EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004868 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3993 bases
Position: chrgroupV:5843061-5847053
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006455	SAP	PF02037.27	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006472	-	1917	-	ENSGACP00000006455	618 (aa)	-	G3NM92

Gene Model

Click here to download ENSGACG00000004868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004868's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004868	xrcc6	99	54.098	ENSG00000196419	XRCC6	99	54.098	Homo_sapiens
ENSGACG00000004868	xrcc6	99	85.668	ENSAPOG00000012704	xrcc6	100	85.668	Acanthochromis_polyacanthus
ENSGACG00000004868	xrcc6	99	83.713	ENSACIG00000021277	xrcc6	99	85.016	Amphilophus_citrinellus
ENSGACG00000004868	xrcc6	99	85.179	ENSAOCG00000021344	xrcc6	99	86.319	Amphiprion_ocellaris
ENSGACG00000004868	xrcc6	99	85.179	ENSAPEG00000020712	xrcc6	99	86.319	Amphiprion_percula
ENSGACG00000004868	xrcc6	99	85.808	ENSATEG00000007119	xrcc6	99	85.808	Anabas_testudineus
ENSGACG00000004868	xrcc6	89	59.783	ENSAPLG00000004469	XRCC6	99	59.783	Anas_platyrhynchos
ENSGACG00000004868	xrcc6	99	49.016	ENSANAG00000035230	-	99	49.016	Aotus_nancymaae
ENSGACG00000004868	xrcc6	99	47.377	ENSANAG00000020017	-	99	47.213	Aotus_nancymaae
ENSGACG00000004868	xrcc6	99	46.809	ENSANAG00000023445	-	99	46.809	Aotus_nancymaae
ENSGACG00000004868	xrcc6	99	54.262	ENSANAG00000018684	XRCC6	98	55.413	Aotus_nancymaae
ENSGACG00000004868	xrcc6	99	82.573	ENSACLG00000018608	xrcc6	99	83.713	Astatotilapia_calliptera
ENSGACG00000004868	xrcc6	99	76.346	ENSAMXG00000007545	xrcc6	99	76.346	Astyanax_mexicanus
ENSGACG00000004868	xrcc6	99	54.098	ENSCJAG00000045512	XRCC6	99	54.098	Callithrix_jacchus
ENSGACG00000004868	xrcc6	99	53.734	ENSTSYG00000011348	XRCC6	98	55.154	Carlito_syrichta
ENSGACG00000004868	xrcc6	99	43.922	ENSCCAG00000035711	-	99	44.046	Cebus_capucinus
ENSGACG00000004868	xrcc6	99	50.656	ENSCCAG00000030041	-	94	50.492	Cebus_capucinus
ENSGACG00000004868	xrcc6	99	51.004	ENSCCAG00000030468	-	99	51.004	Cebus_capucinus
ENSGACG00000004868	xrcc6	99	44.590	ENSCCAG00000037663	-	96	44.590	Cebus_capucinus
ENSGACG00000004868	xrcc6	99	54.098	ENSCATG00000042366	XRCC6	99	54.098	Cercocebus_atys
ENSGACG00000004868	xrcc6	99	53.409	ENSCLAG00000016669	XRCC6	99	53.409	Chinchilla_lanigera
ENSGACG00000004868	xrcc6	99	54.098	ENSCSAG00000005784	XRCC6	99	54.098	Chlorocebus_sabaeus
ENSGACG00000004868	xrcc6	99	57.305	ENSCPBG00000020535	XRCC6	99	57.305	Chrysemys_picta_bellii
ENSGACG00000004868	xrcc6	94	33.788	ENSCING00000000633	-	95	33.788	Ciona_intestinalis
