EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000004679 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 6747 bases
Position: chrgroupXVIII:1276292-1283038
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006180	SAP	PF02037.27	4.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006197	-	2457	-	ENSGACP00000006180	819 (aa)	-	G3NLG7

Gene Model

Click here to download ENSGACG00000004679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000004679	hnrnpub	53	36.735	ENSGACG00000017006	si:ch211-107m4.1	80	44.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004679	hnrnpub	72	77.083	ENSG00000153187	HNRNPU	99	64.333	Homo_sapiens
ENSGACG00000004679	hnrnpub	99	76.852	ENSAPOG00000017400	hnrnpub	100	74.397	Acanthochromis_polyacanthus
ENSGACG00000004679	hnrnpub	73	61.130	ENSAMEG00000009145	HNRNPU	71	62.109	Ailuropoda_melanoleuca
ENSGACG00000004679	hnrnpub	98	73.833	ENSACIG00000012138	hnrnpub	100	82.931	Amphilophus_citrinellus
ENSGACG00000004679	hnrnpub	99	76.443	ENSAOCG00000015843	hnrnpub	100	75.000	Amphiprion_ocellaris
ENSGACG00000004679	hnrnpub	99	76.443	ENSAPEG00000014679	hnrnpub	100	75.000	Amphiprion_percula
ENSGACG00000004679	hnrnpub	98	77.946	ENSATEG00000016178	hnrnpub	97	75.469	Anabas_testudineus
ENSGACG00000004679	hnrnpub	74	61.244	ENSACAG00000004511	HNRNPU	72	61.244	Anolis_carolinensis
ENSGACG00000004679	hnrnpub	99	53.398	ENSANAG00000033895	-	78	74.000	Aotus_nancymaae
ENSGACG00000004679	hnrnpub	99	76.236	ENSACLG00000008165	hnrnpub	100	75.513	Astatotilapia_calliptera
ENSGACG00000004679	hnrnpub	73	57.692	ENSBTAG00000007606	HNRNPU	74	60.539	Bos_taurus
ENSGACG00000004679	hnrnpub	72	77.083	ENSCJAG00000016914	HNRNPU	78	74.000	Callithrix_jacchus
ENSGACG00000004679	hnrnpub	73	57.692	ENSCAFG00020000918	HNRNPU	77	59.380	Canis_lupus_dingo
ENSGACG00000004679	hnrnpub	73	57.692	ENSCHIG00000004900	HNRNPU	77	59.225	Capra_hircus
ENSGACG00000004679	hnrnpub	73	61.794	ENSCPOG00000011887	HNRNPU	74	60.697	Cavia_porcellus
ENSGACG00000004679	hnrnpub	99	53.398	ENSCCAG00000037859	-	78	74.000	Cebus_capucinus
ENSGACG00000004679	hnrnpub	98	53.563	ENSCATG00000035273	HNRNPU	78	74.000	Cercocebus_atys
ENSGACG00000004679	hnrnpub	73	61.794	ENSCLAG00000007100	HNRNPU	74	60.697	Chinchilla_lanigera
ENSGACG00000004679	hnrnpub	99	53.438	ENSCSAG00000009219	HNRNPU	77	59.225	Chlorocebus_sabaeus
ENSGACG00000004679	hnrnpub	79	77.083	ENSCHOG00000001387	HNRNPU	77	74.000	Choloepus_hoffmanni
ENSGACG00000004679	hnrnpub	74	60.423	ENSCPBG00000009415	HNRNPU	71	60.948	Chrysemys_picta_bellii
ENSGACG00000004679	hnrnpub	99	52.934	ENSCANG00000022780	HNRNPU	76	61.246	Colobus_angolensis_palliatus
ENSGACG00000004679	hnrnpub	99	50.059	ENSCGRG00001020525	Hnrnpu	79	58.841	Cricetulus_griseus_chok1gshd
