EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004642 (Gene tree)
Gene ID: -
Gene Symbol: ubr5
Alias: edd1|wu:fa16c12
Full Name: ubiquitin protein ligase E3 component n-recognin 5
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 25759 bases
Position: chrgroupXX:2553613-2579371
Accession: ZDB-GENE-030131-6559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006213	PABP	PF00658.18	5.4e-20	1	1
ENSGACP00000006187	PABP	PF00658.18	9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006230	-	5388	-	ENSGACP00000006213	1795 (aa)	-	G3NLK0
ENSGACT00000006204	-	8310	-	ENSGACP00000006187	2770 (aa)	-	G3NLH4

Gene Model

Click here to download ENSGACG00000004642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004642	ubr5	100	89.069	ENSG00000104517	UBR5	100	88.425	Homo_sapiens
ENSGACG00000004642	ubr5	100	96.769	ENSAPOG00000007770	ubr5	99	95.518	Acanthochromis_polyacanthus
ENSGACG00000004642	ubr5	100	89.041	ENSAMEG00000014808	UBR5	99	88.861	Ailuropoda_melanoleuca
ENSGACG00000004642	ubr5	100	96.894	ENSACIG00000003786	ubr5	100	96.708	Amphilophus_citrinellus
ENSGACG00000004642	ubr5	100	95.822	ENSAPEG00000007895	ubr5	100	96.226	Amphiprion_percula
ENSGACG00000004642	ubr5	100	97.103	ENSATEG00000024796	ubr5	100	97.052	Anabas_testudineus
ENSGACG00000004642	ubr5	100	89.193	ENSAPLG00000004191	UBR5	100	88.797	Anas_platyrhynchos
ENSGACG00000004642	ubr5	100	88.366	ENSACAG00000008995	UBR5	100	88.018	Anolis_carolinensis
ENSGACG00000004642	ubr5	100	88.745	ENSANAG00000032305	UBR5	99	88.745	Aotus_nancymaae
ENSGACG00000004642	ubr5	100	96.751	ENSACLG00000011122	ubr5	99	95.680	Astatotilapia_calliptera
ENSGACG00000004642	ubr5	100	93.426	ENSAMXG00000020014	ubr5	100	93.674	Astyanax_mexicanus
ENSGACG00000004642	ubr5	100	88.805	ENSBTAG00000021209	UBR5	99	88.805	Bos_taurus
ENSGACG00000004642	ubr5	100	88.809	ENSCJAG00000015960	UBR5	99	88.809	Callithrix_jacchus
ENSGACG00000004642	ubr5	100	88.841	ENSCAFG00000000619	UBR5	100	88.860	Canis_familiaris
ENSGACG00000004642	ubr5	100	88.741	ENSCAFG00020000901	UBR5	99	88.525	Canis_lupus_dingo
ENSGACG00000004642	ubr5	100	88.733	ENSCHIG00000020937	UBR5	99	88.733	Capra_hircus
ENSGACG00000004642	ubr5	100	89.105	ENSTSYG00000011411	UBR5	99	89.105	Carlito_syrichta
ENSGACG00000004642	ubr5	100	82.789	ENSCPOG00000009637	UBR5	100	82.228	Cavia_porcellus
ENSGACG00000004642	ubr5	100	88.877	ENSCCAG00000037120	UBR5	99	88.877	Cebus_capucinus
ENSGACG00000004642	ubr5	100	88.781	ENSCATG00000035969	UBR5	99	88.781	Cercocebus_atys
