EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005423 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3681 bases
Position: chrgroupVIII:4848948-4852628
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007176	PRP38	PF03371.15	1.5e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007194	-	1356	-	ENSGACP00000007176	310 (aa)	-	G3NPB2

Gene Model

Click here to download ENSGACG00000005423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005423	prpf38a	55	98.824	ENSGACG00000000182	-	100	98.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005423	prpf38a	100	79.365	ENSG00000134748	PRPF38A	71	86.099	Homo_sapiens
ENSGACG00000005423	prpf38a	100	95.498	ENSAPOG00000011652	prpf38a	72	95.067	Acanthochromis_polyacanthus
ENSGACG00000005423	prpf38a	100	79.365	ENSAMEG00000009319	PRPF38A	71	86.099	Ailuropoda_melanoleuca
ENSGACG00000005423	prpf38a	72	90.583	ENSACIG00000012292	prpf38a	72	90.583	Amphilophus_citrinellus
ENSGACG00000005423	prpf38a	100	95.498	ENSAOCG00000018004	prpf38a	72	95.067	Amphiprion_ocellaris
ENSGACG00000005423	prpf38a	100	95.498	ENSAPEG00000021414	prpf38a	72	95.067	Amphiprion_percula
ENSGACG00000005423	prpf38a	72	92.377	ENSATEG00000004608	prpf38a	72	92.377	Anabas_testudineus
ENSGACG00000005423	prpf38a	79	76.000	ENSAPLG00000005827	PRPF38A	63	83.544	Anas_platyrhynchos
ENSGACG00000005423	prpf38a	100	79.683	ENSACAG00000008249	PRPF38A	71	86.099	Anolis_carolinensis
ENSGACG00000005423	prpf38a	100	79.365	ENSANAG00000027839	PRPF38A	71	86.099	Aotus_nancymaae
ENSGACG00000005423	prpf38a	100	58.544	ENSANAG00000029204	-	70	54.425	Aotus_nancymaae
ENSGACG00000005423	prpf38a	100	94.534	ENSACLG00000021595	prpf38a	74	93.722	Astatotilapia_calliptera
ENSGACG00000005423	prpf38a	100	82.540	ENSAMXG00000029274	prpf38a	71	91.480	Astyanax_mexicanus
ENSGACG00000005423	prpf38a	100	79.365	ENSBTAG00000002720	PRPF38A	75	86.099	Bos_taurus
ENSGACG00000005423	prpf38a	63	63.077	WBGene00008380	prp-38	70	60.538	Caenorhabditis_elegans
ENSGACG00000005423	prpf38a	100	79.365	ENSCJAG00000021594	PRPF38A	74	86.099	Callithrix_jacchus
ENSGACG00000005423	prpf38a	100	79.365	ENSCAFG00000003740	PRPF38A	71	86.099	Canis_familiaris
ENSGACG00000005423	prpf38a	100	79.365	ENSCAFG00020010939	PRPF38A	71	86.099	Canis_lupus_dingo
ENSGACG00000005423	prpf38a	100	79.365	ENSCHIG00000024730	PRPF38A	71	86.099	Capra_hircus
ENSGACG00000005423	prpf38a	86	75.735	ENSTSYG00000031994	-	63	82.222	Carlito_syrichta
ENSGACG00000005423	prpf38a	100	79.365	ENSTSYG00000009868	-	71	86.099	Carlito_syrichta
ENSGACG00000005423	prpf38a	100	81.470	ENSCPOG00000005079	PRPF38A	71	86.099	Cavia_porcellus
ENSGACG00000005423	prpf38a	75	85.408	ENSCCAG00000026502	PRPF38A	71	86.099	Cebus_capucinus
