ENSORLG00000017954	larp1b	100	66.578	Oryzias_latipes
ENSGACG00000004609	larp1b	98	66.667	ENSORLG00020013081	larp1b	100	66.578	Oryzias_latipes_hni
ENSGACG00000004609	larp1b	98	66.486	ENSORLG00015009580	larp1b	100	66.548	Oryzias_latipes_hsok
ENSGACG00000004609	larp1b	97	68.831	ENSOMEG00000004210	larp1b	100	68.053	Oryzias_melastigma
ENSGACG00000004609	larp1b	83	54.565	ENSOGAG00000005771	LARP1B	100	52.826	Otolemur_garnettii
ENSGACG00000004609	larp1b	83	55.269	ENSOARG00000015300	LARP1B	97	52.371	Ovis_aries
ENSGACG00000004609	larp1b	83	54.439	ENSPPAG00000030439	LARP1B	97	52.299	Pan_paniscus
ENSGACG00000004609	larp1b	83	54.439	ENSPTRG00000016437	LARP1B	97	52.086	Pan_troglodytes
ENSGACG00000004609	larp1b	83	54.790	ENSPANG00000012488	LARP1B	97	52.422	Papio_anubis
ENSGACG00000004609	larp1b	79	60.405	ENSPKIG00000014360	larp1b	89	59.824	Paramormyrops_kingsleyae
ENSGACG00000004609	larp1b	87	54.735	ENSPSIG00000012885	LARP1B	99	51.643	Pelodiscus_sinensis
ENSGACG00000004609	larp1b	73	68.434	ENSPMGG00000007207	larp1b	92	66.329	Periophthalmus_magnuspinnatus
ENSGACG00000004609	larp1b	62	55.119	ENSPMAG00000002700	larp1b	99	50.605	Petromyzon_marinus
ENSGACG00000004609	larp1b	73	66.034	ENSPCIG00000026516	LARP1B	95	60.137	Phascolarctos_cinereus
ENSGACG00000004609	larp1b	100	68.549	ENSPFOG00000019519	larp1b	100	67.509	Poecilia_formosa
ENSGACG00000004609	larp1b	62	65.223	ENSPFOG00000022837	-	99	64.698	Poecilia_formosa
ENSGACG00000004609	larp1b	100	68.777	ENSPLAG00000007115	larp1b	100	67.725	Poecilia_latipinna
ENSGACG00000004609	larp1b	100	69.319	ENSPMEG00000001224	larp1b	100	68.407	Poecilia_mexicana
ENSGACG00000004609	larp1b	83	53.433	ENSPCAG00000007546	LARP1B	97	50.644	Procavia_capensis
ENSGACG00000004609	larp1b	73	69.492	ENSPCOG00000021874	LARP1B	96	69.492	Propithecus_coquereli
ENSGACG00000004609	larp1b	83	52.620	ENSPVAG00000005373	LARP1B	97	51.201	Pteropus_vampyrus
ENSGACG00000004609	larp1b	70	74.807	ENSPNYG00000017357	larp1b	96	73.480	Pundamilia_nyererei
ENSGACG00000004609	larp1b	89	57.816	ENSPNAG00000008823	larp1b	92	54.002	Pygocentrus_nattereri
ENSGACG00000004609	larp1b	83	54.759	ENSRROG00000030771	LARP1B	97	52.406	Rhinopithecus_roxellana
ENSGACG00000004609	larp1b	62	50.570	ENSSHAG00000014474	LARP1B	99	49.640	Sarcophilus_harrisii
ENSGACG00000004609	larp1b	84	77.413	ENSSMAG00000006347	larp1b	98	73.108	Scophthalmus_maximus
ENSGACG00000004609	larp1b	100	73.592	ENSSDUG00000004182	larp1b	100	72.599	Seriola_dumerili
ENSGACG00000004609	larp1b	91	72.895	ENSSLDG00000014613	larp1b	98	74.019	Seriola_lalandi_dorsalis
ENSGACG00000004609	larp1b	83	53.032	ENSSPUG00000011837	LARP1B	87	62.994	Sphenodon_punctatus
ENSGACG00000004609	larp1b	100	72.173	ENSSPAG00000017772	larp1b	100	71.290	Stegastes_partitus
ENSGACG00000004609	larp1b	87	54.286	ENSSSCG00000034280	LARP1B	99	68.817	Sus_scrofa
ENSGACG00000004609	larp1b	67	59.041	ENSTGUG00000002098	-	84	58.231	Taeniopygia_guttata
ENSGACG00000004609	larp1b	99	69.910	ENSTRUG00000005612	larp1b	99	69.099	Takifugu_rubripes
ENSGACG00000004609	larp1b	88	72.156	ENSTNIG00000012398	larp1b	100	71.956	Tetraodon_nigroviridis
ENSGACG00000004609	larp1b	61	50.290	ENSTBEG00000004177	LARP1B	74	49.713	Tupaia_belangeri
ENSGACG00000004609	larp1b	75	54.599	ENSTTRG00000012984	LARP1B	89	53.357	Tursiops_truncatus
ENSGACG00000004609	larp1b	83	56.004	ENSUMAG00000007373	LARP1B	96	53.166	Ursus_maritimus
ENSGACG00000004609	larp1b	59	72.727	ENSVPAG00000007223	LARP1B	70	72.727	Vicugna_pacos
ENSGACG00000004609	larp1b	85	54.717	ENSVVUG00000011307	LARP1B	99	52.344	Vulpes_vulpes
ENSGACG00000004609	larp1b	90	48.332	ENSXETG00000022512	larp1b	94	47.231	Xenopus_tropicalis
ENSGACG00000004609	larp1b	77	69.945	ENSXCOG00000004435	larp1b	88	69.391	Xiphophorus_couchianus
ENSGACG00000004609	larp1b	100	69.183	ENSXMAG00000008150	larp1b	100	68.430	Xiphophorus_maculatus