ENSGACG00000004642	ubr5	100	88.082	ENSCLAG00000005604	UBR5	99	88.993	Chinchilla_lanigera
ENSGACG00000004642	ubr5	100	89.073	ENSCSAG00000011959	UBR5	99	89.073	Chlorocebus_sabaeus
ENSGACG00000004642	ubr5	87	95.455	ENSCHOG00000013701	UBR5	87	95.455	Choloepus_hoffmanni
ENSGACG00000004642	ubr5	100	88.913	ENSCPBG00000026166	UBR5	99	88.913	Chrysemys_picta_bellii
ENSGACG00000004642	ubr5	54	40.970	ENSCING00000008630	-	99	40.693	Ciona_intestinalis
ENSGACG00000004642	ubr5	100	88.525	ENSCANG00000041171	UBR5	100	88.877	Colobus_angolensis_palliatus
ENSGACG00000004642	ubr5	97	90.494	ENSCGRG00001002960	Ubr5	99	83.423	Cricetulus_griseus_chok1gshd
ENSGACG00000004642	ubr5	100	85.083	ENSCGRG00000005867	Ubr5	99	84.632	Cricetulus_griseus_crigri
ENSGACG00000004642	ubr5	100	95.925	ENSCSEG00000008448	ubr5	97	95.004	Cynoglossus_semilaevis
ENSGACG00000004642	ubr5	100	95.543	ENSCVAG00000021987	ubr5	100	95.714	Cyprinodon_variegatus
ENSGACG00000004642	ubr5	100	93.983	ENSDARG00000018192	ubr5	99	93.815	Danio_rerio
ENSGACG00000004642	ubr5	100	86.858	ENSDNOG00000007897	UBR5	99	86.463	Dasypus_novemcinctus
ENSGACG00000004642	ubr5	100	88.255	ENSDORG00000007058	Ubr5	99	88.661	Dipodomys_ordii
ENSGACG00000004642	ubr5	92	52.640	FBgn0002431	hyd	93	53.514	Drosophila_melanogaster
ENSGACG00000004642	ubr5	88	84.720	ENSETEG00000020339	UBR5	76	92.537	Echinops_telfairi
ENSGACG00000004642	ubr5	100	88.849	ENSEASG00005001629	UBR5	99	88.849	Equus_asinus_asinus
ENSGACG00000004642	ubr5	100	88.636	ENSECAG00000015755	UBR5	100	88.863	Equus_caballus
ENSGACG00000004642	ubr5	100	95.989	ENSELUG00000005362	ubr5	100	95.410	Esox_lucius
ENSGACG00000004642	ubr5	100	88.877	ENSFCAG00000011214	UBR5	99	88.877	Felis_catus
ENSGACG00000004642	ubr5	100	89.394	ENSFALG00000005901	UBR5	99	89.394	Ficedula_albicollis
ENSGACG00000004642	ubr5	100	88.557	ENSFDAG00000014793	UBR5	99	88.599	Fukomys_damarensis
ENSGACG00000004642	ubr5	100	95.989	ENSFHEG00000019770	ubr5	100	95.873	Fundulus_heteroclitus
ENSGACG00000004642	ubr5	100	95.784	ENSGMOG00000018440	ubr5	100	95.856	Gadus_morhua
ENSGACG00000004642	ubr5	99	87.473	ENSGALG00000031282	UBR5	99	87.509	Gallus_gallus
ENSGACG00000004642	ubr5	100	88.261	ENSGGOG00000003058	UBR5	99	88.669	Gorilla_gorilla
ENSGACG00000004642	ubr5	100	97.493	ENSHBUG00000021803	ubr5	100	97.410	Haplochromis_burtoni
ENSGACG00000004642	ubr5	100	88.805	ENSHGLG00000010405	UBR5	99	88.805	Heterocephalus_glaber_female
ENSGACG00000004642	ubr5	100	87.257	ENSHGLG00100004167	UBR5	99	87.401	Heterocephalus_glaber_male
