EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005045 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 14566 bases
Position: chrgroupXIII:2571887-2586452
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006667	DZF	PF07528.14	1.7e-67	1	1
ENSGACP00000006675	DZF	PF07528.14	6.1e-66	1	1
ENSGACP00000006675	zf-met	PF12874.7	1.9e-21	1	3
ENSGACP00000006675	zf-met	PF12874.7	1.9e-21	2	3
ENSGACP00000006675	zf-met	PF12874.7	1.9e-21	3	3
ENSGACP00000006667	zf-met	PF12874.7	2.4e-21	1	3
ENSGACP00000006667	zf-met	PF12874.7	2.4e-21	2	3
ENSGACP00000006667	zf-met	PF12874.7	2.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006692	-	3048	-	ENSGACP00000006675	1015 (aa)	-	G3NMW2
ENSGACT00000006684	-	3273	-	ENSGACP00000006667	1091 (aa)	-	G3NMV4

Gene Model

Click here to download ENSGACG00000005045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005045's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005045	zfr	98	50.808	ENSGACG00000010658	zfr2	99	50.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005045	zfr	100	72.858	ENSG00000056097	ZFR	99	73.418	Homo_sapiens
ENSGACG00000005045	zfr	100	77.316	ENSAPOG00000009740	zfr	99	78.851	Acanthochromis_polyacanthus
ENSGACG00000005045	zfr	100	73.014	ENSAMEG00000006184	ZFR	99	73.665	Ailuropoda_melanoleuca
ENSGACG00000005045	zfr	93	85.091	ENSACIG00000015926	zfr	99	80.045	Amphilophus_citrinellus
ENSGACG00000005045	zfr	100	82.214	ENSAOCG00000013876	zfr	99	83.059	Amphiprion_ocellaris
ENSGACG00000005045	zfr	100	84.797	ENSAPEG00000024383	zfr	99	85.558	Amphiprion_percula
ENSGACG00000005045	zfr	100	85.199	ENSATEG00000010271	zfr	99	85.256	Anabas_testudineus
ENSGACG00000005045	zfr	79	71.742	ENSAPLG00000015627	-	100	72.497	Anas_platyrhynchos
ENSGACG00000005045	zfr	100	72.152	ENSACAG00000007880	ZFR	99	72.142	Anolis_carolinensis
ENSGACG00000005045	zfr	100	72.768	ENSANAG00000023333	ZFR	99	73.418	Aotus_nancymaae
ENSGACG00000005045	zfr	93	84.364	ENSACLG00000016832	zfr	99	79.596	Astatotilapia_calliptera
ENSGACG00000005045	zfr	100	79.245	ENSAMXG00000019511	zfr	99	79.962	Astyanax_mexicanus
ENSGACG00000005045	zfr	100	73.014	ENSBTAG00000008414	ZFR	99	73.881	Bos_taurus
ENSGACG00000005045	zfr	100	72.768	ENSCJAG00000018740	ZFR	99	73.418	Callithrix_jacchus
ENSGACG00000005045	zfr	100	70.798	ENSCAFG00000018886	ZFR	99	73.535	Canis_familiaris
ENSGACG00000005045	zfr	100	73.014	ENSCAFG00020016859	-	99	73.665	Canis_lupus_dingo
ENSGACG00000005045	zfr	100	73.014	ENSCHIG00000007710	ZFR	99	73.575	Capra_hircus
ENSGACG00000005045	zfr	98	73.147	ENSTSYG00000010670	ZFR	97	74.131	Carlito_syrichta
ENSGACG00000005045	zfr	98	59.783	ENSCAPG00000015655	ZFR	99	59.700	Cavia_aperea