ENSGACG00000005423	prpf38a	100	79.365	ENSCATG00000032296	PRPF38A	71	86.099	Cercocebus_atys
ENSGACG00000005423	prpf38a	93	53.103	ENSCATG00000044190	-	57	55.080	Cercocebus_atys
ENSGACG00000005423	prpf38a	100	79.365	ENSCLAG00000005816	PRPF38A	71	86.099	Chinchilla_lanigera
ENSGACG00000005423	prpf38a	100	79.683	ENSCPBG00000014791	PRPF38A	71	86.099	Chrysemys_picta_bellii
ENSGACG00000005423	prpf38a	75	67.811	ENSCSAVG00000009580	-	71	69.863	Ciona_savignyi
ENSGACG00000005423	prpf38a	75	85.408	ENSCANG00000032608	PRPF38A	74	86.099	Colobus_angolensis_palliatus
ENSGACG00000005423	prpf38a	100	79.683	ENSCGRG00001018502	-	71	86.099	Cricetulus_griseus_chok1gshd
ENSGACG00000005423	prpf38a	85	69.582	ENSCGRG00001002557	-	74	72.646	Cricetulus_griseus_chok1gshd
ENSGACG00000005423	prpf38a	100	79.683	ENSCGRG00000014868	Prpf38a	71	86.099	Cricetulus_griseus_crigri
ENSGACG00000005423	prpf38a	72	91.031	ENSCSEG00000001269	prpf38a	76	91.031	Cynoglossus_semilaevis
ENSGACG00000005423	prpf38a	100	94.212	ENSCVAG00000012305	prpf38a	72	92.825	Cyprinodon_variegatus
ENSGACG00000005423	prpf38a	100	81.587	ENSDARG00000039213	prpf38a	71	90.583	Danio_rerio
ENSGACG00000005423	prpf38a	100	79.365	ENSDNOG00000042326	PRPF38A	72	86.099	Dasypus_novemcinctus
ENSGACG00000005423	prpf38a	85	72.453	ENSDORG00000023691	-	75	78.733	Dipodomys_ordii
ENSGACG00000005423	prpf38a	85	72.453	ENSDORG00000025371	-	75	78.733	Dipodomys_ordii
ENSGACG00000005423	prpf38a	89	88.073	ENSDORG00000023857	-	95	85.088	Dipodomys_ordii
ENSGACG00000005423	prpf38a	65	71.144	FBgn0050342	Prp38	57	72.872	Drosophila_melanogaster
ENSGACG00000005423	prpf38a	77	79.498	ENSEBUG00000012588	prpf38a	71	79.372	Eptatretus_burgeri
ENSGACG00000005423	prpf38a	100	79.365	ENSEASG00005014427	PRPF38A	71	86.099	Equus_asinus_asinus
ENSGACG00000005423	prpf38a	100	79.365	ENSECAG00000022628	PRPF38A	71	86.099	Equus_caballus
ENSGACG00000005423	prpf38a	72	91.480	ENSELUG00000021094	prpf38a	75	91.480	Esox_lucius
ENSGACG00000005423	prpf38a	100	79.365	ENSFCAG00000002518	PRPF38A	71	86.099	Felis_catus
ENSGACG00000005423	prpf38a	99	75.321	ENSFALG00000003612	-	73	82.273	Ficedula_albicollis
ENSGACG00000005423	prpf38a	87	77.737	ENSFALG00000005598	-	66	84.615	Ficedula_albicollis
ENSGACG00000005423	prpf38a	100	81.150	ENSFDAG00000011287	PRPF38A	72	86.099	Fukomys_damarensis
ENSGACG00000005423	prpf38a	90	82.517	ENSFHEG00000014317	prpf38a	75	92.377	Fundulus_heteroclitus
ENSGACG00000005423	prpf38a	54	95.783	ENSGMOG00000011384	prpf38a	54	95.783	Gadus_morhua
ENSGACG00000005423	prpf38a	100	80.635	ENSGALG00000010627	PRPF38A	71	87.444	Gallus_gallus
