EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000004803 (Gene tree)
Gene ID: -
Gene Symbol: sf3b6
Alias: sf3b14|zgc:86708
Full Name: splicing factor 3b%2C subunit 6
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 2412 bases
Position: chrgroupXVIII:1455598-1458009
Accession: ZDB-GENE-040625-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006360	RRM_1	PF00076.22	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006377	-	869	-	ENSGACP00000006360	125 (aa)	-	G3NLZ7

Gene Model

Click here to download ENSGACG00000004803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000004803	sf3b6	61	32.895	ENSGACG00000001473	-	60	32.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004803	sf3b6	100	97.600	ENSG00000115128	SF3B6	100	97.600	Homo_sapiens
ENSGACG00000004803	sf3b6	100	99.200	ENSAPOG00000023788	sf3b6	100	99.200	Acanthochromis_polyacanthus
ENSGACG00000004803	sf3b6	100	97.600	ENSAMEG00000002786	SF3B6	100	97.600	Ailuropoda_melanoleuca
ENSGACG00000004803	sf3b6	100	99.200	ENSACIG00000012608	sf3b6	100	99.200	Amphilophus_citrinellus
ENSGACG00000004803	sf3b6	100	99.200	ENSAOCG00000013394	sf3b6	100	99.200	Amphiprion_ocellaris
ENSGACG00000004803	sf3b6	100	99.200	ENSAPEG00000015311	sf3b6	100	99.200	Amphiprion_percula
ENSGACG00000004803	sf3b6	100	99.200	ENSATEG00000016569	sf3b6	100	99.200	Anabas_testudineus
ENSGACG00000004803	sf3b6	100	97.600	ENSACAG00000011677	SF3B6	100	97.600	Anolis_carolinensis
ENSGACG00000004803	sf3b6	100	97.600	ENSANAG00000027284	SF3B6	95	97.600	Aotus_nancymaae
ENSGACG00000004803	sf3b6	100	99.200	ENSACLG00000007793	sf3b6	100	99.200	Astatotilapia_calliptera
ENSGACG00000004803	sf3b6	100	97.600	ENSAMXG00000034888	sf3b6	100	97.600	Astyanax_mexicanus
ENSGACG00000004803	sf3b6	100	96.000	ENSBTAG00000049128	-	100	96.000	Bos_taurus
ENSGACG00000004803	sf3b6	100	97.600	ENSBTAG00000003407	SF3B6	100	97.600	Bos_taurus
ENSGACG00000004803	sf3b6	100	65.600	WBGene00016808	C50D2.5	91	65.600	Caenorhabditis_elegans
ENSGACG00000004803	sf3b6	100	97.600	ENSCJAG00000007716	SF3B6	100	97.600	Callithrix_jacchus
ENSGACG00000004803	sf3b6	100	97.600	ENSCAFG00000003957	SF3B6	100	97.600	Canis_familiaris
ENSGACG00000004803	sf3b6	100	97.600	ENSCAFG00020025576	SF3B6	100	97.600	Canis_lupus_dingo
ENSGACG00000004803	sf3b6	100	97.600	ENSCHIG00000009902	SF3B6	100	97.600	Capra_hircus
ENSGACG00000004803	sf3b6	100	97.600	ENSTSYG00000013978	SF3B6	100	97.600	Carlito_syrichta
ENSGACG00000004803	sf3b6	97	94.215	ENSCAPG00000016302	SF3B6	99	94.215	Cavia_aperea
ENSGACG00000004803	sf3b6	100	97.600	ENSCPOG00000008016	SF3B6	100	97.600	Cavia_porcellus
ENSGACG00000004803	sf3b6	99	91.935	ENSCCAG00000018894	-	96	91.935	Cebus_capucinus
ENSGACG00000004803	sf3b6	100	97.600	ENSCCAG00000036653	SF3B6	100	97.600	Cebus_capucinus