ENSGACG00000004642	ubr5	100	95.831	ENSHCOG00000014022	ubr5	100	95.722	Hippocampus_comes
ENSGACG00000004642	ubr5	100	92.368	ENSIPUG00000023090	ubr5	100	92.763	Ictalurus_punctatus
ENSGACG00000004642	ubr5	100	88.961	ENSSTOG00000005328	UBR5	99	88.961	Ictidomys_tridecemlineatus
ENSGACG00000004642	ubr5	100	88.589	ENSJJAG00000013619	Ubr5	99	88.589	Jaculus_jaculus
ENSGACG00000004642	ubr5	100	96.546	ENSKMAG00000001452	ubr5	99	94.919	Kryptolebias_marmoratus
ENSGACG00000004642	ubr5	100	94.879	ENSLBEG00000024613	ubr5	99	93.862	Labrus_bergylta
ENSGACG00000004642	ubr5	100	88.833	ENSLACG00000012137	UBR5	99	88.689	Latimeria_chalumnae
ENSGACG00000004642	ubr5	100	91.455	ENSLOCG00000009882	ubr5	99	91.598	Lepisosteus_oculatus
ENSGACG00000004642	ubr5	51	87.135	ENSLAFG00000026912	-	100	87.541	Loxodonta_africana
ENSGACG00000004642	ubr5	100	88.881	ENSMFAG00000044216	UBR5	99	88.881	Macaca_fascicularis
ENSGACG00000004642	ubr5	100	89.141	ENSMMUG00000020766	UBR5	99	89.141	Macaca_mulatta
ENSGACG00000004642	ubr5	100	88.845	ENSMNEG00000028834	UBR5	99	88.845	Macaca_nemestrina
ENSGACG00000004642	ubr5	100	88.881	ENSMLEG00000039922	UBR5	99	88.881	Mandrillus_leucophaeus
ENSGACG00000004642	ubr5	100	97.437	ENSMZEG00005025460	ubr5	100	97.444	Maylandia_zebra
ENSGACG00000004642	ubr5	100	88.372	ENSMGAG00000012296	-	99	88.678	Meleagris_gallopavo
ENSGACG00000004642	ubr5	100	87.941	ENSMAUG00000018902	Ubr5	99	87.941	Mesocricetus_auratus
ENSGACG00000004642	ubr5	100	88.773	ENSMICG00000014824	UBR5	99	88.773	Microcebus_murinus
ENSGACG00000004642	ubr5	100	88.337	ENSMOCG00000019809	Ubr5	99	88.337	Microtus_ochrogaster
ENSGACG00000004642	ubr5	100	96.546	ENSMMOG00000018266	ubr5	100	94.809	Mola_mola
ENSGACG00000004642	ubr5	100	88.665	ENSMODG00000005976	UBR5	100	88.665	Monodelphis_domestica
ENSGACG00000004642	ubr5	100	96.156	ENSMALG00000008018	ubr5	100	96.190	Monopterus_albus
ENSGACG00000004642	ubr5	100	88.121	MGP_CAROLIEiJ_G0019748	Ubr5	99	88.121	Mus_caroli
ENSGACG00000004642	ubr5	100	88.420	ENSMUSG00000037487	Ubr5	99	88.420	Mus_musculus
ENSGACG00000004642	ubr5	100	88.488	MGP_PahariEiJ_G0019757	Ubr5	99	88.488	Mus_pahari
ENSGACG00000004642	ubr5	100	88.301	MGP_SPRETEiJ_G0020645	Ubr5	99	88.301	Mus_spretus
ENSGACG00000004642	ubr5	100	88.525	ENSMPUG00000015136	UBR5	100	88.954	Mustela_putorius_furo
ENSGACG00000004642	ubr5	100	88.809	ENSMLUG00000008052	UBR5	100	88.413	Myotis_lucifugus
ENSGACG00000004642	ubr5	100	88.841	ENSNGAG00000001915	Ubr5	99	88.841	Nannospalax_galili
ENSGACG00000004642	ubr5	100	97.493	ENSNBRG00000001982	ubr5	100	96.678	Neolamprologus_brichardi
