EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005050 (Gene tree)
Gene ID: -
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 8546 bases
Position: chrgroupVIII:3801968-3810513
Accession: ZDB-GENE-041014-189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006682	TRM	PF02005.16	2.6e-67	1	2
ENSGACP00000006682	TRM	PF02005.16	2.6e-67	2	2
ENSGACP00000006693	TRM	PF02005.16	4.5e-67	1	2
ENSGACP00000006693	TRM	PF02005.16	4.5e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006699	-	2351	-	ENSGACP00000006682	556 (aa)	-	G3NMW9
ENSGACT00000006710	-	2129	-	ENSGACP00000006693	642 (aa)	-	G3NMY0

Gene Model

Click here to download ENSGACG00000005050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005050	trmt1l	98	62.480	ENSG00000121486	TRMT1L	99	70.000	Homo_sapiens
ENSGACG00000005050	trmt1l	99	87.234	ENSAPOG00000011807	trmt1l	99	79.343	Acanthochromis_polyacanthus
ENSGACG00000005050	trmt1l	97	62.637	ENSAMEG00000013538	TRMT1L	84	62.162	Ailuropoda_melanoleuca
ENSGACG00000005050	trmt1l	88	84.553	ENSACIG00000012049	trmt1l	95	84.553	Amphilophus_citrinellus
ENSGACG00000005050	trmt1l	99	86.879	ENSAOCG00000018112	trmt1l	99	84.169	Amphiprion_ocellaris
ENSGACG00000005050	trmt1l	99	86.525	ENSAPEG00000021433	trmt1l	99	84.759	Amphiprion_percula
ENSGACG00000005050	trmt1l	99	89.027	ENSATEG00000004573	trmt1l	99	89.491	Anabas_testudineus
ENSGACG00000005050	trmt1l	98	65.091	ENSAPLG00000008394	TRMT1L	88	63.665	Anas_platyrhynchos
ENSGACG00000005050	trmt1l	97	63.419	ENSACAG00000002342	TRMT1L	85	61.882	Anolis_carolinensis
ENSGACG00000005050	trmt1l	98	62.639	ENSANAG00000038162	TRMT1L	85	62.798	Aotus_nancymaae
ENSGACG00000005050	trmt1l	99	86.903	ENSACLG00000021625	trmt1l	92	84.759	Astatotilapia_calliptera
ENSGACG00000005050	trmt1l	98	81.295	ENSAMXG00000009602	trmt1l	88	80.472	Astyanax_mexicanus
ENSGACG00000005050	trmt1l	97	63.803	ENSBTAG00000011285	TRMT1L	84	62.540	Bos_taurus
ENSGACG00000005050	trmt1l	98	62.639	ENSCJAG00000005456	TRMT1L	85	62.798	Callithrix_jacchus
ENSGACG00000005050	trmt1l	98	62.480	ENSCAFG00000013518	TRMT1L	83	62.639	Canis_familiaris
ENSGACG00000005050	trmt1l	98	62.085	ENSCAFG00020015640	TRMT1L	84	62.639	Canis_lupus_dingo
ENSGACG00000005050	trmt1l	97	63.504	ENSCHIG00000016522	TRMT1L	84	62.282	Capra_hircus
ENSGACG00000005050	trmt1l	98	62.321	ENSTSYG00000010465	TRMT1L	86	62.321	Carlito_syrichta
ENSGACG00000005050	trmt1l	76	62.449	ENSCAPG00000012562	TRMT1L	81	62.857	Cavia_aperea
ENSGACG00000005050	trmt1l	97	63.187	ENSCPOG00000001567	TRMT1L	86	62.003	Cavia_porcellus
ENSGACG00000005050	trmt1l	98	61.927	ENSCCAG00000018699	TRMT1L	85	62.480	Cebus_capucinus
ENSGACG00000005050	trmt1l	98	62.798	ENSCATG00000043114	TRMT1L	84	62.957	Cercocebus_atys
ENSGACG00000005050	trmt1l	98	48.649	ENSCLAG00000010853	-	82	48.808	Chinchilla_lanigera