ENSGACG00000004679	hnrnpub	99	69.283	ENSCSEG00000010804	hnrnpub	91	88.000	Cynoglossus_semilaevis
ENSGACG00000004679	hnrnpub	94	69.467	ENSCVAG00000004280	hnrnpub	100	69.722	Cyprinodon_variegatus
ENSGACG00000004679	hnrnpub	79	87.500	ENSDARG00000015206	hnrnpua	88	87.500	Danio_rerio
ENSGACG00000004679	hnrnpub	83	64.384	ENSDARG00000004735	hnrnpub	88	89.130	Danio_rerio
ENSGACG00000004679	hnrnpub	79	77.551	ENSDNOG00000000215	HNRNPU	88	74.510	Dasypus_novemcinctus
ENSGACG00000004679	hnrnpub	73	61.628	ENSDORG00000015491	Hnrnpu	74	61.881	Dipodomys_ordii
ENSGACG00000004679	hnrnpub	89	61.194	ENSETEG00000014565	HNRNPU	79	74.000	Echinops_telfairi
ENSGACG00000004679	hnrnpub	74	61.175	ENSEASG00005003017	HNRNPU	77	59.568	Equus_asinus_asinus
ENSGACG00000004679	hnrnpub	74	61.011	ENSECAG00000007955	HNRNPU	77	59.414	Equus_caballus
ENSGACG00000004679	hnrnpub	99	66.002	ENSELUG00000010733	hnrnpub	84	69.160	Esox_lucius
ENSGACG00000004679	hnrnpub	72	77.083	ENSFCAG00000002156	HNRNPU	78	74.000	Felis_catus
ENSGACG00000004679	hnrnpub	83	61.066	ENSFDAG00000006026	HNRNPU	98	76.000	Fukomys_damarensis
ENSGACG00000004679	hnrnpub	99	70.862	ENSFHEG00000022639	hnrnpub	100	70.408	Fundulus_heteroclitus
ENSGACG00000004679	hnrnpub	99	75.574	ENSGMOG00000001755	hnrnpub	99	74.818	Gadus_morhua
ENSGACG00000004679	hnrnpub	73	61.692	ENSGALG00000010671	HNRNPU	70	60.813	Gallus_gallus
ENSGACG00000004679	hnrnpub	99	68.192	ENSGAFG00000009369	hnrnpub	83	74.966	Gambusia_affinis
ENSGACG00000004679	hnrnpub	72	77.083	ENSGGOG00000004061	HNRNPU	78	74.000	Gorilla_gorilla
ENSGACG00000004679	hnrnpub	99	75.350	ENSHBUG00000012290	hnrnpub	100	75.234	Haplochromis_burtoni
ENSGACG00000004679	hnrnpub	73	61.794	ENSHGLG00000010594	-	77	59.380	Heterocephalus_glaber_female
ENSGACG00000004679	hnrnpub	85	61.794	ENSHGLG00100015093	HNRNPU	97	76.000	Heterocephalus_glaber_male
ENSGACG00000004679	hnrnpub	99	66.135	ENSHCOG00000020091	hnrnpub	83	71.448	Hippocampus_comes
ENSGACG00000004679	hnrnpub	74	93.617	ENSIPUG00000007749	hnrnpu	94	91.667	Ictalurus_punctatus
ENSGACG00000004679	hnrnpub	73	61.628	ENSJJAG00000011371	Hnrnpu	71	62.046	Jaculus_jaculus
ENSGACG00000004679	hnrnpub	99	72.706	ENSKMAG00000004532	hnrnpub	100	72.738	Kryptolebias_marmoratus
ENSGACG00000004679	hnrnpub	83	78.095	ENSLBEG00000022520	hnrnpub	84	79.320	Labrus_bergylta
ENSGACG00000004679	hnrnpub	99	49.176	ENSLACG00000017463	HNRNPU	80	51.754	Latimeria_chalumnae
ENSGACG00000004679	hnrnpub	82	69.440	ENSLOCG00000016652	hnrnpua	80	71.014	Lepisosteus_oculatus
ENSGACG00000004679	hnrnpub	99	50.643	ENSLAFG00000021377	HNRNPU	78	59.225	Loxodonta_africana
ENSGACG00000004679	hnrnpub	75	59.601	ENSMFAG00000037308	HNRNPU	78	74.000	Macaca_fascicularis