ENSGACG00000005423	prpf38a	100	94.534	ENSGAFG00000012422	prpf38a	100	94.534	Gambusia_affinis
ENSGACG00000005423	prpf38a	100	79.683	ENSGAGG00000020547	PRPF38A	71	86.547	Gopherus_agassizii
ENSGACG00000005423	prpf38a	100	79.365	ENSGGOG00000003940	PRPF38A	71	86.099	Gorilla_gorilla
ENSGACG00000005423	prpf38a	61	95.767	ENSHBUG00000020572	prpf38a	80	95.745	Haplochromis_burtoni
ENSGACG00000005423	prpf38a	100	71.246	ENSHGLG00000007918	-	71	74.439	Heterocephalus_glaber_female
ENSGACG00000005423	prpf38a	100	79.365	ENSHGLG00000000475	PRPF38A	71	86.099	Heterocephalus_glaber_female
ENSGACG00000005423	prpf38a	100	71.246	ENSHGLG00100003928	-	71	74.439	Heterocephalus_glaber_male
ENSGACG00000005423	prpf38a	100	79.365	ENSHGLG00100008935	PRPF38A	71	86.099	Heterocephalus_glaber_male
ENSGACG00000005423	prpf38a	58	93.407	ENSHCOG00000020781	prpf38a	59	93.617	Hippocampus_comes
ENSGACG00000005423	prpf38a	90	77.778	ENSIPUG00000005757	prpf38a	71	87.946	Ictalurus_punctatus
ENSGACG00000005423	prpf38a	100	79.365	ENSSTOG00000015610	PRPF38A	71	86.099	Ictidomys_tridecemlineatus
ENSGACG00000005423	prpf38a	100	79.048	ENSJJAG00000015811	Prpf38a	71	85.202	Jaculus_jaculus
ENSGACG00000005423	prpf38a	72	92.825	ENSKMAG00000006588	prpf38a	72	92.825	Kryptolebias_marmoratus
ENSGACG00000005423	prpf38a	100	93.891	ENSLBEG00000020585	prpf38a	72	93.722	Labrus_bergylta
ENSGACG00000005423	prpf38a	100	80.317	ENSLACG00000011495	PRPF38A	71	86.099	Latimeria_chalumnae
ENSGACG00000005423	prpf38a	100	90.385	ENSLOCG00000006262	prpf38a	72	87.500	Lepisosteus_oculatus
ENSGACG00000005423	prpf38a	100	79.365	ENSLAFG00000025862	PRPF38A	71	86.099	Loxodonta_africana
ENSGACG00000005423	prpf38a	100	79.365	ENSMFAG00000039449	PRPF38A	74	86.099	Macaca_fascicularis
ENSGACG00000005423	prpf38a	87	76.642	ENSMMUG00000014333	PRPF38A	65	82.514	Macaca_mulatta
ENSGACG00000005423	prpf38a	100	79.365	ENSMNEG00000031221	PRPF38A	71	86.099	Macaca_nemestrina
ENSGACG00000005423	prpf38a	93	52.414	ENSMNEG00000040242	-	65	56.796	Macaca_nemestrina
ENSGACG00000005423	prpf38a	100	79.365	ENSMLEG00000041105	PRPF38A	71	86.099	Mandrillus_leucophaeus
ENSGACG00000005423	prpf38a	72	94.619	ENSMAMG00000015431	prpf38a	74	94.619	Mastacembelus_armatus
ENSGACG00000005423	prpf38a	100	94.534	ENSMZEG00005017838	prpf38a	72	93.722	Maylandia_zebra
ENSGACG00000005423	prpf38a	75	86.695	ENSMGAG00000011176	PRPF38A	74	87.444	Meleagris_gallopavo
ENSGACG00000005423	prpf38a	85	80.827	ENSMAUG00000018029	-	84	81.614	Mesocricetus_auratus
ENSGACG00000005423	prpf38a	100	79.365	ENSMICG00000014193	PRPF38A	71	86.099	Microcebus_murinus
ENSGACG00000005423	prpf38a	100	79.683	ENSMOCG00000013080	Prpf38a	71	86.099	Microtus_ochrogaster