ENSGACG00000005050	trmt1l	97	64.103	ENSCLAG00000010801	-	86	63.116	Chinchilla_lanigera
ENSGACG00000005050	trmt1l	98	62.798	ENSCSAG00000012880	TRMT1L	84	62.957	Chlorocebus_sabaeus
ENSGACG00000005050	trmt1l	54	69.000	ENSCHOG00000011164	TRMT1L	56	69.000	Choloepus_hoffmanni
ENSGACG00000005050	trmt1l	99	64.945	ENSCPBG00000015694	TRMT1L	89	64.587	Chrysemys_picta_bellii
ENSGACG00000005050	trmt1l	98	63.434	ENSCANG00000031107	TRMT1L	84	63.434	Colobus_angolensis_palliatus
ENSGACG00000005050	trmt1l	100	61.062	ENSCGRG00001019297	Trmt1l	87	59.692	Cricetulus_griseus_chok1gshd
ENSGACG00000005050	trmt1l	100	61.062	ENSCGRG00000005036	Trmt1l	87	59.692	Cricetulus_griseus_crigri
ENSGACG00000005050	trmt1l	100	82.074	ENSCSEG00000001248	trmt1l	94	79.005	Cynoglossus_semilaevis
ENSGACG00000005050	trmt1l	97	85.533	ENSCVAG00000012274	trmt1l	94	81.377	Cyprinodon_variegatus
ENSGACG00000005050	trmt1l	99	79.049	ENSDARG00000042057	trmt1l	99	77.090	Danio_rerio
ENSGACG00000005050	trmt1l	97	63.370	ENSDNOG00000005239	TRMT1L	84	62.321	Dasypus_novemcinctus
ENSGACG00000005050	trmt1l	96	61.922	ENSDORG00000003298	Trmt1l	85	60.105	Dipodomys_ordii
ENSGACG00000005050	trmt1l	78	67.068	ENSETEG00000015895	TRMT1L	75	55.924	Echinops_telfairi
ENSGACG00000005050	trmt1l	97	47.407	ENSEBUG00000010301	trmt1l	93	45.920	Eptatretus_burgeri
ENSGACG00000005050	trmt1l	97	60.695	ENSEASG00005005551	TRMT1L	84	59.683	Equus_asinus_asinus
ENSGACG00000005050	trmt1l	97	63.370	ENSECAG00000020999	TRMT1L	79	62.003	Equus_caballus
ENSGACG00000005050	trmt1l	89	62.609	ENSEEUG00000014110	TRMT1L	81	64.865	Erinaceus_europaeus
ENSGACG00000005050	trmt1l	99	80.423	ENSELUG00000020587	trmt1l	90	79.721	Esox_lucius
ENSGACG00000005050	trmt1l	98	61.709	ENSFCAG00000011285	TRMT1L	85	62.102	Felis_catus
ENSGACG00000005050	trmt1l	98	63.455	ENSFALG00000003177	TRMT1L	95	63.016	Ficedula_albicollis
ENSGACG00000005050	trmt1l	100	62.167	ENSFDAG00000008822	TRMT1L	88	60.836	Fukomys_damarensis
ENSGACG00000005050	trmt1l	95	86.271	ENSFHEG00000014328	trmt1l	99	86.456	Fundulus_heteroclitus
ENSGACG00000005050	trmt1l	98	80.866	ENSGMOG00000009535	trmt1l	98	80.380	Gadus_morhua
ENSGACG00000005050	trmt1l	97	63.004	ENSGALG00000033077	TRMT1L	81	62.222	Gallus_gallus
ENSGACG00000005050	trmt1l	99	84.099	ENSGAFG00000012445	trmt1l	92	82.481	Gambusia_affinis
ENSGACG00000005050	trmt1l	99	65.102	ENSGAGG00000007441	TRMT1L	83	65.102	Gopherus_agassizii
ENSGACG00000005050	trmt1l	98	62.480	ENSGGOG00000011778	TRMT1L	85	62.639	Gorilla_gorilla
ENSGACG00000005050	trmt1l	99	86.726	ENSHBUG00000000622	trmt1l	99	82.884	Haplochromis_burtoni
ENSGACG00000005050	trmt1l	97	63.736	ENSHGLG00000003135	-	85	58.347	Heterocephalus_glaber_female
ENSGACG00000005050	trmt1l	96	55.000	ENSHGLG00000012595	-	89	50.237	Heterocephalus_glaber_female