ENSGACG00000004642	ubr5	100	88.415	ENSNLEG00000003404	UBR5	100	88.769	Nomascus_leucogenys
ENSGACG00000004642	ubr5	74	93.249	ENSMEUG00000004964	-	70	85.821	Notamacropus_eugenii
ENSGACG00000004642	ubr5	80	98.639	ENSOPRG00000004459	UBR5	82	98.639	Ochotona_princeps
ENSGACG00000004642	ubr5	100	88.697	ENSODEG00000001200	UBR5	99	88.697	Octodon_degus
ENSGACG00000004642	ubr5	100	97.336	ENSONIG00000016431	ubr5	99	97.336	Oreochromis_niloticus
ENSGACG00000004642	ubr5	100	88.636	ENSOANG00000013340	-	100	89.190	Ornithorhynchus_anatinus
ENSGACG00000004642	ubr5	100	87.818	ENSOCUG00000008549	UBR5	98	87.392	Oryctolagus_cuniculus
ENSGACG00000004642	ubr5	100	95.760	ENSORLG00000003009	ubr5	99	94.625	Oryzias_latipes
ENSGACG00000004642	ubr5	100	96.325	ENSORLG00020022466	ubr5	100	96.388	Oryzias_latipes_hni
ENSGACG00000004642	ubr5	100	96.659	ENSORLG00015012347	ubr5	99	95.477	Oryzias_latipes_hsok
ENSGACG00000004642	ubr5	90	95.453	ENSOMEG00000014794	ubr5	99	95.453	Oryzias_melastigma
ENSGACG00000004642	ubr5	100	88.557	ENSOGAG00000004491	UBR5	99	88.557	Otolemur_garnettii
ENSGACG00000004642	ubr5	100	88.925	ENSOARG00000017554	UBR5	98	88.925	Ovis_aries
ENSGACG00000004642	ubr5	100	87.324	ENSPPAG00000040534	UBR5	99	87.757	Pan_paniscus
ENSGACG00000004642	ubr5	100	88.581	ENSPPRG00000001290	UBR5	100	89.065	Panthera_pardus
ENSGACG00000004642	ubr5	100	88.581	ENSPTIG00000016223	UBR5	99	88.297	Panthera_tigris_altaica
ENSGACG00000004642	ubr5	100	88.841	ENSPTRG00000020482	UBR5	99	88.841	Pan_troglodytes
ENSGACG00000004642	ubr5	100	89.073	ENSPANG00000017236	UBR5	99	89.073	Papio_anubis
ENSGACG00000004642	ubr5	100	85.961	ENSPKIG00000016015	UBR5	100	84.664	Paramormyrops_kingsleyae
ENSGACG00000004642	ubr5	92	89.474	ENSPKIG00000005940	ubr5	99	88.636	Paramormyrops_kingsleyae
ENSGACG00000004642	ubr5	100	88.861	ENSPSIG00000013244	UBR5	100	88.681	Pelodiscus_sinensis
ENSGACG00000004642	ubr5	100	92.682	ENSPMGG00000022205	ubr5	99	92.754	Periophthalmus_magnuspinnatus
ENSGACG00000004642	ubr5	100	88.314	ENSPEMG00000020823	Ubr5	99	88.457	Peromyscus_maniculatus_bairdii
ENSGACG00000004642	ubr5	100	95.288	ENSPFOG00000012957	ubr5	100	95.421	Poecilia_formosa
ENSGACG00000004642	ubr5	100	95.655	ENSPLAG00000008530	ubr5	100	95.559	Poecilia_latipinna
ENSGACG00000004642	ubr5	99	95.067	ENSPMEG00000019322	ubr5	100	93.832	Poecilia_mexicana
ENSGACG00000004642	ubr5	100	95.288	ENSPREG00000016584	ubr5	99	94.468	Poecilia_reticulata
ENSGACG00000004642	ubr5	97	89.065	ENSPPYG00000018797	UBR5	99	89.065	Pongo_abelii