ENSGACG00000004679	hnrnpub	99	53.438	ENSMMUG00000021098	HNRNPU	78	59.225	Macaca_mulatta
ENSGACG00000004679	hnrnpub	75	59.601	ENSMNEG00000043645	HNRNPU	78	74.000	Macaca_nemestrina
ENSGACG00000004679	hnrnpub	99	77.803	ENSMAMG00000007196	hnrnpub	100	76.389	Mastacembelus_armatus
ENSGACG00000004679	hnrnpub	99	76.357	ENSMZEG00005003185	hnrnpub	100	75.633	Maylandia_zebra
ENSGACG00000004679	hnrnpub	99	50.000	ENSMAUG00000008842	Hnrnpu	83	56.440	Mesocricetus_auratus
ENSGACG00000004679	hnrnpub	99	53.446	ENSMICG00000004616	HNRNPU	78	74.000	Microcebus_murinus
ENSGACG00000004679	hnrnpub	99	49.941	ENSMOCG00000015623	Hnrnpu	79	58.689	Microtus_ochrogaster
ENSGACG00000004679	hnrnpub	73	56.201	ENSMODG00000006515	HNRNPU	73	59.317	Monodelphis_domestica
ENSGACG00000004679	hnrnpub	97	80.149	ENSMALG00000018243	hnrnpub	96	79.777	Monopterus_albus
ENSGACG00000004679	hnrnpub	99	50.592	MGP_CAROLIEiJ_G0014962	Hnrnpu	83	56.894	Mus_caroli
ENSGACG00000004679	hnrnpub	73	57.005	ENSMUSG00000039630	Hnrnpu	83	56.894	Mus_musculus
ENSGACG00000004679	hnrnpub	73	60.762	MGP_PahariEiJ_G0028193	Hnrnpu	78	58.104	Mus_pahari
ENSGACG00000004679	hnrnpub	73	57.005	MGP_SPRETEiJ_G0015761	Hnrnpu	83	56.894	Mus_spretus
ENSGACG00000004679	hnrnpub	74	59.804	ENSMLUG00000000475	HNRNPU	74	60.848	Myotis_lucifugus
ENSGACG00000004679	hnrnpub	99	53.930	ENSNGAG00000019075	Hnrnpu	78	59.225	Nannospalax_galili
ENSGACG00000004679	hnrnpub	99	75.117	ENSNBRG00000017855	hnrnpub	100	74.883	Neolamprologus_brichardi
ENSGACG00000004679	hnrnpub	63	57.220	ENSMEUG00000000541	HNRNPU	69	58.893	Notamacropus_eugenii
ENSGACG00000004679	hnrnpub	99	72.664	ENSONIG00000001260	hnrnpub	88	78.641	Oreochromis_niloticus
ENSGACG00000004679	hnrnpub	71	61.864	ENSOCUG00000014469	HNRNPU	68	60.616	Oryctolagus_cuniculus
ENSGACG00000004679	hnrnpub	99	72.601	ENSORLG00000016114	hnrnpub	100	72.486	Oryzias_latipes
ENSGACG00000004679	hnrnpub	99	72.254	ENSORLG00020005363	hnrnpub	100	72.486	Oryzias_latipes_hni
ENSGACG00000004679	hnrnpub	99	72.254	ENSORLG00015001190	hnrnpub	100	69.108	Oryzias_latipes_hsok
ENSGACG00000004679	hnrnpub	99	71.132	ENSOMEG00000014951	hnrnpub	100	72.286	Oryzias_melastigma
ENSGACG00000004679	hnrnpub	99	50.703	ENSOGAG00000014024	HNRNPU	77	59.380	Otolemur_garnettii
ENSGACG00000004679	hnrnpub	79	77.083	ENSOARG00000004985	HNRNPU	87	74.000	Ovis_aries
ENSGACG00000004679	hnrnpub	72	77.083	ENSPPAG00000038652	HNRNPU	78	74.000	Pan_paniscus
ENSGACG00000004679	hnrnpub	72	77.083	ENSPPRG00000002662	HNRNPU	78	74.000	Panthera_pardus
ENSGACG00000004679	hnrnpub	72	77.083	ENSPTRG00000002182	HNRNPU	78	74.000	Pan_troglodytes
ENSGACG00000004679	hnrnpub	99	53.438	ENSPANG00000011643	HNRNPU	78	74.000	Papio_anubis
