EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 13743 bases
Position: chrgroupVIII:4511430-4525172
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007024	zf-CCHC	PF00098.23	2.1e-09	1	2
ENSGACP00000007024	zf-CCHC	PF00098.23	2.1e-09	2	2
ENSGACP00000007024	PAP_assoc	PF03828.19	8.5e-28	1	2
ENSGACP00000007024	PAP_assoc	PF03828.19	8.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007042	-	4567	-	ENSGACP00000007024	1324 (aa)	-	G3NNW0

Gene Model

Click here to download ENSGACG00000005282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005282's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005282	-	65	66.826	ENSGACG00000004735	TUT7	80	66.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005282	-	91	61.364	ENSG00000134744	TUT4	99	58.065	Homo_sapiens
ENSGACG00000005282	-	98	56.348	ENSAMEG00000009340	TUT4	73	61.587	Ailuropoda_melanoleuca
ENSGACG00000005282	-	72	80.030	ENSACIG00000018199	TUT4	95	81.053	Amphilophus_citrinellus
ENSGACG00000005282	-	62	66.508	ENSACIG00000018887	-	62	66.508	Amphilophus_citrinellus
ENSGACG00000005282	-	98	81.430	ENSAOCG00000007862	TUT4	86	81.430	Amphiprion_ocellaris
ENSGACG00000005282	-	98	81.430	ENSAPEG00000019857	TUT4	89	79.611	Amphiprion_percula
ENSGACG00000005282	-	64	61.458	ENSATEG00000022516	-	93	54.839	Anabas_testudineus
ENSGACG00000005282	-	98	81.339	ENSATEG00000003823	TUT4	86	80.967	Anabas_testudineus
ENSGACG00000005282	-	90	68.043	ENSAPLG00000006345	TUT4	75	67.507	Anas_platyrhynchos
ENSGACG00000005282	-	93	63.683	ENSACAG00000008282	TUT4	76	64.798	Anolis_carolinensis
ENSGACG00000005282	-	92	60.722	ENSANAG00000013486	TUT4	68	80.296	Aotus_nancymaae
ENSGACG00000005282	-	98	78.772	ENSACLG00000023312	TUT4	89	78.682	Astatotilapia_calliptera
ENSGACG00000005282	-	56	71.316	ENSAMXG00000007030	TUT4	87	66.766	Astyanax_mexicanus
ENSGACG00000005282	-	90	62.354	ENSBTAG00000002721	TUT4	72	61.886	Bos_taurus
ENSGACG00000005282	-	95	60.497	ENSCJAG00000021588	TUT4	74	60.945	Callithrix_jacchus
ENSGACG00000005282	-	98	62.179	ENSCAFG00000003734	TUT4	74	61.258	Canis_familiaris
ENSGACG00000005282	-	70	65.557	ENSCAFG00020010923	-	99	63.275	Canis_lupus_dingo
ENSGACG00000005282	-	95	60.497	ENSCHIG00000023944	TUT4	71	61.460	Capra_hircus
ENSGACG00000005282	-	90	62.240	ENSTSYG00000009885	TUT4	73	61.062	Carlito_syrichta
ENSGACG00000005282	-	90	56.394	ENSCAPG00000005680	TUT4	74	57.088	Cavia_aperea
ENSGACG00000005282	-	92	61.175	ENSCPOG00000005086	TUT4	74	61.675	Cavia_porcellus
ENSGACG00000005282	-	81	71.480	ENSCCAG00000036903	TUT4	68	80.049	Cebus_capucinus
ENSGACG00000005282	-	70	56.320	ENSCCAG00000025142	-	94	48.775	Cebus_capucinus
ENSGACG00000005282	-	91	61.490	ENSCATG00000024618	TUT4	58	81.772	Cercocebus_atys
ENSGACG00000005282	-	91	63.672	ENSCLAG00000005255	TUT4	73	62.003	Chinchilla_lanigera
ENSGACG00000005282	-	91	61.490	ENSCSAG00000001277	TUT4	73	61.587	Chlorocebus_sabaeus
ENSGACG00000005282	-	78	73.116	ENSCHOG00000010995	TUT4	62	73.815	Choloepus_hoffmanni
ENSGACG00000005282	-	90	67.191	ENSCPBG00000014796	TUT4	72	80.242	Chrysemys_picta_bellii