ENSGACG00000004642	ubr5	87	89.161	ENSPCAG00000001160	UBR5	80	89.427	Procavia_capensis
ENSGACG00000004642	ubr5	100	87.662	ENSPCOG00000014399	UBR5	99	87.662	Propithecus_coquereli
ENSGACG00000004642	ubr5	90	98.639	ENSPVAG00000012646	UBR5	89	98.639	Pteropus_vampyrus
ENSGACG00000004642	ubr5	100	97.493	ENSPNYG00000004164	ubr5	100	97.130	Pundamilia_nyererei
ENSGACG00000004642	ubr5	100	91.643	ENSPNAG00000001318	ubr5	100	92.338	Pygocentrus_nattereri
ENSGACG00000004642	ubr5	100	87.916	ENSRNOG00000006816	Ubr5	100	86.560	Rattus_norvegicus
ENSGACG00000004642	ubr5	100	85.105	ENSRBIG00000038821	UBR5	100	86.031	Rhinopithecus_bieti
ENSGACG00000004642	ubr5	100	88.033	ENSRROG00000040919	UBR5	99	87.895	Rhinopithecus_roxellana
ENSGACG00000004642	ubr5	100	88.809	ENSSBOG00000025123	UBR5	99	88.809	Saimiri_boliviensis_boliviensis
ENSGACG00000004642	ubr5	100	88.785	ENSSHAG00000017701	UBR5	99	88.605	Sarcophilus_harrisii
ENSGACG00000004642	ubr5	100	90.919	ENSSFOG00015003412	ubr5	100	90.916	Scleropages_formosus
ENSGACG00000004642	ubr5	100	97.216	ENSSMAG00000010194	ubr5	100	95.363	Scophthalmus_maximus
ENSGACG00000004642	ubr5	100	97.549	ENSSDUG00000008072	ubr5	100	97.247	Seriola_dumerili
ENSGACG00000004642	ubr5	100	97.549	ENSSLDG00000013014	ubr5	100	97.208	Seriola_lalandi_dorsalis
ENSGACG00000004642	ubr5	91	95.455	ENSSARG00000000171	UBR5	91	95.455	Sorex_araneus
ENSGACG00000004642	ubr5	100	97.772	ENSSPAG00000015131	ubr5	100	96.434	Stegastes_partitus
ENSGACG00000004642	ubr5	100	89.069	ENSSSCG00000022479	UBR5	100	88.994	Sus_scrofa
ENSGACG00000004642	ubr5	100	89.041	ENSTGUG00000012099	UBR5	100	89.041	Taeniopygia_guttata
ENSGACG00000004642	ubr5	100	95.650	ENSTRUG00000010399	ubr5	100	95.359	Takifugu_rubripes
ENSGACG00000004642	ubr5	100	89.611	ENSTNIG00000013292	ubr5	100	91.505	Tetraodon_nigroviridis
ENSGACG00000004642	ubr5	89	100.000	ENSTBEG00000015656	UBR5	89	100.000	Tupaia_belangeri
ENSGACG00000004642	ubr5	86	91.270	ENSTTRG00000000492	UBR5	86	91.270	Tursiops_truncatus
ENSGACG00000004642	ubr5	100	88.586	ENSUMAG00000017960	UBR5	100	88.396	Ursus_maritimus
ENSGACG00000004642	ubr5	91	90.840	ENSVPAG00000008376	UBR5	94	90.840	Vicugna_pacos
ENSGACG00000004642	ubr5	100	88.525	ENSVVUG00000013461	UBR5	100	88.614	Vulpes_vulpes
ENSGACG00000004642	ubr5	100	87.666	ENSXETG00000031995	UBR5	99	87.568	Xenopus_tropicalis
ENSGACG00000004642	ubr5	81	94.475	ENSXCOG00000017034	ubr5	99	92.042	Xiphophorus_couchianus
ENSGACG00000004642	ubr5	100	95.655	ENSXMAG00000002429	ubr5	100	95.518	Xiphophorus_maculatus