ENSGACG00000004868	xrcc6	99	54.098	ENSCANG00000031032	XRCC6	99	54.098	Colobus_angolensis_palliatus
ENSGACG00000004868	xrcc6	99	49.351	ENSCGRG00001019029	Xrcc6	99	49.351	Cricetulus_griseus_chok1gshd
ENSGACG00000004868	xrcc6	99	53.247	ENSCGRG00000001528	Xrcc6	99	53.247	Cricetulus_griseus_crigri
ENSGACG00000004868	xrcc6	99	78.339	ENSCSEG00000020434	xrcc6	99	77.850	Cynoglossus_semilaevis
ENSGACG00000004868	xrcc6	99	80.782	ENSCVAG00000002189	xrcc6	99	80.782	Cyprinodon_variegatus
ENSGACG00000004868	xrcc6	99	72.358	ENSDARG00000071551	xrcc6	100	72.358	Danio_rerio
ENSGACG00000004868	xrcc6	67	51.095	ENSETEG00000015333	-	77	51.095	Echinops_telfairi
ENSGACG00000004868	xrcc6	99	53.409	ENSEASG00005001514	XRCC6	99	53.247	Equus_asinus_asinus
ENSGACG00000004868	xrcc6	100	53.150	ENSECAG00000017563	XRCC6	99	53.697	Equus_caballus
ENSGACG00000004868	xrcc6	99	73.453	ENSELUG00000020301	xrcc6	99	73.453	Esox_lucius
ENSGACG00000004868	xrcc6	99	57.516	ENSFALG00000011908	XRCC6	96	57.680	Ficedula_albicollis
ENSGACG00000004868	xrcc6	99	82.085	ENSFHEG00000016833	xrcc6	99	82.085	Fundulus_heteroclitus
ENSGACG00000004868	xrcc6	99	68.019	ENSGMOG00000013524	xrcc6	100	68.019	Gadus_morhua
ENSGACG00000004868	xrcc6	99	57.749	ENSGALG00000011932	XRCC6	99	57.749	Gallus_gallus
ENSGACG00000004868	xrcc6	99	80.619	ENSGAFG00000008130	xrcc6	99	80.619	Gambusia_affinis
ENSGACG00000004868	xrcc6	99	57.143	ENSGAGG00000017518	XRCC6	99	57.143	Gopherus_agassizii
ENSGACG00000004868	xrcc6	99	54.098	ENSGGOG00000015885	XRCC6	99	54.098	Gorilla_gorilla
ENSGACG00000004868	xrcc6	92	84.629	ENSHBUG00000023281	xrcc6	99	84.629	Haplochromis_burtoni
ENSGACG00000004868	xrcc6	99	53.084	ENSHGLG00000018078	XRCC6	99	53.084	Heterocephalus_glaber_female
ENSGACG00000004868	xrcc6	99	53.084	ENSHGLG00100011264	XRCC6	99	53.084	Heterocephalus_glaber_male
ENSGACG00000004868	xrcc6	99	77.524	ENSHCOG00000009821	xrcc6	99	77.687	Hippocampus_comes
ENSGACG00000004868	xrcc6	99	73.171	ENSIPUG00000000767	xrcc6	100	73.659	Ictalurus_punctatus
ENSGACG00000004868	xrcc6	99	54.221	ENSSTOG00000009490	XRCC6	99	54.221	Ictidomys_tridecemlineatus
ENSGACG00000004868	xrcc6	99	49.757	ENSJJAG00000017136	Xrcc6	99	50.729	Jaculus_jaculus
ENSGACG00000004868	xrcc6	99	83.713	ENSKMAG00000002141	xrcc6	99	83.713	Kryptolebias_marmoratus
ENSGACG00000004868	xrcc6	99	85.644	ENSLBEG00000002691	xrcc6	99	85.644	Labrus_bergylta
ENSGACG00000004868	xrcc6	83	64.646	ENSLOCG00000011533	xrcc6	98	64.646	Lepisosteus_oculatus
ENSGACG00000004868	xrcc6	99	54.098	ENSMFAG00000003352	XRCC6	99	54.098	Macaca_fascicularis
