EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000004899 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 1774 bases
Position: chrgroupXVII:2970543-2972316
Accession: ZDB-GENE-020419-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006468	zf-U1	PF06220.12	5.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006485	-	450	-	ENSGACP00000006468	149 (aa)	-	G3NMA5

Gene Model

Click here to download ENSGACG00000004899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004899's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004899	snrpc	98	99.315	ENSAPOG00000013907	snrpc	99	99.315	Acanthochromis_polyacanthus
ENSGACG00000004899	snrpc	98	99.315	ENSAOCG00000021151	snrpc	99	99.315	Amphiprion_ocellaris
ENSGACG00000004899	snrpc	98	99.315	ENSAPEG00000023221	snrpc	99	99.315	Amphiprion_percula
ENSGACG00000004899	snrpc	98	99.315	ENSATEG00000025133	snrpc	99	99.315	Anabas_testudineus
ENSGACG00000004899	snrpc	98	97.279	ENSACLG00000000843	snrpc	99	97.279	Astatotilapia_calliptera
ENSGACG00000004899	snrpc	98	97.279	ENSCSEG00000016845	snrpc	99	96.599	Cynoglossus_semilaevis
ENSGACG00000004899	snrpc	98	97.945	ENSCVAG00000014297	snrpc	99	97.945	Cyprinodon_variegatus
ENSGACG00000004899	snrpc	72	98.131	ENSFHEG00000016667	snrpc	96	98.131	Fundulus_heteroclitus
ENSGACG00000004899	snrpc	98	97.945	ENSGMOG00000000090	snrpc	100	97.945	Gadus_morhua
ENSGACG00000004899	snrpc	98	97.945	ENSGAFG00000016115	snrpc	99	97.945	Gambusia_affinis
ENSGACG00000004899	snrpc	98	97.279	ENSHBUG00000011637	snrpc	99	97.279	Haplochromis_burtoni
ENSGACG00000004899	snrpc	98	91.781	ENSHCOG00000001596	snrpc	99	85.616	Hippocampus_comes
ENSGACG00000004899	snrpc	98	97.945	ENSKMAG00000016356	snrpc	99	97.945	Kryptolebias_marmoratus
ENSGACG00000004899	snrpc	99	98.658	ENSLBEG00000023881	snrpc	99	98.639	Labrus_bergylta
ENSGACG00000004899	snrpc	96	58.904	ENSMLEG00000039724	-	81	52.083	Mandrillus_leucophaeus
ENSGACG00000004899	snrpc	98	98.630	ENSMAMG00000003857	snrpc	99	98.630	Mastacembelus_armatus
ENSGACG00000004899	snrpc	98	97.279	ENSMZEG00005002199	snrpc	99	97.279	Maylandia_zebra
ENSGACG00000004899	snrpc	97	98.621	ENSMMOG00000013149	snrpc	100	98.621	Mola_mola
ENSGACG00000004899	snrpc	98	97.260	ENSMALG00000001197	snrpc	99	97.260	Monopterus_albus
ENSGACG00000004899	snrpc	98	97.279	ENSONIG00000014757	snrpc	99	97.279	Oreochromis_niloticus
ENSGACG00000004899	snrpc	94	96.429	ENSORLG00000007308	snrpc	96	96.429	Oryzias_latipes
ENSGACG00000004899	snrpc	96	93.750	ENSORLG00020012607	SNRPC	96	95.745	Oryzias_latipes_hni
ENSGACG00000004899	snrpc	73	96.330	ENSOMEG00000012014	snrpc	68	96.330	Oryzias_melastigma
ENSGACG00000004899	snrpc	95	64.901	ENSOGAG00000028405	-	99	62.252	Otolemur_garnettii
ENSGACG00000004899	snrpc	97	96.552	ENSPMGG00000022162	snrpc	100	96.552	Periophthalmus_magnuspinnatus
ENSGACG00000004899	snrpc	98	97.945	ENSPFOG00000015174	snrpc	99	97.945	Poecilia_formosa
ENSGACG00000004899	snrpc	98	97.945	ENSPLAG00000012311	snrpc	99	97.945	Poecilia_latipinna
ENSGACG00000004899	snrpc	98	97.945	ENSPMEG00000010274	snrpc	99	97.945	Poecilia_mexicana
ENSGACG00000004899	snrpc	100	83.893	ENSPREG00000013017	snrpc	79	84.932	Poecilia_reticulata
ENSGACG00000004899	snrpc	98	82.166	ENSPNAG00000012799	snrpc	99	72.667	Pygocentrus_nattereri
ENSGACG00000004899	snrpc	98	99.315	ENSSMAG00000008029	snrpc	99	99.315	Scophthalmus_maximus
ENSGACG00000004899	snrpc	98	99.315	ENSSDUG00000018895	snrpc	80	99.315	Seriola_dumerili
ENSGACG00000004899	snrpc	98	99.315	ENSSLDG00000005034	snrpc	99	99.315	Seriola_lalandi_dorsalis
ENSGACG00000004899	snrpc	98	99.315	ENSSPAG00000000914	snrpc	99	99.315	Stegastes_partitus
ENSGACG00000004899	snrpc	98	96.575	ENSTRUG00000021651	snrpc	99	96.575	Takifugu_rubripes
ENSGACG00000004899	snrpc	98	97.945	ENSXMAG00000017935	snrpc	99	97.945	Xiphophorus_maculatus