EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGACG00000004717 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Gasterosteus_aculeatus
Status
putative
Strand
Plus strand
Length
7304 bases
Position
chrgroupXXI:10089384-10096687
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGACP00000006224RRM_1PF00076.222.7e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGACT00000006241-1904-ENSGACP00000006224527 (aa)-G3NLL1
Gene Model
Click here to download ENSGACG00000004717's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004717's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGACG00000004717puf60b9861.079ENSGACG00000001484-10060.895
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGACG00000004717puf60b10072.523ENSG00000179950PUF6010073.805Homo_sapiens
ENSGACG00000004717puf60b9884.586ENSAPOG00000001713puf60b9984.586Acanthochromis_polyacanthus
ENSGACG00000004717puf60b9870.588ENSAMEG00000006406PUF609371.078Ailuropoda_melanoleuca
ENSGACG00000004717puf60b9769.455ENSACIG00000003263-9970.793Amphilophus_citrinellus
ENSGACG00000004717puf60b9784.600ENSACIG00000021705puf60b10084.600Amphilophus_citrinellus
ENSGACG00000004717puf60b9884.586ENSAOCG00000005395puf60b10084.600Amphiprion_ocellaris
ENSGACG00000004717puf60b9971.727ENSAOCG00000015558-9972.348Amphiprion_ocellaris
ENSGACG00000004717puf60b9763.178ENSAPEG00000001836-9965.000Amphiprion_percula
ENSGACG00000004717puf60b9879.191ENSAPEG00000011923puf60b9979.191Amphiprion_percula
ENSGACG00000004717puf60b9970.265ENSATEG00000006303-9970.644Anabas_testudineus
ENSGACG00000004717puf60b9885.742ENSATEG00000001730puf60b9985.742Anabas_testudineus
ENSGACG00000004717puf60b9873.245ENSAPLG00000010150PUF6010073.624Anas_platyrhynchos
ENSGACG00000004717puf60b9972.693ENSACAG00000001645PUF609872.897Anolis_carolinensis
ENSGACG00000004717puf60b10072.336ENSANAG00000018626PUF6010073.614Aotus_nancymaae
ENSGACG00000004717puf60b9784.600ENSACLG00000004462puf60b10084.600Astatotilapia_calliptera
ENSGACG00000004717puf60b9974.672ENSAMXG00000036570puf60a10072.426Astyanax_mexicanus
ENSGACG00000004717puf60b9768.501ENSAMXG00000041030puf60b10068.501Astyanax_mexicanus
ENSGACG00000004717puf60b10072.897ENSBTAG00000037493PUF6010073.557Bos_taurus
ENSGACG00000004717puf60b8246.400WBGene00004389rnp-68835.777Caenorhabditis_elegans
ENSGACG00000004717puf60b10072.523ENSCJAG00000021485PUF6010073.184Callithrix_jacchus
ENSGACG00000004717puf60b9872.296ENSCAFG00000001400PUF609372.968Canis_familiaris
ENSGACG00000004717puf60b10072.710ENSCAFG00020018754PUF6010073.371Canis_lupus_dingo
ENSGACG00000004717puf60b9872.865ENSCHIG00000001618PUF608773.535Capra_hircus
ENSGACG00000004717puf60b10072.897ENSTSYG00000011912PUF6010073.996Carlito_syrichta
ENSGACG00000004717puf60b9867.985ENSCPOG00000014613PUF609468.480Cavia_porcellus
ENSGACG00000004717puf60b10072.897ENSCCAG00000007744PUF6010073.371Cebus_capucinus
ENSGACG00000004717puf60b10072.523ENSCATG00000035405PUF6010073.184Cercocebus_atys
ENSGACG00000004717puf60b9872.865ENSCLAG00000009154PUF609373.535Chinchilla_lanigera
ENSGACG00000004717puf60b9773.129ENSCSAG00000008878PUF6010073.805Chlorocebus_sabaeus