ENSGACG00000005050	trmt1l	97	63.736	ENSHGLG00100019412	-	86	62.480	Heterocephalus_glaber_male
ENSGACG00000005050	trmt1l	96	55.000	ENSHGLG00100004569	-	89	50.237	Heterocephalus_glaber_male
ENSGACG00000005050	trmt1l	98	76.433	ENSIPUG00000008873	trmt1l	96	76.433	Ictalurus_punctatus
ENSGACG00000005050	trmt1l	98	62.321	ENSSTOG00000010332	TRMT1L	85	62.321	Ictidomys_tridecemlineatus
ENSGACG00000005050	trmt1l	100	60.746	ENSJJAG00000010929	Trmt1l	90	59.907	Jaculus_jaculus
ENSGACG00000005050	trmt1l	99	82.342	ENSKMAG00000010310	trmt1l	92	80.751	Kryptolebias_marmoratus
ENSGACG00000005050	trmt1l	99	86.096	ENSLBEG00000003487	trmt1l	91	84.351	Labrus_bergylta
ENSGACG00000005050	trmt1l	89	86.535	ENSLBEG00000007982	-	91	84.563	Labrus_bergylta
ENSGACG00000005050	trmt1l	99	66.608	ENSLACG00000008447	TRMT1L	94	65.533	Latimeria_chalumnae
ENSGACG00000005050	trmt1l	100	75.747	ENSLOCG00000001781	trmt1l	90	75.425	Lepisosteus_oculatus
ENSGACG00000005050	trmt1l	97	63.321	ENSLAFG00000004339	TRMT1L	85	62.381	Loxodonta_africana
ENSGACG00000005050	trmt1l	98	62.798	ENSMFAG00000037592	TRMT1L	84	62.957	Macaca_fascicularis
ENSGACG00000005050	trmt1l	98	62.957	ENSMMUG00000013879	TRMT1L	89	62.957	Macaca_mulatta
ENSGACG00000005050	trmt1l	98	62.798	ENSMNEG00000041637	TRMT1L	84	62.957	Macaca_nemestrina
ENSGACG00000005050	trmt1l	98	62.798	ENSMLEG00000004840	TRMT1L	84	62.957	Mandrillus_leucophaeus
ENSGACG00000005050	trmt1l	99	85.766	ENSMAMG00000015305	trmt1l	100	84.227	Mastacembelus_armatus
ENSGACG00000005050	trmt1l	99	87.080	ENSMZEG00005017822	trmt1l	92	84.914	Maylandia_zebra
ENSGACG00000005050	trmt1l	97	63.187	ENSMGAG00000000930	TRMT1L	94	62.758	Meleagris_gallopavo
ENSGACG00000005050	trmt1l	98	58.176	ENSMAUG00000019870	Trmt1l	86	58.176	Mesocricetus_auratus
ENSGACG00000005050	trmt1l	98	62.798	ENSMICG00000009494	TRMT1L	85	62.957	Microcebus_murinus
ENSGACG00000005050	trmt1l	97	61.792	ENSMOCG00000016453	Trmt1l	85	60.317	Microtus_ochrogaster
ENSGACG00000005050	trmt1l	97	85.219	ENSMMOG00000016961	trmt1l	97	83.227	Mola_mola
ENSGACG00000005050	trmt1l	98	66.000	ENSMODG00000007454	TRMT1L	72	65.135	Monodelphis_domestica
ENSGACG00000005050	trmt1l	100	86.067	ENSMALG00000019306	trmt1l	92	84.830	Monopterus_albus
ENSGACG00000005050	trmt1l	98	61.413	MGP_CAROLIEiJ_G0014693	Trmt1l	86	60.472	Mus_caroli
ENSGACG00000005050	trmt1l	98	61.413	ENSMUSG00000053286	Trmt1l	86	60.315	Mus_musculus
ENSGACG00000005050	trmt1l	98	60.539	MGP_PahariEiJ_G0027929	Trmt1l	85	60.539	Mus_pahari
ENSGACG00000005050	trmt1l	83	67.010	MGP_SPRETEiJ_G0015500	Trmt1l	83	67.010	Mus_spretus
ENSGACG00000005050	trmt1l	98	57.886	ENSMPUG00000011859	TRMT1L	85	59.048	Mustela_putorius_furo
ENSGACG00000005050	trmt1l	97	63.553	ENSMLUG00000001136	TRMT1L	86	62.798	Myotis_lucifugus
