EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000004936 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3715 bases
Position: chrgroupXV:1353983-1357697
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006521	RRM_1	PF00076.22	8.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006538	-	1744	-	ENSGACP00000006521	318 (aa)	-	G3NMF8

Gene Model

Click here to download ENSGACG00000004936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000004936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000004936	-	97	34.568	ENSGACG00000007620	zgc:123010	87	34.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000004936	-	97	35.671	ENSAPOG00000019633	zgc:123010	63	35.671	Acanthochromis_polyacanthus
ENSGACG00000004936	-	80	35.686	ENSAPOG00000001034	-	61	35.686	Acanthochromis_polyacanthus
ENSGACG00000004936	-	95	48.731	ENSAPOG00000022403	-	54	46.330	Acanthochromis_polyacanthus
ENSGACG00000004936	-	99	59.569	ENSAPOG00000005058	si:dkey-33c12.4	53	64.486	Acanthochromis_polyacanthus
ENSGACG00000004936	-	97	37.143	ENSACIG00000021684	zgc:123010	80	37.143	Amphilophus_citrinellus
ENSGACG00000004936	-	97	35.366	ENSAOCG00000005910	zgc:123010	63	35.366	Amphiprion_ocellaris
ENSGACG00000004936	-	99	59.459	ENSAOCG00000020066	si:dkey-33c12.4	55	59.459	Amphiprion_ocellaris
ENSGACG00000004936	-	97	35.671	ENSAPEG00000014305	zgc:123010	66	35.671	Amphiprion_percula
ENSGACG00000004936	-	97	37.231	ENSATEG00000001220	zgc:123010	63	37.231	Anabas_testudineus
ENSGACG00000004936	-	94	36.483	ENSATEG00000018302	-	61	36.243	Anabas_testudineus
ENSGACG00000004936	-	92	35.110	ENSATEG00000022160	-	62	35.110	Anabas_testudineus
ENSGACG00000004936	-	99	61.141	ENSATEG00000018885	si:dkey-33c12.4	57	61.141	Anabas_testudineus
ENSGACG00000004936	-	62	41.919	ENSAPLG00000013566	-	94	41.919	Anas_platyrhynchos
ENSGACG00000004936	-	95	35.347	ENSACLG00000012346	-	63	35.347	Astatotilapia_calliptera
ENSGACG00000004936	-	99	73.446	ENSACLG00000014192	si:dkey-33c12.4	51	73.446	Astatotilapia_calliptera
ENSGACG00000004936	-	78	48.936	ENSACLG00000003019	-	50	48.936	Astatotilapia_calliptera
ENSGACG00000004936	-	97	35.474	ENSACLG00000010188	zgc:123010	64	35.474	Astatotilapia_calliptera
ENSGACG00000004936	-	91	48.308	ENSAMXG00000010871	si:dkey-33c12.4	52	48.308	Astyanax_mexicanus
ENSGACG00000004936	-	97	38.608	ENSAMXG00000041967	zgc:123010	56	39.731	Astyanax_mexicanus
ENSGACG00000004936	-	97	34.232	ENSCPBG00000024454	-	54	34.232	Chrysemys_picta_bellii
ENSGACG00000004936	-	89	46.766	ENSCSEG00000002755	-	55	46.766	Cynoglossus_semilaevis
ENSGACG00000004936	-	97	37.423	ENSCVAG00000013288	zgc:123010	63	37.117	Cyprinodon_variegatus