ENSGACG00000004717puf60b9873.714ENSCPBG00000005595PUF609973.596Chrysemys_picta_bellii
ENSGACG00000004717puf60b9841.445ENSCING00000008436-9841.333Ciona_intestinalis
ENSGACG00000004717puf60b6247.041ENSCING00000002156-8747.041Ciona_intestinalis
ENSGACG00000004717puf60b7753.459ENSCSAVG00000004765-9740.117Ciona_savignyi
ENSGACG00000004717puf60b9548.197ENSCSAVG00000001385-8568.889Ciona_savignyi
ENSGACG00000004717puf60b7969.668ENSCANG00000041843PUF6010070.519Colobus_angolensis_palliatus
ENSGACG00000004717puf60b9873.055ENSCGRG00001017442Puf609373.724Cricetulus_griseus_chok1gshd
ENSGACG00000004717puf60b9873.055ENSCGRG00000003717Puf609373.724Cricetulus_griseus_crigri
ENSGACG00000004717puf60b9963.977ENSCSEG00000014845-9165.291Cynoglossus_semilaevis
ENSGACG00000004717puf60b9885.356ENSCSEG00000019887puf60b9385.356Cynoglossus_semilaevis
ENSGACG00000004717puf60b8968.803ENSCVAG00000001560-9868.803Cyprinodon_variegatus
ENSGACG00000004717puf60b9783.626ENSCVAG00000009386puf60b10083.626Cyprinodon_variegatus
ENSGACG00000004717puf60b9769.450ENSDARG00000001241puf60b9969.450Danio_rerio
ENSGACG00000004717puf60b9775.723ENSDARG00000032175puf60a9975.723Danio_rerio
ENSGACG00000004717puf60b9659.533ENSDNOG00000043278PUF609060.271Dasypus_novemcinctus
ENSGACG00000004717puf60b9873.055ENSDORG00000004585Puf609573.724Dipodomys_ordii
ENSGACG00000004717puf60b9750.000ENSEBUG00000014291puf60b8452.632Eptatretus_burgeri
ENSGACG00000004717puf60b9558.847ENSEBUG00000005470-9257.034Eptatretus_burgeri
ENSGACG00000004717puf60b10072.710ENSEASG00005009695PUF6010073.371Equus_asinus_asinus
ENSGACG00000004717puf60b9972.727ENSECAG00000024681PUF609773.396Equus_caballus
ENSGACG00000004717puf60b10075.651ENSELUG00000006507puf60b9975.184Esox_lucius
ENSGACG00000004717puf60b9877.011ENSELUG00000018443-9976.091Esox_lucius
ENSGACG00000004717puf60b10072.710ENSFCAG00000001045PUF6010073.996Felis_catus
ENSGACG00000004717puf60b9964.015ENSFALG00000001136PUF609964.773Ficedula_albicollis
ENSGACG00000004717puf60b9872.865ENSFDAG00000017177PUF609373.535Fukomys_damarensis
ENSGACG00000004717puf60b9370.325ENSFHEG00000021687PUF6010071.488Fundulus_heteroclitus
ENSGACG00000004717puf60b9884.393ENSFHEG00000020046puf60b10084.211Fundulus_heteroclitus
ENSGACG00000004717puf60b9882.420ENSGMOG00000006392puf60b10083.397Gadus_morhua
ENSGACG00000004717puf60b6471.137ENSGALG00000039901PUF609471.137Gallus_gallus
ENSGACG00000004717puf60b9769.126ENSGAFG00000004334-9969.126Gambusia_affinis
ENSGACG00000004717puf60b9884.393ENSGAFG00000021040puf60b10084.211Gambusia_affinis
ENSGACG00000004717puf60b9873.714ENSGAGG00000013289PUF609373.596Gopherus_agassizii
ENSGACG00000004717puf60b10072.523ENSGGOG00000004646PUF6010073.184Gorilla_gorilla
ENSGACG00000004717puf60b9971.048ENSHBUG00000009634-9971.048Haplochromis_burtoni
ENSGACG00000004717puf60b9884.778ENSHBUG00000015118puf60b10084.600Haplochromis_burtoni
ENSGACG00000004717puf60b9872.865ENSHGLG00000006111PUF609373.535Heterocephalus_glaber_female
ENSGACG00000004717puf60b9872.865ENSHGLG00100012362PUF609373.535Heterocephalus_glaber_male
ENSGACG00000004717puf60b9880.712ENSHCOG00000015541puf60b10081.648Hippocampus_comes