ENSGACG00000005045	zfr	91	76.860	ENSCPOG00000000862	ZFR	99	68.293	Cavia_porcellus
ENSGACG00000005045	zfr	100	72.678	ENSCCAG00000024473	ZFR	99	73.327	Cebus_capucinus
ENSGACG00000005045	zfr	100	72.768	ENSCATG00000038311	ZFR	99	73.418	Cercocebus_atys
ENSGACG00000005045	zfr	99	72.545	ENSCLAG00000007408	ZFR	99	74.366	Chinchilla_lanigera
ENSGACG00000005045	zfr	100	72.858	ENSCSAG00000017180	ZFR	99	73.599	Chlorocebus_sabaeus
ENSGACG00000005045	zfr	91	62.810	ENSCHOG00000003848	ZFR	93	62.963	Choloepus_hoffmanni
ENSGACG00000005045	zfr	100	73.736	ENSCPBG00000024211	ZFR	99	74.429	Chrysemys_picta_bellii
ENSGACG00000005045	zfr	100	72.678	ENSCANG00000017807	ZFR	99	73.327	Colobus_angolensis_palliatus
ENSGACG00000005045	zfr	100	73.399	ENSCGRG00001016009	Zfr	99	74.179	Cricetulus_griseus_chok1gshd
ENSGACG00000005045	zfr	99	73.029	ENSCGRG00000001228	Zfr	97	74.135	Cricetulus_griseus_crigri
ENSGACG00000005045	zfr	94	81.741	ENSCSEG00000009224	zfr	86	88.546	Cynoglossus_semilaevis
ENSGACG00000005045	zfr	99	82.129	ENSCSEG00000011169	ZFR	99	81.113	Cynoglossus_semilaevis
ENSGACG00000005045	zfr	99	82.044	ENSCVAG00000016494	zfr	99	83.028	Cyprinodon_variegatus
ENSGACG00000005045	zfr	100	77.939	ENSDARG00000027109	zfr	99	79.656	Danio_rerio
ENSGACG00000005045	zfr	100	72.864	ENSDNOG00000008852	ZFR	99	73.770	Dasypus_novemcinctus
ENSGACG00000005045	zfr	100	72.735	ENSDORG00000016643	Zfr	99	73.641	Dipodomys_ordii
ENSGACG00000005045	zfr	100	68.431	ENSETEG00000008937	ZFR	99	70.119	Echinops_telfairi
ENSGACG00000005045	zfr	50	59.963	ENSEBUG00000012503	-	94	60.000	Eptatretus_burgeri
ENSGACG00000005045	zfr	100	72.693	ENSEASG00005007104	ZFR	99	73.303	Equus_asinus_asinus
ENSGACG00000005045	zfr	82	70.318	ENSECAG00000012851	ZFR	99	71.614	Equus_caballus
ENSGACG00000005045	zfr	95	65.110	ENSEEUG00000014206	ZFR	83	76.786	Erinaceus_europaeus
ENSGACG00000005045	zfr	99	70.377	ENSELUG00000022743	zfr	97	71.079	Esox_lucius
ENSGACG00000005045	zfr	100	72.924	ENSFCAG00000000354	ZFR	99	73.575	Felis_catus
ENSGACG00000005045	zfr	100	75.459	ENSFALG00000002149	ZFR	97	75.752	Ficedula_albicollis
ENSGACG00000005045	zfr	100	72.248	ENSFDAG00000012993	ZFR	99	72.553	Fukomys_damarensis
ENSGACG00000005045	zfr	63	75.307	ENSFHEG00000012064	zfr	94	81.184	Fundulus_heteroclitus
ENSGACG00000005045	zfr	100	70.647	ENSGMOG00000003967	zfr	92	91.935	Gadus_morhua
ENSGACG00000005045	zfr	100	74.057	ENSGALG00000034488	-	99	73.521	Gallus_gallus
ENSGACG00000005045	zfr	100	73.958	ENSGALG00000003235	-	99	74.135	Gallus_gallus
ENSGACG00000005045	zfr	99	63.967	ENSGAFG00000016229	zfr	99	75.431	Gambusia_affinis