ENSGACG00000005050	trmt1l	98	61.102	ENSNGAG00000011685	Trmt1l	86	61.490	Nannospalax_galili
ENSGACG00000005050	trmt1l	77	84.848	ENSNBRG00000004053	trmt1l	94	87.179	Neolamprologus_brichardi
ENSGACG00000005050	trmt1l	98	63.116	ENSNLEG00000018030	TRMT1L	85	63.275	Nomascus_leucogenys
ENSGACG00000005050	trmt1l	85	67.273	ENSMEUG00000011344	TRMT1L	79	67.273	Notamacropus_eugenii
ENSGACG00000005050	trmt1l	98	61.343	ENSOPRG00000000680	TRMT1L	95	55.873	Ochotona_princeps
ENSGACG00000005050	trmt1l	98	59.459	ENSODEG00000000826	TRMT1L	86	59.459	Octodon_degus
ENSGACG00000005050	trmt1l	99	88.142	ENSONIG00000007823	trmt1l	100	87.081	Oreochromis_niloticus
ENSGACG00000005050	trmt1l	99	64.621	ENSOANG00000001010	TRMT1L	95	63.208	Ornithorhynchus_anatinus
ENSGACG00000005050	trmt1l	98	61.636	ENSOCUG00000004896	TRMT1L	87	61.709	Oryctolagus_cuniculus
ENSGACG00000005050	trmt1l	96	86.813	ENSORLG00000029610	trmt1l	99	85.784	Oryzias_latipes
ENSGACG00000005050	trmt1l	96	86.630	ENSORLG00020002203	trmt1l	93	83.771	Oryzias_latipes_hni
ENSGACG00000005050	trmt1l	96	86.264	ENSORLG00015021512	trmt1l	93	83.462	Oryzias_latipes_hsok
ENSGACG00000005050	trmt1l	94	80.566	ENSOMEG00000016275	trmt1l	87	81.698	Oryzias_melastigma
ENSGACG00000005050	trmt1l	98	57.143	ENSOGAG00000016186	TRMT1L	96	56.418	Otolemur_garnettii
ENSGACG00000005050	trmt1l	97	63.504	ENSOARG00000003786	TRMT1L	84	62.282	Ovis_aries
ENSGACG00000005050	trmt1l	98	62.321	ENSPPAG00000029141	TRMT1L	85	62.480	Pan_paniscus
ENSGACG00000005050	trmt1l	98	62.261	ENSPPRG00000023981	TRMT1L	85	62.261	Panthera_pardus
ENSGACG00000005050	trmt1l	98	62.261	ENSPTIG00000021754	TRMT1L	85	62.261	Panthera_tigris_altaica
ENSGACG00000005050	trmt1l	98	62.321	ENSPTRG00000001776	TRMT1L	85	62.480	Pan_troglodytes
ENSGACG00000005050	trmt1l	98	60.731	ENSPANG00000020890	TRMT1L	84	60.890	Papio_anubis
ENSGACG00000005050	trmt1l	99	78.173	ENSPKIG00000005941	trmt1l	90	78.173	Paramormyrops_kingsleyae
ENSGACG00000005050	trmt1l	99	64.006	ENSPSIG00000010011	TRMT1L	93	64.006	Pelodiscus_sinensis
ENSGACG00000005050	trmt1l	89	76.494	ENSPMGG00000021359	trmt1l	95	75.583	Periophthalmus_magnuspinnatus
ENSGACG00000005050	trmt1l	99	60.436	ENSPEMG00000000031	Trmt1l	86	61.014	Peromyscus_maniculatus_bairdii
ENSGACG00000005050	trmt1l	97	57.857	ENSPMAG00000005838	trmt1l	100	58.320	Petromyzon_marinus
ENSGACG00000005050	trmt1l	97	66.239	ENSPCIG00000002409	TRMT1L	83	65.710	Phascolarctos_cinereus
ENSGACG00000005050	trmt1l	99	84.821	ENSPFOG00000003872	trmt1l	99	82.791	Poecilia_formosa
ENSGACG00000005050	trmt1l	99	84.602	ENSPLAG00000010387	trmt1l	92	82.893	Poecilia_latipinna
ENSGACG00000005050	trmt1l	99	84.779	ENSPMEG00000011828	trmt1l	99	82.989	Poecilia_mexicana
ENSGACG00000005050	trmt1l	99	84.248	ENSPREG00000002866	trmt1l	92	82.453	Poecilia_reticulata