ENSGACG00000004803	sf3b6	100	97.600	ENSCATG00000030936	SF3B6	100	97.600	Cercocebus_atys
ENSGACG00000004803	sf3b6	100	97.600	ENSCLAG00000014512	SF3B6	100	97.600	Chinchilla_lanigera
ENSGACG00000004803	sf3b6	100	97.600	ENSCSAG00000008390	SF3B6	100	97.600	Chlorocebus_sabaeus
ENSGACG00000004803	sf3b6	99	71.774	ENSCHOG00000013886	-	99	71.774	Choloepus_hoffmanni
ENSGACG00000004803	sf3b6	100	97.600	ENSCHOG00000000689	SF3B6	100	97.600	Choloepus_hoffmanni
ENSGACG00000004803	sf3b6	100	97.600	ENSCPBG00000020042	SF3B6	100	97.600	Chrysemys_picta_bellii
ENSGACG00000004803	sf3b6	98	80.488	ENSCING00000012689	-	97	80.488	Ciona_intestinalis
ENSGACG00000004803	sf3b6	100	97.600	ENSCANG00000030559	SF3B6	100	97.600	Colobus_angolensis_palliatus
ENSGACG00000004803	sf3b6	100	97.600	ENSCGRG00001014595	Sf3b6	100	97.600	Cricetulus_griseus_chok1gshd
ENSGACG00000004803	sf3b6	100	97.600	ENSCGRG00000005272	Sf3b6	100	97.600	Cricetulus_griseus_crigri
ENSGACG00000004803	sf3b6	100	100.000	ENSCSEG00000019017	sf3b6	100	100.000	Cynoglossus_semilaevis
ENSGACG00000004803	sf3b6	100	98.400	ENSCVAG00000005055	sf3b6	100	98.400	Cyprinodon_variegatus
ENSGACG00000004803	sf3b6	100	97.600	ENSDARG00000009753	sf3b6	100	97.600	Danio_rerio
ENSGACG00000004803	sf3b6	100	97.600	ENSDNOG00000007148	SF3B6	100	97.600	Dasypus_novemcinctus
ENSGACG00000004803	sf3b6	100	97.600	ENSDORG00000009772	Sf3b6	100	97.600	Dipodomys_ordii
ENSGACG00000004803	sf3b6	99	80.159	ENSDORG00000029761	-	98	80.159	Dipodomys_ordii
ENSGACG00000004803	sf3b6	99	80.159	ENSDORG00000027390	-	98	80.159	Dipodomys_ordii
ENSGACG00000004803	sf3b6	92	76.522	FBgn0035692	Sf3b6	95	76.522	Drosophila_melanogaster
ENSGACG00000004803	sf3b6	92	91.304	ENSEBUG00000004424	sf3b6	91	91.304	Eptatretus_burgeri
ENSGACG00000004803	sf3b6	100	86.400	ENSEASG00005008061	-	100	86.400	Equus_asinus_asinus
ENSGACG00000004803	sf3b6	100	97.600	ENSEASG00005009993	SF3B6	100	97.600	Equus_asinus_asinus
ENSGACG00000004803	sf3b6	79	83.838	ENSECAG00000027755	-	85	83.838	Equus_caballus
ENSGACG00000004803	sf3b6	81	93.069	ENSECAG00000015618	SF3B6	93	93.069	Equus_caballus
ENSGACG00000004803	sf3b6	100	99.200	ENSELUG00000010379	sf3b6	100	99.200	Esox_lucius
ENSGACG00000004803	sf3b6	100	97.600	ENSFCAG00000031365	SF3B6	100	97.600	Felis_catus
ENSGACG00000004803	sf3b6	100	97.600	ENSFALG00000001651	SF3B6	100	97.600	Ficedula_albicollis
ENSGACG00000004803	sf3b6	100	97.600	ENSFDAG00000007864	SF3B6	100	97.600	Fukomys_damarensis
ENSGACG00000004803	sf3b6	100	98.400	ENSFHEG00000000685	sf3b6	100	98.400	Fundulus_heteroclitus
ENSGACG00000004803	sf3b6	100	98.400	ENSGMOG00000005123	sf3b6	100	98.400	Gadus_morhua
ENSGACG00000004803	sf3b6	73	97.802	ENSGALG00000016501	SF3B6	100	97.802	Gallus_gallus