ENSGACG00000004717puf60b9655.882ENSHCOG00000000378-9955.179Hippocampus_comes
ENSGACG00000004717puf60b9773.704ENSIPUG00000002453puf60a9973.704Ictalurus_punctatus
ENSGACG00000004717puf60b9769.697ENSIPUG00000004660puf60b9969.697Ictalurus_punctatus
ENSGACG00000004717puf60b9872.865ENSSTOG00000025037PUF609473.535Ictidomys_tridecemlineatus
ENSGACG00000004717puf60b9873.055ENSJJAG00000001076Puf609373.724Jaculus_jaculus
ENSGACG00000004717puf60b9784.405ENSKMAG00000016745puf60b10084.405Kryptolebias_marmoratus
ENSGACG00000004717puf60b9765.835ENSKMAG00000010106-10066.475Kryptolebias_marmoratus
ENSGACG00000004717puf60b9992.208ENSLBEG00000012505puf60b10092.208Labrus_bergylta
ENSGACG00000004717puf60b6069.969ENSLACG00000005456PUF609669.969Latimeria_chalumnae
ENSGACG00000004717puf60b9976.762ENSLOCG00000010106puf60b9976.762Lepisosteus_oculatus
ENSGACG00000004717puf60b9871.917ENSLAFG00000022929PUF609472.590Loxodonta_africana
ENSGACG00000004717puf60b10072.523ENSMFAG00000043373PUF6010073.184Macaca_fascicularis
ENSGACG00000004717puf60b10072.523ENSMMUG00000013558PUF6010073.184Macaca_mulatta
ENSGACG00000004717puf60b10072.523ENSMNEG00000031099PUF6010073.184Macaca_nemestrina
ENSGACG00000004717puf60b9773.129ENSMLEG00000040009PUF6010073.805Mandrillus_leucophaeus
ENSGACG00000004717puf60b9971.483ENSMAMG00000019476-9971.673Mastacembelus_armatus
ENSGACG00000004717puf60b9883.430ENSMAMG00000010394puf60b10081.025Mastacembelus_armatus
ENSGACG00000004717puf60b9971.048ENSMZEG00005019425-9971.048Maylandia_zebra
ENSGACG00000004717puf60b9784.600ENSMZEG00005018515puf60b10084.600Maylandia_zebra
ENSGACG00000004717puf60b9873.245ENSMGAG00000013070PUF609873.624Meleagris_gallopavo
ENSGACG00000004717puf60b6871.585ENSMAUG00000014267-9071.585Mesocricetus_auratus
ENSGACG00000004717puf60b9356.944ENSMAUG00000018549-9557.685Mesocricetus_auratus
ENSGACG00000004717puf60b10072.710ENSMICG00000012226PUF6010073.371Microcebus_murinus
ENSGACG00000004717puf60b9873.055ENSMOCG00000018780Puf609373.724Microtus_ochrogaster
ENSGACG00000004717puf60b9785.575ENSMMOG00000004217puf60b10085.575Mola_mola
ENSGACG00000004717puf60b9862.004ENSMMOG00000018059-9870.352Mola_mola
ENSGACG00000004717puf60b9872.486ENSMODG00000009161PUF609473.157Monodelphis_domestica
ENSGACG00000004717puf60b9877.264ENSMALG00000006797puf60b9977.264Monopterus_albus
ENSGACG00000004717puf60b9970.095ENSMALG00000000200-9969.333Monopterus_albus
ENSGACG00000004717puf60b9873.435MGP_CAROLIEiJ_G0019910Puf609374.102Mus_caroli
ENSGACG00000004717puf60b9873.435ENSMUSG00000002524Puf609374.102Mus_musculus
ENSGACG00000004717puf60b9873.435MGP_PahariEiJ_G0019920Puf609374.102Mus_pahari
ENSGACG00000004717puf60b9873.435MGP_SPRETEiJ_G0020812Puf609374.102Mus_spretus
ENSGACG00000004717puf60b9872.486ENSMPUG00000008137PUF609273.157Mustela_putorius_furo
ENSGACG00000004717puf60b10067.290ENSMLUG00000013032-10067.970Myotis_lucifugus
ENSGACG00000004717puf60b9872.296ENSMLUG00000000238-9372.968Myotis_lucifugus
ENSGACG00000004717puf60b9873.055ENSNGAG00000000712Puf6010074.379Nannospalax_galili
ENSGACG00000004717puf60b9971.238ENSNBRG00000017223-9971.238Neolamprologus_brichardi