ENSGACG00000005282	-	91	61.104	ENSCANG00000036212	TUT4	63	81.772	Colobus_angolensis_palliatus
ENSGACG00000005282	-	94	61.844	ENSCGRG00001020315	-	72	62.644	Cricetulus_griseus_chok1gshd
ENSGACG00000005282	-	94	61.844	ENSCGRG00000017571	Tut4	72	62.644	Cricetulus_griseus_crigri
ENSGACG00000005282	-	71	79.817	ENSCSEG00000002476	TUT4	96	80.153	Cynoglossus_semilaevis
ENSGACG00000005282	-	98	75.300	ENSCVAG00000012659	TUT4	87	75.169	Cyprinodon_variegatus
ENSGACG00000005282	-	72	69.347	ENSDARG00000101404	CABZ01065131.1	96	68.892	Danio_rerio
ENSGACG00000005282	-	93	61.441	ENSDNOG00000013920	TUT4	73	61.335	Dasypus_novemcinctus
ENSGACG00000005282	-	98	56.200	ENSDORG00000027891	Tut4	82	54.598	Dipodomys_ordii
ENSGACG00000005282	-	69	67.134	ENSETEG00000016298	TUT4	57	67.134	Echinops_telfairi
ENSGACG00000005282	-	77	47.741	ENSEBUG00000009834	TUT4	86	47.554	Eptatretus_burgeri
ENSGACG00000005282	-	98	55.348	ENSECAG00000021261	TUT4	72	61.209	Equus_caballus
ENSGACG00000005282	-	92	59.924	ENSEEUG00000003834	TUT4	68	60.175	Erinaceus_europaeus
ENSGACG00000005282	-	98	70.894	ENSELUG00000024167	TUT4	87	71.544	Esox_lucius
ENSGACG00000005282	-	98	60.722	ENSFCAG00000003246	TUT4	73	61.209	Felis_catus
ENSGACG00000005282	-	91	66.494	ENSFALG00000005607	TUT4	74	66.450	Ficedula_albicollis
ENSGACG00000005282	-	98	58.824	ENSFDAG00000016676	TUT4	73	61.529	Fukomys_damarensis
ENSGACG00000005282	-	72	78.045	ENSFHEG00000002296	-	99	78.045	Fundulus_heteroclitus
ENSGACG00000005282	-	99	71.029	ENSGMOG00000001281	TUT4	100	71.558	Gadus_morhua
ENSGACG00000005282	-	92	67.068	ENSGALG00000010629	TUT4	77	67.020	Gallus_gallus
ENSGACG00000005282	-	72	78.045	ENSGAFG00000011427	-	98	78.045	Gambusia_affinis
ENSGACG00000005282	-	92	76.667	ENSGAGG00000020531	TUT4	75	63.055	Gopherus_agassizii
ENSGACG00000005282	-	68	81.875	ENSHBUG00000008564	-	100	82.656	Haplochromis_burtoni
ENSGACG00000005282	-	97	63.613	ENSHGLG00000000804	TUT4	73	61.529	Heterocephalus_glaber_female
ENSGACG00000005282	-	97	63.613	ENSHGLG00100002051	TUT4	73	61.529	Heterocephalus_glaber_male
ENSGACG00000005282	-	75	74.149	ENSHCOG00000009746	-	97	76.408	Hippocampus_comes
ENSGACG00000005282	-	98	65.341	ENSIPUG00000002638	zcchc11	86	65.315	Ictalurus_punctatus
ENSGACG00000005282	-	98	55.699	ENSSTOG00000015611	TUT4	72	61.911	Ictidomys_tridecemlineatus
ENSGACG00000005282	-	72	79.970	ENSKMAG00000017970	TUT4	96	79.970	Kryptolebias_marmoratus
ENSGACG00000005282	-	98	81.227	ENSLBEG00000006518	TUT4	87	81.077	Labrus_bergylta
ENSGACG00000005282	-	90	68.233	ENSLACG00000010748	TUT4	71	66.379	Latimeria_chalumnae
ENSGACG00000005282	-	97	70.656	ENSLOCG00000006248	TUT4	88	70.262	Lepisosteus_oculatus
ENSGACG00000005282	-	97	63.007	ENSLAFG00000003763	TUT4	69	73.148	Loxodonta_africana
ENSGACG00000005282	-	91	61.490	ENSMFAG00000011842	TUT4	74	61.587	Macaca_fascicularis
ENSGACG00000005282	-	86	63.762	ENSMMUG00000017023	TUT4	64	81.772	Macaca_mulatta
ENSGACG00000005282	-	91	61.104	ENSMNEG00000009839	TUT4	76	61.202	Macaca_nemestrina
ENSGACG00000005282	-	91	61.490	ENSMLEG00000036158	TUT4	61	81.772	Mandrillus_leucophaeus