ENSGACG00000004803	sf3b6	100	99.200	ENSGAFG00000009334	sf3b6	100	99.200	Gambusia_affinis
ENSGACG00000004803	sf3b6	100	97.600	ENSGAGG00000012240	SF3B6	100	97.600	Gopherus_agassizii
ENSGACG00000004803	sf3b6	100	97.600	ENSGGOG00000040806	SF3B6	100	97.600	Gorilla_gorilla
ENSGACG00000004803	sf3b6	100	99.200	ENSHBUG00000012556	sf3b6	100	99.200	Haplochromis_burtoni
ENSGACG00000004803	sf3b6	100	97.600	ENSHGLG00000014895	SF3B14	100	97.600	Heterocephalus_glaber_female
ENSGACG00000004803	sf3b6	100	97.600	ENSHGLG00100008639	SF3B14	100	97.600	Heterocephalus_glaber_male
ENSGACG00000004803	sf3b6	100	98.400	ENSHCOG00000019962	sf3b6	100	98.400	Hippocampus_comes
ENSGACG00000004803	sf3b6	100	97.600	ENSIPUG00000023800	sf3b6	100	97.600	Ictalurus_punctatus
ENSGACG00000004803	sf3b6	100	97.600	ENSJJAG00000021819	Sf3b6	100	97.600	Jaculus_jaculus
ENSGACG00000004803	sf3b6	100	99.200	ENSKMAG00000004000	sf3b6	100	99.200	Kryptolebias_marmoratus
ENSGACG00000004803	sf3b6	100	99.200	ENSLBEG00000022937	sf3b6	100	99.200	Labrus_bergylta
ENSGACG00000004803	sf3b6	100	97.600	ENSLACG00000014326	SF3B6	100	97.600	Latimeria_chalumnae
ENSGACG00000004803	sf3b6	100	97.600	ENSLOCG00000016481	sf3b6	100	97.600	Lepisosteus_oculatus
ENSGACG00000004803	sf3b6	100	97.600	ENSLAFG00000029423	SF3B6	100	97.600	Loxodonta_africana
ENSGACG00000004803	sf3b6	100	97.600	ENSMFAG00000038178	SF3B6	100	97.600	Macaca_fascicularis
ENSGACG00000004803	sf3b6	100	97.600	ENSMMUG00000001282	SF3B6	100	97.600	Macaca_mulatta
ENSGACG00000004803	sf3b6	100	97.600	ENSMNEG00000029050	SF3B6	100	97.600	Macaca_nemestrina
ENSGACG00000004803	sf3b6	100	97.600	ENSMLEG00000019896	SF3B6	100	97.600	Mandrillus_leucophaeus
ENSGACG00000004803	sf3b6	78	97.938	ENSMAMG00000007713	sf3b6	88	97.938	Mastacembelus_armatus
ENSGACG00000004803	sf3b6	100	99.200	ENSMZEG00005003557	sf3b6	100	99.200	Maylandia_zebra
ENSGACG00000004803	sf3b6	100	97.600	ENSMGAG00000014057	SF3B6	100	97.600	Meleagris_gallopavo
ENSGACG00000004803	sf3b6	100	97.600	ENSMAUG00000000586	-	100	97.600	Mesocricetus_auratus
ENSGACG00000004803	sf3b6	100	97.600	ENSMICG00000032874	SF3B6	100	97.600	Microcebus_murinus
ENSGACG00000004803	sf3b6	100	97.600	ENSMOCG00000014338	Sf3b6	100	97.600	Microtus_ochrogaster
ENSGACG00000004803	sf3b6	100	98.400	ENSMMOG00000015653	sf3b6	100	98.400	Mola_mola
ENSGACG00000004803	sf3b6	100	90.400	ENSMODG00000002144	SF3B6	100	90.400	Monodelphis_domestica
ENSGACG00000004803	sf3b6	100	98.400	ENSMALG00000019642	sf3b6	67	98.400	Monopterus_albus
ENSGACG00000004803	sf3b6	100	97.600	MGP_CAROLIEiJ_G0017590	Sf3b6	100	97.600	Mus_caroli
ENSGACG00000004803	sf3b6	100	97.600	ENSMUSG00000037361	Sf3b6	100	97.600	Mus_musculus
ENSGACG00000004803	sf3b6	100	97.600	MGP_PahariEiJ_G0029348	Sf3b6	100	97.600	Mus_pahari
