EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005242 (Gene tree)
Gene ID: -
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family-like 6b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 9365 bases
Position: chrgroupXIII:2974448-2983812
Accession: ZDB-GENE-081104-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000006940	MMR_HSR1	PF01926.23	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000006958	-	2217	-	ENSGACP00000006940	739 (aa)	-	G3NNM6

Gene Model

Click here to download ENSGACG00000005242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005242	rabl6b	100	74.633	ENSACIG00000010721	rabl6b	100	74.366	Amphilophus_citrinellus
ENSGACG00000005242	rabl6b	100	78.905	ENSATEG00000012055	rabl6b	100	78.905	Anabas_testudineus
ENSGACG00000005242	rabl6b	100	69.880	ENSCSEG00000012430	-	97	74.601	Cynoglossus_semilaevis
ENSGACG00000005242	rabl6b	100	74.113	ENSCSEG00000016135	rabl6b	100	74.770	Cynoglossus_semilaevis
ENSGACG00000005242	rabl6b	100	62.259	ENSELUG00000004448	rabl6b	90	74.771	Esox_lucius
ENSGACG00000005242	rabl6b	100	74.799	ENSGAFG00000013561	rabl6b	99	75.884	Gambusia_affinis
ENSGACG00000005242	rabl6b	100	81.467	ENSHBUG00000014235	rabl6b	100	80.400	Haplochromis_burtoni
ENSGACG00000005242	rabl6b	100	62.082	ENSIPUG00000019266	rabl6	100	62.468	Ictalurus_punctatus
ENSGACG00000005242	rabl6b	84	57.031	ENSLOCG00000001402	rabl6b	96	57.277	Lepisosteus_oculatus
ENSGACG00000005242	rabl6b	100	76.810	ENSMAMG00000019516	rabl6b	100	78.552	Mastacembelus_armatus
ENSGACG00000005242	rabl6b	64	73.109	ENSMZEG00005003942	rabl6b	99	73.529	Maylandia_zebra
ENSGACG00000005242	rabl6b	64	69.979	ENSMMOG00000009459	rabl6b	97	68.922	Mola_mola
ENSGACG00000005242	rabl6b	100	79.200	ENSMALG00000002029	rabl6b	100	81.333	Monopterus_albus
ENSGACG00000005242	rabl6b	64	72.746	ENSNBRG00000012512	rabl6b	99	71.908	Neolamprologus_brichardi
ENSGACG00000005242	rabl6b	100	79.759	ENSONIG00000010408	rabl6b	100	79.361	Oreochromis_niloticus
ENSGACG00000005242	rabl6b	100	75.299	ENSORLG00020017557	rabl6b	100	75.397	Oryzias_latipes_hni
ENSGACG00000005242	rabl6b	89	78.358	ENSORLG00015007848	rabl6b	92	78.209	Oryzias_latipes_hsok
ENSGACG00000005242	rabl6b	89	78.788	ENSOMEG00000022840	rabl6b	96	79.305	Oryzias_melastigma
ENSGACG00000005242	rabl6b	100	61.248	ENSPKIG00000007459	RABL6	100	61.061	Paramormyrops_kingsleyae
ENSGACG00000005242	rabl6b	91	58.402	ENSPCIG00000023722	RABL6	91	59.634	Phascolarctos_cinereus
ENSGACG00000005242	rabl6b	100	78.961	ENSPFOG00000003250	rabl6b	100	77.230	Poecilia_formosa
ENSGACG00000005242	rabl6b	100	78.961	ENSPLAG00000019562	rabl6b	100	77.097	Poecilia_latipinna
ENSGACG00000005242	rabl6b	100	79.122	ENSPMEG00000020472	rabl6b	100	77.261	Poecilia_mexicana
ENSGACG00000005242	rabl6b	89	80.179	ENSPREG00000014116	rabl6b	94	80.179	Poecilia_reticulata
ENSGACG00000005242	rabl6b	89	64.183	ENSPNAG00000010857	rabl6b	100	60.956	Pygocentrus_nattereri
ENSGACG00000005242	rabl6b	99	63.012	ENSSFOG00015013414	-	99	63.089	Scleropages_formosus
ENSGACG00000005242	rabl6b	100	62.698	ENSSFOG00015017388	RABL6	100	62.051	Scleropages_formosus
ENSGACG00000005242	rabl6b	88	81.024	ENSSMAG00000012543	rabl6b	96	81.493	Scophthalmus_maximus
ENSGACG00000005242	rabl6b	100	81.275	ENSSDUG00000006564	rabl6b	100	81.275	Seriola_dumerili
ENSGACG00000005242	rabl6b	100	80.214	ENSSPAG00000021033	rabl6b	100	80.481	Stegastes_partitus
ENSGACG00000005242	rabl6b	99	72.727	ENSTNIG00000010595	rabl6b	100	72.596	Tetraodon_nigroviridis