ENSGACG00000005282	-	98	79.247	ENSMAMG00000014890	TUT4	87	78.873	Mastacembelus_armatus
ENSGACG00000005282	-	98	78.772	ENSMZEG00005017227	TUT4	87	78.682	Maylandia_zebra
ENSGACG00000005282	-	91	67.957	ENSMGAG00000011185	TUT4	90	67.553	Meleagris_gallopavo
ENSGACG00000005282	-	62	73.239	ENSMAUG00000010283	Tut4	58	73.239	Mesocricetus_auratus
ENSGACG00000005282	-	91	61.616	ENSMICG00000015853	TUT4	72	61.791	Microcebus_murinus
ENSGACG00000005282	-	64	73.239	ENSMOCG00000012851	Tut4	60	73.239	Microtus_ochrogaster
ENSGACG00000005282	-	64	61.111	ENSMMOG00000017546	-	71	61.111	Mola_mola
ENSGACG00000005282	-	71	80.861	ENSMMOG00000016870	-	94	80.861	Mola_mola
ENSGACG00000005282	-	92	65.252	ENSMODG00000000618	TUT4	76	65.786	Monodelphis_domestica
ENSGACG00000005282	-	72	79.398	ENSMALG00000014488	-	96	79.398	Monopterus_albus
ENSGACG00000005282	-	98	54.960	MGP_CAROLIEiJ_G0026268	Tut4	73	62.516	Mus_caroli
ENSGACG00000005282	-	93	62.047	ENSMUSG00000034610	Tut4	73	62.516	Mus_musculus
ENSGACG00000005282	-	93	61.917	MGP_PahariEiJ_G0028601	Tut4	73	62.388	Mus_pahari
ENSGACG00000005282	-	93	61.788	MGP_SPRETEiJ_G0027237	Tut4	73	62.259	Mus_spretus
ENSGACG00000005282	-	98	55.252	ENSMPUG00000006880	TUT4	72	60.837	Mustela_putorius_furo
ENSGACG00000005282	-	91	62.581	ENSMLUG00000001067	TUT4	71	61.697	Myotis_lucifugus
ENSGACG00000005282	-	64	72.535	ENSNGAG00000011508	Tut4	60	72.535	Nannospalax_galili
ENSGACG00000005282	-	72	83.489	ENSNBRG00000005683	-	96	83.489	Neolamprologus_brichardi
ENSGACG00000005282	-	91	62.069	ENSNLEG00000017998	TUT4	62	81.772	Nomascus_leucogenys
ENSGACG00000005282	-	86	64.583	ENSMEUG00000003865	TUT4	68	64.583	Notamacropus_eugenii
ENSGACG00000005282	-	90	52.370	ENSOPRG00000016362	TUT4	73	52.370	Ochotona_princeps
ENSGACG00000005282	-	91	62.353	ENSODEG00000007328	TUT4	73	61.421	Octodon_degus
ENSGACG00000005282	-	98	78.862	ENSONIG00000019455	TUT4	98	79.561	Oreochromis_niloticus
ENSGACG00000005282	-	91	57.028	ENSOANG00000012864	TUT4	74	63.549	Ornithorhynchus_anatinus
ENSGACG00000005282	-	91	60.969	ENSOCUG00000002390	TUT4	74	61.274	Oryctolagus_cuniculus
ENSGACG00000005282	-	72	77.812	ENSORLG00000013135	-	95	77.812	Oryzias_latipes
ENSGACG00000005282	-	72	77.969	ENSORLG00020002631	-	95	77.969	Oryzias_latipes_hni
ENSGACG00000005282	-	72	78.594	ENSORLG00015001219	-	95	78.594	Oryzias_latipes_hsok
ENSGACG00000005282	-	71	77.812	ENSOMEG00000015574	-	96	77.812	Oryzias_melastigma
ENSGACG00000005282	-	90	61.349	ENSOGAG00000005425	TUT4	73	60.354	Otolemur_garnettii
ENSGACG00000005282	-	98	58.901	ENSOARG00000005494	TUT4	72	62.100	Ovis_aries
ENSGACG00000005282	-	91	61.104	ENSPPAG00000037653	TUT4	61	81.772	Pan_paniscus
ENSGACG00000005282	-	98	60.497	ENSPPRG00000020521	TUT4	73	61.587	Panthera_pardus
ENSGACG00000005282	-	98	60.497	ENSPTIG00000010511	TUT4	73	61.587	Panthera_tigris_altaica
ENSGACG00000005282	-	91	61.490	ENSPTRG00000000740	TUT4	61	81.772	Pan_troglodytes
ENSGACG00000005282	-	91	60.271	ENSPANG00000005042	TUT4	74	60.271	Papio_anubis
ENSGACG00000005282	-	73	70.544	ENSPKIG00000004670	TUT4	91	70.695	Paramormyrops_kingsleyae