ENSGACG00000005045	zfr	95	73.403	ENSGAGG00000013544	ZFR	99	74.071	Gopherus_agassizii
ENSGACG00000005045	zfr	100	72.949	ENSGGOG00000016302	ZFR	99	73.418	Gorilla_gorilla
ENSGACG00000005045	zfr	100	72.498	ENSHGLG00000008088	ZFR	99	73.146	Heterocephalus_glaber_female
ENSGACG00000005045	zfr	98	72.666	ENSHGLG00100016776	ZFR	97	73.649	Heterocephalus_glaber_male
ENSGACG00000005045	zfr	100	80.416	ENSHCOG00000001548	zfr	99	80.530	Hippocampus_comes
ENSGACG00000005045	zfr	100	79.699	ENSIPUG00000008192	zfr	99	80.200	Ictalurus_punctatus
ENSGACG00000005045	zfr	100	73.164	ENSSTOG00000008742	ZFR	99	73.818	Ictidomys_tridecemlineatus
ENSGACG00000005045	zfr	98	69.653	ENSJJAG00000023064	Zfr	97	69.152	Jaculus_jaculus
ENSGACG00000005045	zfr	92	81.836	ENSKMAG00000009468	zfr	99	82.527	Kryptolebias_marmoratus
ENSGACG00000005045	zfr	100	80.682	ENSLBEG00000010783	zfr	99	81.918	Labrus_bergylta
ENSGACG00000005045	zfr	100	70.853	ENSLACG00000000831	ZFR	99	71.623	Latimeria_chalumnae
ENSGACG00000005045	zfr	99	77.030	ENSLOCG00000006727	zfr	99	77.252	Lepisosteus_oculatus
ENSGACG00000005045	zfr	99	74.364	ENSLAFG00000002308	ZFR	99	75.520	Loxodonta_africana
ENSGACG00000005045	zfr	100	72.719	ENSMFAG00000042691	ZFR	99	72.514	Macaca_fascicularis
ENSGACG00000005045	zfr	100	72.768	ENSMMUG00000001317	ZFR	99	73.418	Macaca_mulatta
ENSGACG00000005045	zfr	100	72.768	ENSMNEG00000029441	ZFR	99	73.418	Macaca_nemestrina
ENSGACG00000005045	zfr	99	72.937	ENSMLEG00000028503	ZFR	99	73.917	Mandrillus_leucophaeus
ENSGACG00000005045	zfr	100	85.024	ENSMAMG00000017351	zfr	99	84.369	Mastacembelus_armatus
ENSGACG00000005045	zfr	93	84.364	ENSMZEG00005021243	zfr	99	79.596	Maylandia_zebra
ENSGACG00000005045	zfr	98	63.320	ENSMGAG00000002841	ZFR	98	63.269	Meleagris_gallopavo
ENSGACG00000005045	zfr	100	73.129	ENSMAUG00000000976	Zfr	99	73.327	Mesocricetus_auratus
ENSGACG00000005045	zfr	100	72.907	ENSMICG00000001244	ZFR	99	73.689	Microcebus_murinus
ENSGACG00000005045	zfr	100	73.309	ENSMOCG00000018630	Zfr	99	73.960	Microtus_ochrogaster
ENSGACG00000005045	zfr	100	79.112	ENSMMOG00000012585	zfr	99	78.013	Mola_mola
ENSGACG00000005045	zfr	100	73.423	ENSMODG00000020412	ZFR	99	74.294	Monodelphis_domestica
ENSGACG00000005045	zfr	100	79.677	ENSMALG00000007123	zfr	93	95.161	Monopterus_albus
ENSGACG00000005045	zfr	100	73.039	MGP_CAROLIEiJ_G0019681	Zfr	100	77.181	Mus_caroli
ENSGACG00000005045	zfr	100	73.219	ENSMUSG00000022201	Zfr	99	77.181	Mus_musculus
ENSGACG00000005045	zfr	100	73.129	MGP_PahariEiJ_G0016057	Zfr	100	77.517	Mus_pahari
ENSGACG00000005045	zfr	100	73.001	MGP_SPRETEiJ_G0020574	Zfr	100	77.181	Mus_spretus