ENSGACG00000004936	-	97	56.712	ENSCVAG00000006564	-	57	56.403	Cyprinodon_variegatus
ENSGACG00000004936	-	92	43.750	ENSDARG00000057890	si:dkey-33c12.4	52	44.242	Danio_rerio
ENSGACG00000004936	-	97	36.137	ENSDARG00000039082	zgc:123010	66	36.137	Danio_rerio
ENSGACG00000004936	-	80	35.664	ENSEBUG00000001368	-	50	35.959	Eptatretus_burgeri
ENSGACG00000004936	-	97	34.472	ENSELUG00000022008	zgc:123010	77	34.472	Esox_lucius
ENSGACG00000004936	-	97	34.783	ENSELUG00000021447	-	64	35.331	Esox_lucius
ENSGACG00000004936	-	96	43.923	ENSELUG00000002009	si:dkey-33c12.4	89	47.557	Esox_lucius
ENSGACG00000004936	-	93	39.718	ENSELUG00000001633	-	55	39.828	Esox_lucius
ENSGACG00000004936	-	75	32.246	ENSFALG00000008867	-	100	32.246	Ficedula_albicollis
ENSGACG00000004936	-	99	57.373	ENSFHEG00000005521	si:dkey-33c12.4	58	59.016	Fundulus_heteroclitus
ENSGACG00000004936	-	97	35.404	ENSFHEG00000002306	zgc:123010	63	35.404	Fundulus_heteroclitus
ENSGACG00000004936	-	97	34.675	ENSGMOG00000018473	zgc:123010	87	35.294	Gadus_morhua
ENSGACG00000004936	-	79	52.569	ENSGMOG00000001292	-	100	52.569	Gadus_morhua
ENSGACG00000004936	-	72	36.434	ENSGALG00000036747	TTC31	50	36.434	Gallus_gallus
ENSGACG00000004936	-	97	35.061	ENSGAFG00000009373	zgc:123010	63	35.061	Gambusia_affinis
ENSGACG00000004936	-	95	35.347	ENSHBUG00000016720	-	63	35.347	Haplochromis_burtoni
ENSGACG00000004936	-	96	48.824	ENSIPUG00000005998	si:dkey-33c12.4	55	48.824	Ictalurus_punctatus
ENSGACG00000004936	-	97	60.763	ENSKMAG00000016610	si:dkey-33c12.4	57	61.580	Kryptolebias_marmoratus
ENSGACG00000004936	-	97	36.111	ENSKMAG00000021350	zgc:123010	63	36.111	Kryptolebias_marmoratus
ENSGACG00000004936	-	82	58.567	ENSLBEG00000017203	-	54	59.813	Labrus_bergylta
ENSGACG00000004936	-	90	37.396	ENSLBEG00000028046	-	56	37.396	Labrus_bergylta
ENSGACG00000004936	-	97	36.223	ENSLBEG00000023984	zgc:123010	63	36.223	Labrus_bergylta
ENSGACG00000004936	-	93	34.405	ENSLBEG00000013518	-	61	34.405	Labrus_bergylta
ENSGACG00000004936	-	98	59.677	ENSLBEG00000021088	-	59	59.677	Labrus_bergylta
ENSGACG00000004936	-	98	35.276	ENSLACG00000009001	zgc:123010	71	35.276	Latimeria_chalumnae
ENSGACG00000004936	-	88	36.585	ENSLACG00000004602	-	59	36.585	Latimeria_chalumnae
ENSGACG00000004936	-	92	42.651	ENSLOCG00000001861	-	54	43.516	Lepisosteus_oculatus
ENSGACG00000004936	-	91	36.039	ENSLOCG00000008967	zgc:123010	61	36.688	Lepisosteus_oculatus
ENSGACG00000004936	-	97	36.792	ENSMAMG00000003439	-	89	36.792	Mastacembelus_armatus
ENSGACG00000004936	-	92	36.218	ENSMAMG00000001145	zgc:123010	76	36.218	Mastacembelus_armatus
ENSGACG00000004936	-	85	37.193	ENSMAMG00000002460	-	70	37.193	Mastacembelus_armatus