ENSGACG00000004868	xrcc6	99	54.098	ENSMMUG00000001856	XRCC6	99	54.098	Macaca_mulatta
ENSGACG00000004868	xrcc6	99	54.098	ENSMNEG00000035076	XRCC6	99	54.098	Macaca_nemestrina
ENSGACG00000004868	xrcc6	99	54.098	ENSMLEG00000019869	XRCC6	99	54.098	Mandrillus_leucophaeus
ENSGACG00000004868	xrcc6	99	81.922	ENSMAMG00000003368	xrcc6	99	81.922	Mastacembelus_armatus
ENSGACG00000004868	xrcc6	95	82.852	ENSMAMG00000003405	xrcc6	97	82.852	Mastacembelus_armatus
ENSGACG00000004868	xrcc6	99	82.410	ENSMZEG00005028080	xrcc6	99	83.550	Maylandia_zebra
ENSGACG00000004868	xrcc6	99	58.279	ENSMGAG00000012146	XRCC6	99	58.279	Meleagris_gallopavo
ENSGACG00000004868	xrcc6	99	53.607	ENSMAUG00000017340	Xrcc6	99	53.607	Mesocricetus_auratus
ENSGACG00000004868	xrcc6	99	53.647	ENSMOCG00000015717	Xrcc6	100	53.571	Microtus_ochrogaster
ENSGACG00000004868	xrcc6	99	81.209	ENSMMOG00000003536	xrcc6	99	80.719	Mola_mola
ENSGACG00000004868	xrcc6	99	83.306	ENSMALG00000013912	xrcc6	96	84.279	Monopterus_albus
ENSGACG00000004868	xrcc6	99	51.702	MGP_CAROLIEiJ_G0020067	Xrcc6	99	51.299	Mus_caroli
ENSGACG00000004868	xrcc6	99	54.870	ENSMUSG00000022471	Xrcc6	99	57.143	Mus_musculus
ENSGACG00000004868	xrcc6	99	55.592	MGP_PahariEiJ_G0020069	Xrcc6	99	55.195	Mus_pahari
ENSGACG00000004868	xrcc6	95	56.048	MGP_SPRETEiJ_G0020967	Xrcc6	99	56.048	Mus_spretus
ENSGACG00000004868	xrcc6	99	53.770	ENSNGAG00000013750	Xrcc6	99	53.770	Nannospalax_galili
ENSGACG00000004868	xrcc6	99	82.410	ENSNBRG00000004125	xrcc6	99	83.550	Neolamprologus_brichardi
ENSGACG00000004868	xrcc6	94	55.250	ENSOPRG00000002386	XRCC6	99	55.250	Ochotona_princeps
ENSGACG00000004868	xrcc6	99	53.571	ENSODEG00000015847	XRCC6	99	53.571	Octodon_degus
ENSGACG00000004868	xrcc6	99	83.361	ENSONIG00000019715	xrcc6	99	83.361	Oreochromis_niloticus
ENSGACG00000004868	xrcc6	68	58.134	ENSOANG00000011328	XRCC6	99	58.134	Ornithorhynchus_anatinus
ENSGACG00000004868	xrcc6	99	54.426	ENSOCUG00000006948	XRCC6	99	54.426	Oryctolagus_cuniculus
ENSGACG00000004868	xrcc6	99	82.573	ENSORLG00020007820	xrcc6	99	82.573	Oryzias_latipes_hni
ENSGACG00000004868	xrcc6	99	82.248	ENSORLG00015006406	xrcc6	99	82.248	Oryzias_latipes_hsok
ENSGACG00000004868	xrcc6	99	83.550	ENSOMEG00000008998	xrcc6	99	83.550	Oryzias_melastigma
ENSGACG00000004868	xrcc6	99	53.571	ENSOGAG00000008821	XRCC6	100	53.571	Otolemur_garnettii
ENSGACG00000004868	xrcc6	91	53.406	ENSPPAG00000037167	XRCC6	99	53.406	Pan_paniscus
ENSGACG00000004868	xrcc6	99	54.098	ENSPTRG00000045824	XRCC6	99	54.889	Pan_troglodytes
ENSGACG00000004868	xrcc6	99	54.098	ENSPTRG00000022548	XRCC6	99	54.889	Pan_troglodytes
ENSGACG00000004868	xrcc6	99	53.934	ENSPANG00000001252	XRCC6	99	54.701	Papio_anubis