ENSGACG00000005423	prpf38a	83	88.760	ENSMMOG00000016972	prpf38a	78	94.170	Mola_mola
ENSGACG00000005423	prpf38a	100	77.215	ENSMODG00000000644	PRPF38A	71	82.589	Monodelphis_domestica
ENSGACG00000005423	prpf38a	72	94.619	ENSMALG00000019363	prpf38a	69	94.619	Monopterus_albus
ENSGACG00000005423	prpf38a	100	79.048	MGP_CAROLIEiJ_G0026269	Prpf38a	71	85.650	Mus_caroli
ENSGACG00000005423	prpf38a	100	79.048	ENSMUSG00000063800	Prpf38a	71	85.650	Mus_musculus
ENSGACG00000005423	prpf38a	100	79.048	MGP_PahariEiJ_G0028602	Prpf38a	71	85.650	Mus_pahari
ENSGACG00000005423	prpf38a	100	78.730	MGP_SPRETEiJ_G0027238	Prpf38a	93	89.894	Mus_spretus
ENSGACG00000005423	prpf38a	100	79.365	ENSMPUG00000006896	PRPF38A	71	86.099	Mustela_putorius_furo
ENSGACG00000005423	prpf38a	100	81.789	ENSNGAG00000011884	Prpf38a	72	86.099	Nannospalax_galili
ENSGACG00000005423	prpf38a	72	92.377	ENSNBRG00000004013	prpf38a	71	92.377	Neolamprologus_brichardi
ENSGACG00000005423	prpf38a	93	78.425	ENSNLEG00000017999	PRPF38A	63	85.000	Nomascus_leucogenys
ENSGACG00000005423	prpf38a	97	62.295	ENSNLEG00000012592	-	97	60.606	Nomascus_leucogenys
ENSGACG00000005423	prpf38a	93	55.822	ENSNLEG00000033398	-	59	50.463	Nomascus_leucogenys
ENSGACG00000005423	prpf38a	100	77.143	ENSMEUG00000003860	PRPF38A	71	82.511	Notamacropus_eugenii
ENSGACG00000005423	prpf38a	74	85.652	ENSOPRG00000008985	PRPF38A	92	86.099	Ochotona_princeps
ENSGACG00000005423	prpf38a	100	79.365	ENSODEG00000005869	PRPF38A	71	86.099	Octodon_degus
ENSGACG00000005423	prpf38a	100	93.569	ENSONIG00000007816	prpf38a	72	92.377	Oreochromis_niloticus
ENSGACG00000005423	prpf38a	100	50.158	ENSOANG00000009541	-	80	47.059	Ornithorhynchus_anatinus
ENSGACG00000005423	prpf38a	100	79.365	ENSOCUG00000000963	PRPF38A	71	86.099	Oryctolagus_cuniculus
ENSGACG00000005423	prpf38a	100	93.569	ENSORLG00000013485	prpf38a	79	92.825	Oryzias_latipes
ENSGACG00000005423	prpf38a	100	93.569	ENSORLG00020002130	prpf38a	79	92.825	Oryzias_latipes_hni
ENSGACG00000005423	prpf38a	100	93.248	ENSORLG00015021393	prpf38a	75	92.377	Oryzias_latipes_hsok
ENSGACG00000005423	prpf38a	100	93.891	ENSOMEG00000016333	prpf38a	100	93.891	Oryzias_melastigma
ENSGACG00000005423	prpf38a	100	79.365	ENSOGAG00000005423	PRPF38A	71	86.099	Otolemur_garnettii
ENSGACG00000005423	prpf38a	100	79.365	ENSOARG00000005373	PRPF38A	71	86.099	Ovis_aries
ENSGACG00000005423	prpf38a	100	79.365	ENSPPAG00000030905	PRPF38A	71	86.099	Pan_paniscus
ENSGACG00000005423	prpf38a	93	67.123	ENSPPAG00000033867	-	65	69.048	Pan_paniscus
ENSGACG00000005423	prpf38a	100	79.365	ENSPPRG00000013268	PRPF38A	71	86.099	Panthera_pardus
ENSGACG00000005423	prpf38a	100	79.365	ENSPTIG00000015419	PRPF38A	71	86.099	Panthera_tigris_altaica