ENSGACG00000004936	-	85	36.842	ENSMAMG00000002377	-	67	36.842	Mastacembelus_armatus
ENSGACG00000004936	-	85	39.209	ENSMAMG00000003394	-	76	39.209	Mastacembelus_armatus
ENSGACG00000004936	-	96	35.030	ENSMZEG00005014740	-	81	35.030	Maylandia_zebra
ENSGACG00000004936	-	78	48.936	ENSMZEG00005000585	-	50	48.936	Maylandia_zebra
ENSGACG00000004936	-	97	35.474	ENSMZEG00005027733	zgc:123010	64	35.474	Maylandia_zebra
ENSGACG00000004936	-	87	38.014	ENSMMOG00000010544	zgc:123010	64	38.014	Mola_mola
ENSGACG00000004936	-	84	32.646	ENSMMOG00000017955	-	70	32.646	Mola_mola
ENSGACG00000004936	-	97	35.976	ENSMALG00000017698	zgc:123010	63	35.976	Monopterus_albus
ENSGACG00000004936	-	95	61.496	ENSMALG00000002265	si:dkey-33c12.4	60	60.695	Monopterus_albus
ENSGACG00000004936	-	87	35.274	ENSNBRG00000021157	zgc:123010	66	35.274	Neolamprologus_brichardi
ENSGACG00000004936	-	82	46.500	ENSONIG00000007538	-	95	47.773	Oreochromis_niloticus
ENSGACG00000004936	-	85	35.906	ENSONIG00000000297	-	97	35.906	Oreochromis_niloticus
ENSGACG00000004936	-	95	69.408	ENSONIG00000012263	-	99	68.387	Oreochromis_niloticus
ENSGACG00000004936	-	97	33.739	ENSONIG00000018353	zgc:123010	67	33.739	Oreochromis_niloticus
ENSGACG00000004936	-	98	56.986	ENSORLG00000029651	si:dkey-33c12.4	59	57.300	Oryzias_latipes
ENSGACG00000004936	-	82	45.022	ENSORLG00000030385	-	54	45.022	Oryzias_latipes
ENSGACG00000004936	-	81	36.364	ENSORLG00000007675	zgc:123010	56	36.364	Oryzias_latipes
ENSGACG00000004936	-	81	36.742	ENSORLG00020003457	zgc:123010	56	36.742	Oryzias_latipes_hni
ENSGACG00000004936	-	98	57.576	ENSORLG00020008750	si:dkey-33c12.4	53	58.757	Oryzias_latipes_hni
ENSGACG00000004936	-	82	43.534	ENSORLG00015008400	-	54	43.723	Oryzias_latipes_hsok
ENSGACG00000004936	-	97	34.862	ENSORLG00015008373	zgc:123010	63	34.862	Oryzias_latipes_hsok
ENSGACG00000004936	-	97	35.168	ENSOMEG00000003408	zgc:123010	63	35.168	Oryzias_melastigma
ENSGACG00000004936	-	82	43.952	ENSOMEG00000009428	-	53	43.952	Oryzias_melastigma
ENSGACG00000004936	-	95	58.640	ENSOMEG00000008913	-	54	58.640	Oryzias_melastigma
ENSGACG00000004936	-	95	44.767	ENSPKIG00000011819	-	53	44.767	Paramormyrops_kingsleyae
ENSGACG00000004936	-	97	35.604	ENSPKIG00000015521	zgc:123010	71	35.604	Paramormyrops_kingsleyae
ENSGACG00000004936	-	90	36.806	ENSPMGG00000020251	zgc:123010	66	36.806	Periophthalmus_magnuspinnatus
ENSGACG00000004936	-	71	44.000	ENSPMAG00000009352	-	76	44.000	Petromyzon_marinus
ENSGACG00000004936	-	85	35.439	ENSPMAG00000004544	zgc:123010	98	35.439	Petromyzon_marinus
ENSGACG00000004936	-	79	39.216	ENSPFOG00000017092	-	67	38.037	Poecilia_formosa