ENSGACG00000005045	zfr	74	69.634	ENSMPUG00000015193	-	99	71.205	Mustela_putorius_furo
ENSGACG00000005045	zfr	99	72.893	ENSMLUG00000011797	ZFR	98	74.181	Myotis_lucifugus
ENSGACG00000005045	zfr	100	73.129	ENSNGAG00000018328	Zfr	99	73.779	Nannospalax_galili
ENSGACG00000005045	zfr	93	81.333	ENSNBRG00000008378	zfr	99	77.974	Neolamprologus_brichardi
ENSGACG00000005045	zfr	99	72.841	ENSNLEG00000014098	ZFR	99	73.917	Nomascus_leucogenys
ENSGACG00000005045	zfr	98	67.627	ENSMEUG00000010225	ZFR	99	69.163	Notamacropus_eugenii
ENSGACG00000005045	zfr	83	79.200	ENSOPRG00000016756	ZFR	83	79.747	Ochotona_princeps
ENSGACG00000005045	zfr	98	73.218	ENSODEG00000001990	ZFR	99	74.537	Octodon_degus
ENSGACG00000005045	zfr	100	64.183	ENSONIG00000013960	zfr	77	81.418	Oreochromis_niloticus
ENSGACG00000005045	zfr	98	74.046	ENSOANG00000014434	ZFR	98	74.976	Ornithorhynchus_anatinus
ENSGACG00000005045	zfr	100	72.858	ENSOCUG00000016737	ZFR	99	73.418	Oryctolagus_cuniculus
ENSGACG00000005045	zfr	99	80.645	ENSORLG00000017243	zfr	99	79.817	Oryzias_latipes
ENSGACG00000005045	zfr	99	80.740	ENSORLG00020014823	zfr	99	79.909	Oryzias_latipes_hni
ENSGACG00000005045	zfr	99	80.645	ENSORLG00015005801	zfr	99	79.817	Oryzias_latipes_hsok
ENSGACG00000005045	zfr	99	81.439	ENSOMEG00000003336	zfr	99	80.913	Oryzias_melastigma
ENSGACG00000005045	zfr	100	71.081	ENSOGAG00000015117	ZFR	99	71.635	Otolemur_garnettii
ENSGACG00000005045	zfr	99	72.762	ENSOARG00000012233	ZFR	99	73.410	Ovis_aries
ENSGACG00000005045	zfr	99	72.450	ENSPPAG00000027447	ZFR	98	73.699	Pan_paniscus
ENSGACG00000005045	zfr	100	72.924	ENSPPRG00000008253	ZFR	99	73.575	Panthera_pardus
ENSGACG00000005045	zfr	99	72.615	ENSPTIG00000010038	ZFR	99	71.520	Panthera_tigris_altaica
ENSGACG00000005045	zfr	100	72.858	ENSPTRG00000016771	ZFR	99	73.418	Pan_troglodytes
ENSGACG00000005045	zfr	100	71.623	ENSPANG00000003729	ZFR	99	72.182	Papio_anubis
ENSGACG00000005045	zfr	99	78.430	ENSPKIG00000016781	ZFR	99	79.139	Paramormyrops_kingsleyae
ENSGACG00000005045	zfr	99	71.543	ENSPKIG00000007596	ZFR	99	73.171	Paramormyrops_kingsleyae
ENSGACG00000005045	zfr	53	80.692	ENSPSIG00000005779	ZFR	96	81.192	Pelodiscus_sinensis
ENSGACG00000005045	zfr	100	72.649	ENSPMGG00000015984	zfr	99	72.618	Periophthalmus_magnuspinnatus
ENSGACG00000005045	zfr	97	71.295	ENSPEMG00000014573	Zfr	99	72.693	Peromyscus_maniculatus_bairdii
ENSGACG00000005045	zfr	100	73.423	ENSPCIG00000020906	ZFR	99	74.294	Phascolarctos_cinereus
ENSGACG00000005045	zfr	99	81.102	ENSPFOG00000005931	zfr	99	80.878	Poecilia_formosa
ENSGACG00000005045	zfr	99	81.351	ENSPREG00000011947	zfr	99	81.193	Poecilia_reticulata
ENSGACG00000005045	zfr	99	72.649	ENSPPYG00000015378	ZFR	98	73.628	Pongo_abelii