ENSGACG00000004717puf60b8378.747ENSNBRG00000013047puf60b9780.815Neolamprologus_brichardi
ENSGACG00000004717puf60b9972.180ENSNLEG00000002156PUF609972.846Nomascus_leucogenys
ENSGACG00000004717puf60b7077.419ENSOPRG00000002147PUF607277.419Ochotona_princeps
ENSGACG00000004717puf60b7084.375ENSODEG00000014024-9084.375Octodon_degus
ENSGACG00000004717puf60b9555.686ENSODEG00000015513-9755.470Octodon_degus
ENSGACG00000004717puf60b9884.778ENSONIG00000006247puf60b9884.778Oreochromis_niloticus
ENSGACG00000004717puf60b10070.644ENSONIG00000014030-10070.644Oreochromis_niloticus
ENSGACG00000004717puf60b9658.285ENSOANG00000006962PUF609958.743Ornithorhynchus_anatinus
ENSGACG00000004717puf60b9769.615ENSORLG00000028655-9970.250Oryzias_latipes
ENSGACG00000004717puf60b9883.815ENSORLG00000012279puf60b10083.821Oryzias_latipes
ENSGACG00000004717puf60b9883.815ENSORLG00020007333puf6010083.821Oryzias_latipes_hni
ENSGACG00000004717puf60b9969.772ENSORLG00020018144-9970.265Oryzias_latipes_hni
ENSGACG00000004717puf60b9882.917ENSORLG00015007718puf60b10083.495Oryzias_latipes_hsok
ENSGACG00000004717puf60b9969.582ENSORLG00015016833-9970.076Oryzias_latipes_hsok
ENSGACG00000004717puf60b9881.698ENSOMEG00000001643puf60b9981.698Oryzias_melastigma
ENSGACG00000004717puf60b9970.095ENSOMEG00000022185-9970.778Oryzias_melastigma
ENSGACG00000004717puf60b9872.865ENSOGAG00000006259PUF609373.535Otolemur_garnettii
ENSGACG00000004717puf60b9871.374ENSOARG00000016235PUF609872.053Ovis_aries
ENSGACG00000004717puf60b10072.523ENSPPAG00000029933PUF6010073.184Pan_paniscus
ENSGACG00000004717puf60b10072.710ENSPPRG00000003257PUF6010073.996Panthera_pardus
ENSGACG00000004717puf60b9870.398ENSPTIG00000009795PUF609971.078Panthera_tigris_altaica
ENSGACG00000004717puf60b9972.180ENSPTRG00000043963-9972.846Pan_troglodytes
ENSGACG00000004717puf60b10072.523ENSPTRG00000020670PUF6010073.184Pan_troglodytes
ENSGACG00000004717puf60b10072.523ENSPANG00000021936PUF6010073.184Papio_anubis
ENSGACG00000004717puf60b9878.420ENSPKIG00000012204puf60b10078.752Paramormyrops_kingsleyae
ENSGACG00000004717puf60b9877.629ENSPKIG00000004295puf60a9977.563Paramormyrops_kingsleyae
ENSGACG00000004717puf60b9972.453ENSPSIG00000004679PUF609973.120Pelodiscus_sinensis
ENSGACG00000004717puf60b9881.853ENSPMGG00000013444puf60b10081.853Periophthalmus_magnuspinnatus
ENSGACG00000004717puf60b9873.055ENSPEMG00000008820Puf609373.724Peromyscus_maniculatus_bairdii
ENSGACG00000004717puf60b9972.727ENSPCIG00000020270PUF609973.396Phascolarctos_cinereus
ENSGACG00000004717puf60b9969.886ENSPFOG00000011118-9969.754Poecilia_formosa
ENSGACG00000004717puf60b9884.393ENSPFOG00000019217puf60b9981.310Poecilia_formosa
ENSGACG00000004717puf60b9784.211ENSPLAG00000010754puf60b10084.211Poecilia_latipinna
ENSGACG00000004717puf60b9969.886ENSPLAG00000017025-9269.754Poecilia_latipinna
ENSGACG00000004717puf60b9884.393ENSPMEG00000000838puf60b10084.211Poecilia_mexicana
ENSGACG00000004717puf60b9969.697ENSPMEG00000009767-9269.943Poecilia_mexicana
ENSGACG00000004717puf60b9881.614ENSPREG00000005440puf60b9982.176Poecilia_reticulata
ENSGACG00000004717puf60b7968.009ENSPPYG00000018951-9568.868Pongo_abelii