ENSGACG00000004803	sf3b6	100	97.600	MGP_SPRETEiJ_G0018434	Sf3b6	100	97.600	Mus_spretus
ENSGACG00000004803	sf3b6	100	97.600	ENSMPUG00000013957	SF3B6	100	97.600	Mustela_putorius_furo
ENSGACG00000004803	sf3b6	100	96.000	ENSMLUG00000002473	SF3B6	100	96.000	Myotis_lucifugus
ENSGACG00000004803	sf3b6	100	97.600	ENSNGAG00000020256	Sf3b6	100	97.600	Nannospalax_galili
ENSGACG00000004803	sf3b6	100	99.200	ENSNBRG00000018244	sf3b6	100	99.200	Neolamprologus_brichardi
ENSGACG00000004803	sf3b6	100	97.600	ENSNLEG00000000815	-	100	97.600	Nomascus_leucogenys
ENSGACG00000004803	sf3b6	87	97.248	ENSODEG00000009547	SF3B6	92	97.248	Octodon_degus
ENSGACG00000004803	sf3b6	100	99.200	ENSONIG00000001219	sf3b6	100	99.200	Oreochromis_niloticus
ENSGACG00000004803	sf3b6	100	97.600	ENSOANG00000007627	SF3B6	100	97.600	Ornithorhynchus_anatinus
ENSGACG00000004803	sf3b6	100	97.600	ENSOCUG00000022008	SF3B6	100	97.600	Oryctolagus_cuniculus
ENSGACG00000004803	sf3b6	100	99.200	ENSORLG00000015955	sf3b6	100	99.200	Oryzias_latipes
ENSGACG00000004803	sf3b6	100	99.200	ENSORLG00020005875	sf3b6	100	99.200	Oryzias_latipes_hni
ENSGACG00000004803	sf3b6	100	99.200	ENSORLG00015001347	sf3b6	100	99.200	Oryzias_latipes_hsok
ENSGACG00000004803	sf3b6	100	97.600	ENSOMEG00000014506	sf3b6	100	97.600	Oryzias_melastigma
ENSGACG00000004803	sf3b6	100	97.600	ENSOGAG00000004468	SF3B6	100	97.600	Otolemur_garnettii
ENSGACG00000004803	sf3b6	100	97.600	ENSOARG00000017819	SF3B6	100	97.600	Ovis_aries
ENSGACG00000004803	sf3b6	100	97.600	ENSPPAG00000027816	SF3B6	100	97.600	Pan_paniscus
ENSGACG00000004803	sf3b6	100	97.600	ENSPPRG00000023257	SF3B6	100	97.600	Panthera_pardus
ENSGACG00000004803	sf3b6	100	97.600	ENSPTIG00000013322	SF3B6	100	97.600	Panthera_tigris_altaica
ENSGACG00000004803	sf3b6	100	97.600	ENSPTRG00000011709	SF3B6	100	97.600	Pan_troglodytes
ENSGACG00000004803	sf3b6	100	97.600	ENSPANG00000021963	SF3B6	100	97.600	Papio_anubis
ENSGACG00000004803	sf3b6	100	97.600	ENSPKIG00000012311	sf3b6	100	97.600	Paramormyrops_kingsleyae
ENSGACG00000004803	sf3b6	92	97.391	ENSPSIG00000017115	SF3B6	100	97.391	Pelodiscus_sinensis
ENSGACG00000004803	sf3b6	78	95.876	ENSPMGG00000014621	sf3b6	81	95.876	Periophthalmus_magnuspinnatus
ENSGACG00000004803	sf3b6	100	97.600	ENSPEMG00000010308	Sf3b6	100	97.600	Peromyscus_maniculatus_bairdii
ENSGACG00000004803	sf3b6	94	88.983	ENSPMAG00000006008	sf3b6	94	88.983	Petromyzon_marinus
ENSGACG00000004803	sf3b6	100	97.600	ENSPCIG00000022128	-	100	97.600	Phascolarctos_cinereus
ENSGACG00000004803	sf3b6	99	75.806	ENSPCIG00000015858	-	99	75.806	Phascolarctos_cinereus
ENSGACG00000004803	sf3b6	100	99.200	ENSPFOG00000012494	sf3b6	100	99.200	Poecilia_formosa
ENSGACG00000004803	sf3b6	100	99.200	ENSPLAG00000020460	sf3b6	100	99.200	Poecilia_latipinna