ENSGACG00000004868	xrcc6	99	68.618	ENSPKIG00000003974	xrcc6	100	69.106	Paramormyrops_kingsleyae
ENSGACG00000004868	xrcc6	98	80.231	ENSPMGG00000014220	xrcc6	100	80.395	Periophthalmus_magnuspinnatus
ENSGACG00000004868	xrcc6	99	52.751	ENSPEMG00000023446	Xrcc6	99	52.597	Peromyscus_maniculatus_bairdii
ENSGACG00000004868	xrcc6	99	55.902	ENSPCIG00000026409	XRCC6	99	55.902	Phascolarctos_cinereus
ENSGACG00000004868	xrcc6	99	82.248	ENSPFOG00000017173	xrcc6	99	82.248	Poecilia_formosa
ENSGACG00000004868	xrcc6	99	81.759	ENSPLAG00000000562	xrcc6	99	81.759	Poecilia_latipinna
ENSGACG00000004868	xrcc6	99	82.085	ENSPMEG00000018478	xrcc6	99	82.085	Poecilia_mexicana
ENSGACG00000004868	xrcc6	99	82.039	ENSPREG00000020957	xrcc6	94	82.039	Poecilia_reticulata
ENSGACG00000004868	xrcc6	99	48.525	ENSPPYG00000011876	XRCC6	99	48.361	Pongo_abelii
ENSGACG00000004868	xrcc6	99	52.597	ENSPVAG00000001168	XRCC6	99	52.597	Pteropus_vampyrus
ENSGACG00000004868	xrcc6	99	82.334	ENSPNYG00000003815	xrcc6	99	79.535	Pundamilia_nyererei
ENSGACG00000004868	xrcc6	99	53.571	ENSRNOG00000006392	Xrcc6	99	53.734	Rattus_norvegicus
ENSGACG00000004868	xrcc6	99	49.836	ENSRBIG00000039794	XRCC6	98	51.034	Rhinopithecus_bieti
ENSGACG00000004868	xrcc6	99	54.098	ENSRROG00000030297	XRCC6	99	54.098	Rhinopithecus_roxellana
ENSGACG00000004868	xrcc6	66	49.015	ENSSBOG00000024724	-	98	49.015	Saimiri_boliviensis_boliviensis
ENSGACG00000004868	xrcc6	99	53.809	ENSSHAG00000010790	XRCC6	99	53.809	Sarcophilus_harrisii
ENSGACG00000004868	xrcc6	99	71.057	ENSSFOG00015014409	xrcc6	100	71.057	Scleropages_formosus
ENSGACG00000004868	xrcc6	99	85.342	ENSSMAG00000006496	xrcc6	99	86.645	Scophthalmus_maximus
ENSGACG00000004868	xrcc6	99	85.179	ENSSDUG00000007542	xrcc6	99	86.319	Seriola_dumerili
ENSGACG00000004868	xrcc6	99	84.528	ENSSLDG00000009974	xrcc6	99	85.668	Seriola_lalandi_dorsalis
ENSGACG00000004868	xrcc6	99	57.630	ENSSPUG00000012086	XRCC6	99	57.630	Sphenodon_punctatus
ENSGACG00000004868	xrcc6	99	84.202	ENSSPAG00000015199	xrcc6	99	85.342	Stegastes_partitus
ENSGACG00000004868	xrcc6	95	58.404	ENSTGUG00000009852	-	96	57.912	Taeniopygia_guttata
ENSGACG00000004868	xrcc6	99	78.664	ENSTRUG00000017070	xrcc6	99	78.502	Takifugu_rubripes
ENSGACG00000004868	xrcc6	95	78.849	ENSTNIG00000012947	xrcc6	99	78.849	Tetraodon_nigroviridis
ENSGACG00000004868	xrcc6	94	51.119	ENSTBEG00000011736	XRCC6	99	51.119	Tupaia_belangeri
ENSGACG00000004868	xrcc6	99	45.130	ENSTTRG00000006749	XRCC6	99	45.130	Tursiops_truncatus
ENSGACG00000004868	xrcc6	99	82.248	ENSXMAG00000009691	xrcc6	99	82.248	Xiphophorus_maculatus