ENSGACG00000005045	zfr	100	65.825	ENSPCAG00000007277	ZFR	99	67.518	Procavia_capensis
ENSGACG00000005045	zfr	95	72.718	ENSPCOG00000000045	ZFR	99	73.308	Propithecus_coquereli
ENSGACG00000005045	zfr	94	77.108	ENSPVAG00000004780	ZFR	92	77.778	Pteropus_vampyrus
ENSGACG00000005045	zfr	93	84.242	ENSPNYG00000006239	zfr	99	79.484	Pundamilia_nyererei
ENSGACG00000005045	zfr	100	79.887	ENSPNAG00000025151	zfr	99	80.292	Pygocentrus_nattereri
ENSGACG00000005045	zfr	100	73.219	ENSRNOG00000011627	Zfr	99	73.779	Rattus_norvegicus
ENSGACG00000005045	zfr	100	72.678	ENSRBIG00000041561	ZFR	99	73.327	Rhinopithecus_bieti
ENSGACG00000005045	zfr	100	72.678	ENSRROG00000044008	ZFR	99	73.679	Rhinopithecus_roxellana
ENSGACG00000005045	zfr	98	72.955	ENSSBOG00000024150	ZFR	98	73.745	Saimiri_boliviensis_boliviensis
ENSGACG00000005045	zfr	98	73.704	ENSSHAG00000015478	ZFR	99	74.927	Sarcophilus_harrisii
ENSGACG00000005045	zfr	99	74.427	ENSSFOG00015017300	ZFR	97	74.421	Scleropages_formosus
ENSGACG00000005045	zfr	100	84.363	ENSSMAG00000000320	zfr	99	85.168	Scophthalmus_maximus
ENSGACG00000005045	zfr	100	85.417	ENSSDUG00000013882	zfr	99	85.101	Seriola_dumerili
ENSGACG00000005045	zfr	93	86.076	ENSSLDG00000000762	zfr	99	79.418	Seriola_lalandi_dorsalis
ENSGACG00000005045	zfr	91	80.000	ENSSARG00000006571	ZFR	92	80.660	Sorex_araneus
ENSGACG00000005045	zfr	98	74.470	ENSSPUG00000016786	ZFR	99	74.805	Sphenodon_punctatus
ENSGACG00000005045	zfr	100	85.539	ENSSPAG00000019293	zfr	99	86.197	Stegastes_partitus
ENSGACG00000005045	zfr	100	73.195	ENSSSCG00000027681	ZFR	99	74.064	Sus_scrofa
ENSGACG00000005045	zfr	100	73.433	ENSTGUG00000001909	ZFR	99	73.193	Taeniopygia_guttata
ENSGACG00000005045	zfr	100	83.602	ENSTRUG00000016620	zfr	99	83.623	Takifugu_rubripes
ENSGACG00000005045	zfr	58	79.768	ENSTNIG00000018856	zfr	98	78.814	Tetraodon_nigroviridis
ENSGACG00000005045	zfr	94	69.759	ENSTBEG00000017687	ZFR	93	69.784	Tupaia_belangeri
ENSGACG00000005045	zfr	98	71.387	ENSTTRG00000017321	ZFR	99	69.502	Tursiops_truncatus
ENSGACG00000005045	zfr	79	71.209	ENSUAMG00000000172	-	99	72.248	Ursus_americanus
ENSGACG00000005045	zfr	79	71.209	ENSUMAG00000013805	-	99	72.248	Ursus_maritimus
ENSGACG00000005045	zfr	98	73.410	ENSVPAG00000011011	ZFR	99	71.598	Vicugna_pacos
ENSGACG00000005045	zfr	100	72.924	ENSVVUG00000022171	-	99	73.575	Vulpes_vulpes
ENSGACG00000005045	zfr	100	70.571	ENSXETG00000015598	zfr	97	72.255	Xenopus_tropicalis
ENSGACG00000005045	zfr	99	81.654	ENSXCOG00000009361	zfr	99	80.952	Xiphophorus_couchianus
ENSGACG00000005045	zfr	99	81.749	ENSXMAG00000013356	zfr	99	81.044	Xiphophorus_maculatus