ENSGACG00000004936	-	97	36.697	ENSPFOG00000001073	zgc:123010	63	36.697	Poecilia_formosa
ENSGACG00000004936	-	97	36.697	ENSPLAG00000007711	zgc:123010	63	36.697	Poecilia_latipinna
ENSGACG00000004936	-	97	36.697	ENSPMEG00000005092	zgc:123010	63	36.697	Poecilia_mexicana
ENSGACG00000004936	-	87	36.934	ENSPREG00000019587	zgc:123010	66	36.934	Poecilia_reticulata
ENSGACG00000004936	-	97	35.583	ENSPNYG00000007893	zgc:123010	64	35.583	Pundamilia_nyererei
ENSGACG00000004936	-	78	48.936	ENSPNYG00000001047	-	50	48.936	Pundamilia_nyererei
ENSGACG00000004936	-	95	32.335	ENSPNYG00000023304	-	80	32.335	Pundamilia_nyererei
ENSGACG00000004936	-	97	36.709	ENSPNAG00000007579	zgc:123010	62	37.342	Pygocentrus_nattereri
ENSGACG00000004936	-	95	45.217	ENSPNAG00000018386	si:dkey-33c12.4	55	45.217	Pygocentrus_nattereri
ENSGACG00000004936	-	92	42.733	ENSSFOG00015009199	-	56	42.733	Scleropages_formosus
ENSGACG00000004936	-	91	44.548	ENSSFOG00015005186	-	54	44.410	Scleropages_formosus
ENSGACG00000004936	-	97	33.036	ENSSFOG00015021394	zgc:123010	67	33.036	Scleropages_formosus
ENSGACG00000004936	-	97	36.308	ENSSMAG00000002904	zgc:123010	63	37.171	Scophthalmus_maximus
ENSGACG00000004936	-	92	33.333	ENSSMAG00000021096	-	60	33.333	Scophthalmus_maximus
ENSGACG00000004936	-	97	36.280	ENSSDUG00000008651	zgc:123010	63	36.280	Seriola_dumerili
ENSGACG00000004936	-	100	62.533	ENSSDUG00000003213	si:dkey-33c12.4	62	62.269	Seriola_dumerili
ENSGACG00000004936	-	92	34.906	ENSSDUG00000014026	-	61	35.737	Seriola_dumerili
ENSGACG00000004936	-	97	36.280	ENSSLDG00000019386	zgc:123010	65	36.280	Seriola_lalandi_dorsalis
ENSGACG00000004936	-	100	63.325	ENSSLDG00000009448	si:dkey-33c12.4	58	62.797	Seriola_lalandi_dorsalis
ENSGACG00000004936	-	95	60.111	ENSSPAG00000022577	-	56	59.677	Stegastes_partitus
ENSGACG00000004936	-	97	35.976	ENSSPAG00000013621	zgc:123010	63	35.976	Stegastes_partitus
ENSGACG00000004936	-	90	35.831	ENSTRUG00000024824	zgc:123010	60	35.831	Takifugu_rubripes
ENSGACG00000004936	-	84	41.319	ENSTRUG00000000057	-	54	41.319	Takifugu_rubripes
ENSGACG00000004936	-	95	51.966	ENSTRUG00000022374	si:dkey-33c12.4	53	51.966	Takifugu_rubripes
ENSGACG00000004936	-	87	35.714	ENSTNIG00000001303	zgc:123010	89	35.714	Tetraodon_nigroviridis
ENSGACG00000004936	-	76	45.868	ENSTNIG00000001154	-	100	45.868	Tetraodon_nigroviridis
ENSGACG00000004936	-	91	65.052	ENSTNIG00000010542	-	99	62.300	Tetraodon_nigroviridis
ENSGACG00000004936	-	85	37.319	ENSXETG00000033896	-	96	37.319	Xenopus_tropicalis
ENSGACG00000004936	-	89	34.824	ENSXCOG00000012281	zgc:123010	72	34.824	Xiphophorus_couchianus
ENSGACG00000004936	-	97	36.391	ENSXMAG00000002598	zgc:123010	63	36.391	Xiphophorus_maculatus