ENSGACG00000005282	-	95	64.824	ENSPSIG00000016704	TUT4	79	64.447	Pelodiscus_sinensis
ENSGACG00000005282	-	62	73.239	ENSPEMG00000023722	Tut4	58	73.239	Peromyscus_maniculatus_bairdii
ENSGACG00000005282	-	97	58.026	ENSPCIG00000022380	TUT4	77	63.223	Phascolarctos_cinereus
ENSGACG00000005282	-	97	76.702	ENSPFOG00000002439	TUT4	91	76.954	Poecilia_formosa
ENSGACG00000005282	-	72	77.744	ENSPLAG00000008701	-	98	77.744	Poecilia_latipinna
ENSGACG00000005282	-	72	77.410	ENSPMEG00000006996	-	98	77.410	Poecilia_mexicana
ENSGACG00000005282	-	91	61.753	ENSPPYG00000001347	TUT4	73	61.499	Pongo_abelii
ENSGACG00000005282	-	85	88.649	ENSPCAG00000013380	TUT4	81	67.293	Procavia_capensis
ENSGACG00000005282	-	91	60.497	ENSPCOG00000007824	TUT4	72	60.497	Propithecus_coquereli
ENSGACG00000005282	-	98	51.096	ENSPVAG00000009804	TUT4	72	57.396	Pteropus_vampyrus
ENSGACG00000005282	-	98	78.608	ENSPNYG00000023175	TUT4	87	78.682	Pundamilia_nyererei
ENSGACG00000005282	-	56	71.656	ENSPNAG00000022786	TUT4	88	65.852	Pygocentrus_nattereri
ENSGACG00000005282	-	90	64.646	ENSRNOG00000052062	Tut4	67	64.646	Rattus_norvegicus
ENSGACG00000005282	-	91	58.691	ENSRBIG00000027989	TUT4	73	58.691	Rhinopithecus_bieti
ENSGACG00000005282	-	98	61.364	ENSRROG00000034868	TUT4	86	61.461	Rhinopithecus_roxellana
ENSGACG00000005282	-	98	59.069	ENSSBOG00000013661	TUT4	77	60.945	Saimiri_boliviensis_boliviensis
ENSGACG00000005282	-	76	52.596	ENSSBOG00000020099	-	98	48.775	Saimiri_boliviensis_boliviensis
ENSGACG00000005282	-	96	63.147	ENSSHAG00000006231	TUT4	77	64.089	Sarcophilus_harrisii
ENSGACG00000005282	-	97	67.902	ENSSFOG00015013524	zcchc11	86	69.151	Scleropages_formosus
ENSGACG00000005282	-	98	79.226	ENSSMAG00000016072	TUT4	87	79.390	Scophthalmus_maximus
ENSGACG00000005282	-	72	84.835	ENSSDUG00000021923	TUT4	96	84.835	Seriola_dumerili
ENSGACG00000005282	-	98	80.840	ENSSLDG00000016071	TUT4	87	81.135	Seriola_lalandi_dorsalis
ENSGACG00000005282	-	86	67.368	ENSSARG00000009798	TUT4	66	67.368	Sorex_araneus
ENSGACG00000005282	-	91	64.719	ENSSPUG00000013287	TUT4	78	64.719	Sphenodon_punctatus
ENSGACG00000005282	-	72	77.744	ENSSPAG00000008141	-	96	77.744	Stegastes_partitus
ENSGACG00000005282	-	90	67.368	ENSSSCG00000003859	TUT4	60	80.926	Sus_scrofa
ENSGACG00000005282	-	92	68.043	ENSTGUG00000009011	TUT4	77	67.639	Taeniopygia_guttata
ENSGACG00000005282	-	70	73.546	ENSTNIG00000002785	-	100	73.269	Tetraodon_nigroviridis
ENSGACG00000005282	-	91	61.188	ENSTTRG00000016142	TUT4	73	61.209	Tursiops_truncatus
ENSGACG00000005282	-	98	56.403	ENSUAMG00000000759	TUT4	82	76.906	Ursus_americanus
ENSGACG00000005282	-	98	55.444	ENSUMAG00000022669	TUT4	72	60.837	Ursus_maritimus
ENSGACG00000005282	-	91	57.576	ENSVPAG00000000910	TUT4	73	57.775	Vicugna_pacos
ENSGACG00000005282	-	97	63.672	ENSVVUG00000002703	TUT4	97	58.879	Vulpes_vulpes
ENSGACG00000005282	-	98	56.998	ENSXETG00000008061	tut4	87	62.419	Xenopus_tropicalis
ENSGACG00000005282	-	72	77.677	ENSXCOG00000007204	-	98	77.677	Xiphophorus_couchianus
ENSGACG00000005282	-	72	77.979	ENSXMAG00000000751	-	98	77.979	Xiphophorus_maculatus