ENSGACG00000004679	hnrnpub	99	61.944	ENSPKIG00000006885	hnrnpua	79	72.283	Paramormyrops_kingsleyae
ENSGACG00000004679	hnrnpub	99	60.355	ENSPKIG00000022332	hnrnpub	82	67.511	Paramormyrops_kingsleyae
ENSGACG00000004679	hnrnpub	81	55.342	ENSPCIG00000008657	HNRNPU	77	70.370	Phascolarctos_cinereus
ENSGACG00000004679	hnrnpub	99	70.455	ENSPFOG00000002908	hnrnpub	100	70.890	Poecilia_formosa
ENSGACG00000004679	hnrnpub	99	70.114	ENSPLAG00000004160	hnrnpub	100	71.005	Poecilia_latipinna
ENSGACG00000004679	hnrnpub	99	50.467	ENSPCOG00000018655	-	78	74.000	Propithecus_coquereli
ENSGACG00000004679	hnrnpub	73	56.550	ENSPCOG00000003883	-	76	59.807	Propithecus_coquereli
ENSGACG00000004679	hnrnpub	73	62.126	ENSPVAG00000002581	HNRNPU	74	61.587	Pteropus_vampyrus
ENSGACG00000004679	hnrnpub	99	75.350	ENSPNYG00000021642	hnrnpub	100	75.117	Pundamilia_nyererei
ENSGACG00000004679	hnrnpub	99	60.759	ENSPNAG00000001055	hnrnpub	100	61.512	Pygocentrus_nattereri
ENSGACG00000004679	hnrnpub	78	54.505	ENSRNOG00000033790	Hnrnpu	78	58.931	Rattus_norvegicus
ENSGACG00000004679	hnrnpub	99	52.842	ENSRBIG00000031519	HNRNPU	87	55.673	Rhinopithecus_bieti
ENSGACG00000004679	hnrnpub	99	53.317	ENSRROG00000041642	HNRNPU	78	59.105	Rhinopithecus_roxellana
ENSGACG00000004679	hnrnpub	99	64.554	ENSSFOG00015001124	hnrnpub	82	68.511	Scleropages_formosus
ENSGACG00000004679	hnrnpub	99	62.033	ENSSFOG00015019004	hnrnpu	78	73.059	Scleropages_formosus
ENSGACG00000004679	hnrnpub	99	76.351	ENSSMAG00000003607	hnrnpub	100	74.887	Scophthalmus_maximus
ENSGACG00000004679	hnrnpub	99	75.709	ENSSDUG00000005912	hnrnpub	100	77.408	Seriola_dumerili
ENSGACG00000004679	hnrnpub	99	75.654	ENSSLDG00000004899	hnrnpub	100	77.126	Seriola_lalandi_dorsalis
ENSGACG00000004679	hnrnpub	73	62.376	ENSSPUG00000011393	HNRNPU	71	62.932	Sphenodon_punctatus
ENSGACG00000004679	hnrnpub	99	76.389	ENSSPAG00000011853	hnrnpub	100	75.810	Stegastes_partitus
ENSGACG00000004679	hnrnpub	73	61.462	ENSSSCG00000010877	HNRNPU	77	59.225	Sus_scrofa
ENSGACG00000004679	hnrnpub	99	71.429	ENSTRUG00000007759	hnrnpub	90	83.636	Takifugu_rubripes
ENSGACG00000004679	hnrnpub	99	68.281	ENSTNIG00000009725	hnrnpub	98	80.000	Tetraodon_nigroviridis
ENSGACG00000004679	hnrnpub	72	77.083	ENSUAMG00000021120	HNRNPU	78	74.000	Ursus_americanus
ENSGACG00000004679	hnrnpub	83	61.667	ENSUMAG00000012322	HNRNPU	95	69.388	Ursus_maritimus
ENSGACG00000004679	hnrnpub	72	77.083	ENSVPAG00000010520	HNRNPU	83	74.000	Vicugna_pacos
ENSGACG00000004679	hnrnpub	73	59.365	ENSVVUG00000026524	HNRNPU	77	59.380	Vulpes_vulpes
ENSGACG00000004679	hnrnpub	99	49.247	ENSXETG00000011386	hnrnpu	84	54.101	Xenopus_tropicalis
ENSGACG00000004679	hnrnpub	99	70.748	ENSXMAG00000010356	hnrnpub	100	71.347	Xiphophorus_maculatus