ENSGACG00000005050	trmt1l	98	62.480	ENSPPYG00000000416	TRMT1L	85	62.639	Pongo_abelii
ENSGACG00000005050	trmt1l	86	70.787	ENSPCAG00000008257	TRMT1L	74	70.787	Procavia_capensis
ENSGACG00000005050	trmt1l	82	55.689	ENSPCOG00000005682	TRMT1L	82	43.968	Propithecus_coquereli
ENSGACG00000005050	trmt1l	85	63.938	ENSPVAG00000005961	TRMT1L	73	64.732	Pteropus_vampyrus
ENSGACG00000005050	trmt1l	99	86.101	ENSPNYG00000005607	trmt1l	99	83.201	Pundamilia_nyererei
ENSGACG00000005050	trmt1l	98	80.216	ENSPNAG00000004389	trmt1l	88	79.528	Pygocentrus_nattereri
ENSGACG00000005050	trmt1l	97	61.722	ENSRNOG00000002580	Trmt1l	85	60.572	Rattus_norvegicus
ENSGACG00000005050	trmt1l	98	63.275	ENSRBIG00000042589	TRMT1L	84	63.275	Rhinopithecus_bieti
ENSGACG00000005050	trmt1l	98	63.275	ENSRROG00000032183	TRMT1L	84	63.275	Rhinopithecus_roxellana
ENSGACG00000005050	trmt1l	97	63.736	ENSSBOG00000029282	TRMT1L	85	63.275	Saimiri_boliviensis_boliviensis
ENSGACG00000005050	trmt1l	100	79.577	ENSSFOG00015004878	trmt1l	90	78.923	Scleropages_formosus
ENSGACG00000005050	trmt1l	68	84.783	ENSSMAG00000015425	trmt1l	99	80.332	Scophthalmus_maximus
ENSGACG00000005050	trmt1l	99	90.619	ENSSDUG00000021807	trmt1l	99	88.871	Seriola_dumerili
ENSGACG00000005050	trmt1l	99	90.088	ENSSLDG00000016579	trmt1l	99	88.553	Seriola_lalandi_dorsalis
ENSGACG00000005050	trmt1l	82	62.260	ENSSARG00000010135	TRMT1L	82	62.981	Sorex_araneus
ENSGACG00000005050	trmt1l	98	65.756	ENSSPUG00000003927	TRMT1L	97	66.164	Sphenodon_punctatus
ENSGACG00000005050	trmt1l	99	87.965	ENSSPAG00000008597	trmt1l	91	86.646	Stegastes_partitus
ENSGACG00000005050	trmt1l	97	63.486	ENSSSCG00000021393	TRMT1L	80	62.141	Sus_scrofa
ENSGACG00000005050	trmt1l	98	63.196	ENSTGUG00000003737	TRMT1L	93	62.696	Taeniopygia_guttata
ENSGACG00000005050	trmt1l	99	76.619	ENSTRUG00000002396	trmt1l	99	68.889	Takifugu_rubripes
ENSGACG00000005050	trmt1l	76	80.282	ENSTNIG00000005534	trmt1l	99	80.282	Tetraodon_nigroviridis
ENSGACG00000005050	trmt1l	82	62.874	ENSTBEG00000016498	TRMT1L	73	62.874	Tupaia_belangeri
ENSGACG00000005050	trmt1l	98	60.095	ENSTTRG00000005892	TRMT1L	85	60.254	Tursiops_truncatus
ENSGACG00000005050	trmt1l	97	62.637	ENSUAMG00000020936	TRMT1L	84	62.162	Ursus_americanus
ENSGACG00000005050	trmt1l	97	62.637	ENSUMAG00000021919	TRMT1L	83	62.162	Ursus_maritimus
ENSGACG00000005050	trmt1l	98	63.016	ENSVPAG00000011854	TRMT1L	94	63.419	Vicugna_pacos
ENSGACG00000005050	trmt1l	98	62.480	ENSVVUG00000009166	TRMT1L	84	62.639	Vulpes_vulpes
ENSGACG00000005050	trmt1l	78	56.917	ENSXETG00000004539	trmt1l	92	56.917	Xenopus_tropicalis
ENSGACG00000005050	trmt1l	99	81.769	ENSXCOG00000007372	trmt1l	92	81.697	Xiphophorus_couchianus
ENSGACG00000005050	trmt1l	99	84.276	ENSXMAG00000003575	trmt1l	99	80.854	Xiphophorus_maculatus