ENSGACG00000004717puf60b7969.668ENSPCAG00000014837PUF6010070.519Procavia_capensis
ENSGACG00000004717puf60b10072.523ENSPCOG00000027981PUF6010073.184Propithecus_coquereli
ENSGACG00000004717puf60b9577.068ENSPVAG00000016167PUF608178.358Pteropus_vampyrus
ENSGACG00000004717puf60b9971.048ENSPNYG00000004273-9971.048Pundamilia_nyererei
ENSGACG00000004717puf60b9784.600ENSPNYG00000002556puf60b10084.600Pundamilia_nyererei
ENSGACG00000004717puf60b9972.710ENSPNAG00000019909puf60a10073.333Pygocentrus_nattereri
ENSGACG00000004717puf60b9867.052ENSPNAG00000019415puf60b9067.052Pygocentrus_nattereri
ENSGACG00000004717puf60b9873.435ENSRNOG00000009960Puf609374.102Rattus_norvegicus
ENSGACG00000004717puf60b10072.523ENSRBIG00000035274PUF6010073.184Rhinopithecus_bieti
ENSGACG00000004717puf60b10072.523ENSRROG00000029360PUF6010073.184Rhinopithecus_roxellana
ENSGACG00000004717puf60b9970.865ENSSBOG00000027089PUF609971.536Saimiri_boliviensis_boliviensis
ENSGACG00000004717puf60b8970.947ENSSHAG00000006668PUF609071.698Sarcophilus_harrisii
ENSGACG00000004717puf60b9771.098ENSSFOG00015019619puf60b9972.967Scleropages_formosus
ENSGACG00000004717puf60b9973.224ENSSFOG00015019371puf60a9878.004Scleropages_formosus
ENSGACG00000004717puf60b7297.980ENSSMAG00000016381puf60b7397.980Scophthalmus_maximus
ENSGACG00000004717puf60b9983.616ENSSDUG00000009935puf60b10083.616Seriola_dumerili
ENSGACG00000004717puf60b9671.484ENSSDUG00000007048-9772.070Seriola_dumerili
ENSGACG00000004717puf60b9983.650ENSSLDG00000024011puf60b10083.112Seriola_lalandi_dorsalis
ENSGACG00000004717puf60b9769.808ENSSLDG00000007366-9970.420Seriola_lalandi_dorsalis
ENSGACG00000004717puf60b6364.412ENSSPUG00000013518PUF609264.412Sphenodon_punctatus
ENSGACG00000004717puf60b9771.705ENSSPAG00000020285-10072.394Stegastes_partitus
ENSGACG00000004717puf60b9882.176ENSSPAG00000012144puf60b10082.732Stegastes_partitus
ENSGACG00000004717puf60b9872.676ENSSSCG00000038800PUF6010070.577Sus_scrofa
ENSGACG00000004717puf60b9870.833ENSTGUG00000012797-10070.833Taeniopygia_guttata
ENSGACG00000004717puf60b9767.510ENSTRUG00000008843-10067.510Takifugu_rubripes
ENSGACG00000004717puf60b9984.261ENSTRUG00000005420puf60b10082.163Takifugu_rubripes
ENSGACG00000004717puf60b9884.200ENSTNIG00000013675puf60b9984.200Tetraodon_nigroviridis
ENSGACG00000004717puf60b9868.401ENSTNIG00000003069-9968.401Tetraodon_nigroviridis
ENSGACG00000004717puf60b6064.955ENSTBEG00000001899-9467.169Tupaia_belangeri
ENSGACG00000004717puf60b9771.977ENSTTRG00000017088PUF6010072.849Tursiops_truncatus
ENSGACG00000004717puf60b10072.710ENSUAMG00000024917PUF6010073.371Ursus_americanus
ENSGACG00000004717puf60b9867.742ENSUMAG00000000272PUF609368.242Ursus_maritimus
ENSGACG00000004717puf60b9872.676ENSVVUG00000022527PUF6010073.996Vulpes_vulpes
ENSGACG00000004717puf60b10070.093ENSXETG00000012469puf6010071.136Xenopus_tropicalis
ENSGACG00000004717puf60b9781.092ENSXCOG00000012355puf60b10081.092Xiphophorus_couchianus
ENSGACG00000004717puf60b9867.754ENSXMAG00000010507-9967.754Xiphophorus_maculatus
ENSGACG00000004717puf60b9884.393ENSXMAG00000001862puf60b10084.211Xiphophorus_maculatus

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