ENSGACG00000004803	sf3b6	100	99.200	ENSPMEG00000004426	sf3b6	100	99.200	Poecilia_mexicana
ENSGACG00000004803	sf3b6	100	97.600	ENSPPYG00000012603	SF3B6	100	97.600	Pongo_abelii
ENSGACG00000004803	sf3b6	100	97.600	ENSPVAG00000011346	SF3B6	100	97.600	Pteropus_vampyrus
ENSGACG00000004803	sf3b6	100	99.200	ENSPNYG00000021832	sf3b6	100	99.200	Pundamilia_nyererei
ENSGACG00000004803	sf3b6	100	97.600	ENSPNAG00000008845	sf3b6	100	97.600	Pygocentrus_nattereri
ENSGACG00000004803	sf3b6	100	82.400	ENSRNOG00000046172	Sf3b6	100	82.400	Rattus_norvegicus
ENSGACG00000004803	sf3b6	100	97.600	ENSRBIG00000039598	SF3B6	100	97.600	Rhinopithecus_bieti
ENSGACG00000004803	sf3b6	100	97.600	ENSRROG00000011368	SF3B6	100	97.600	Rhinopithecus_roxellana
ENSGACG00000004803	sf3b6	100	97.600	ENSSBOG00000002914	SF3B6	100	97.600	Saimiri_boliviensis_boliviensis
ENSGACG00000004803	sf3b6	100	97.600	ENSSFOG00015014370	sf3b6	100	97.600	Scleropages_formosus
ENSGACG00000004803	sf3b6	100	99.200	ENSSMAG00000004566	sf3b6	100	99.200	Scophthalmus_maximus
ENSGACG00000004803	sf3b6	100	99.200	ENSSDUG00000006538	sf3b6	100	99.200	Seriola_dumerili
ENSGACG00000004803	sf3b6	100	99.200	ENSSLDG00000004494	sf3b6	100	99.200	Seriola_lalandi_dorsalis
ENSGACG00000004803	sf3b6	100	97.600	ENSSARG00000011902	-	100	97.600	Sorex_araneus
ENSGACG00000004803	sf3b6	100	97.600	ENSSPUG00000014919	SF3B6	100	97.600	Sphenodon_punctatus
ENSGACG00000004803	sf3b6	100	99.200	ENSSPAG00000013201	sf3b6	100	99.200	Stegastes_partitus
ENSGACG00000004803	sf3b6	100	97.600	ENSSSCG00000008587	SF3B6	100	97.600	Sus_scrofa
ENSGACG00000004803	sf3b6	100	97.600	ENSTGUG00000013191	SF3B6	100	97.600	Taeniopygia_guttata
ENSGACG00000004803	sf3b6	100	99.200	ENSTRUG00000025286	sf3b6	100	99.200	Takifugu_rubripes
ENSGACG00000004803	sf3b6	100	99.200	ENSTNIG00000009719	sf3b6	100	99.200	Tetraodon_nigroviridis
ENSGACG00000004803	sf3b6	92	97.391	ENSTBEG00000012532	SF3B6	100	97.391	Tupaia_belangeri
ENSGACG00000004803	sf3b6	92	97.391	ENSTTRG00000013430	SF3B6	100	97.391	Tursiops_truncatus
ENSGACG00000004803	sf3b6	100	97.600	ENSUAMG00000025329	SF3B6	100	97.600	Ursus_americanus
ENSGACG00000004803	sf3b6	100	79.365	ENSUAMG00000000978	-	100	79.365	Ursus_americanus
ENSGACG00000004803	sf3b6	100	97.600	ENSUMAG00000022835	SF3B6	100	97.600	Ursus_maritimus
ENSGACG00000004803	sf3b6	92	97.391	ENSVPAG00000005546	SF3B6	100	97.391	Vicugna_pacos
ENSGACG00000004803	sf3b6	100	97.600	ENSVVUG00000010874	SF3B6	100	97.600	Vulpes_vulpes
ENSGACG00000004803	sf3b6	100	96.800	ENSXETG00000018204	sf3b6	100	96.800	Xenopus_tropicalis
ENSGACG00000004803	sf3b6	86	86.726	ENSXCOG00000008477	sf3b6	88	86.726	Xiphophorus_couchianus
ENSGACG00000004803	sf3b6	100	99.200	ENSXMAG00000010747	sf3b6	100	99.200	Xiphophorus_maculatus