ENSGACG00000005423	prpf38a	100	79.365	ENSPTRG00000000739	PRPF38A	74	86.099	Pan_troglodytes
ENSGACG00000005423	prpf38a	100	79.365	ENSPANG00000015483	PRPF38A	71	86.099	Papio_anubis
ENSGACG00000005423	prpf38a	100	91.961	ENSPKIG00000011439	prpf38a	72	90.135	Paramormyrops_kingsleyae
ENSGACG00000005423	prpf38a	100	79.365	ENSPSIG00000017487	PRPF38A	71	85.650	Pelodiscus_sinensis
ENSGACG00000005423	prpf38a	100	78.413	ENSPEMG00000011212	-	70	79.372	Peromyscus_maniculatus_bairdii
ENSGACG00000005423	prpf38a	100	79.683	ENSPEMG00000023277	-	71	86.099	Peromyscus_maniculatus_bairdii
ENSGACG00000005423	prpf38a	100	76.899	ENSPCIG00000022369	-	71	82.143	Phascolarctos_cinereus
ENSGACG00000005423	prpf38a	100	94.534	ENSPFOG00000004248	prpf38a	100	94.534	Poecilia_formosa
ENSGACG00000005423	prpf38a	100	94.534	ENSPLAG00000010328	prpf38a	100	94.534	Poecilia_latipinna
ENSGACG00000005423	prpf38a	100	94.534	ENSPMEG00000011804	prpf38a	100	94.534	Poecilia_mexicana
ENSGACG00000005423	prpf38a	95	78.930	ENSPREG00000002835	prpf38a	58	94.681	Poecilia_reticulata
ENSGACG00000005423	prpf38a	100	71.562	ENSPPYG00000001348	PRPF38A	71	75.000	Pongo_abelii
ENSGACG00000005423	prpf38a	100	80.000	ENSPCAG00000013328	PRPF38A	71	86.996	Procavia_capensis
ENSGACG00000005423	prpf38a	100	65.916	ENSPCOG00000020709	-	64	77.660	Propithecus_coquereli
ENSGACG00000005423	prpf38a	100	79.365	ENSPCOG00000016387	-	71	86.099	Propithecus_coquereli
ENSGACG00000005423	prpf38a	100	79.365	ENSPVAG00000009803	PRPF38A	71	86.099	Pteropus_vampyrus
ENSGACG00000005423	prpf38a	100	94.534	ENSPNYG00000005571	prpf38a	72	93.722	Pundamilia_nyererei
ENSGACG00000005423	prpf38a	100	82.540	ENSPNAG00000010399	prpf38a	71	91.480	Pygocentrus_nattereri
ENSGACG00000005423	prpf38a	100	80.000	ENSRNOG00000009451	Prpf38a	71	86.547	Rattus_norvegicus
ENSGACG00000005423	prpf38a	100	79.365	ENSRBIG00000036442	PRPF38A	74	86.099	Rhinopithecus_bieti
ENSGACG00000005423	prpf38a	98	68.627	ENSRROG00000040003	-	71	70.507	Rhinopithecus_roxellana
ENSGACG00000005423	prpf38a	100	79.365	ENSRROG00000032788	PRPF38A	71	86.099	Rhinopithecus_roxellana
ENSGACG00000005423	prpf38a	100	79.365	ENSSBOG00000019515	PRPF38A	71	86.099	Saimiri_boliviensis_boliviensis
ENSGACG00000005423	prpf38a	86	73.723	ENSSHAG00000006906	-	66	79.121	Sarcophilus_harrisii
ENSGACG00000005423	prpf38a	96	65.449	ENSSHAG00000006029	-	74	75.336	Sarcophilus_harrisii
ENSGACG00000005423	prpf38a	100	91.667	ENSSFOG00015013572	prpf38a	72	87.054	Scleropages_formosus
ENSGACG00000005423	prpf38a	72	93.722	ENSSMAG00000015379	prpf38a	72	93.722	Scophthalmus_maximus
ENSGACG00000005423	prpf38a	100	95.498	ENSSDUG00000001324	prpf38a	72	94.619	Seriola_dumerili
ENSGACG00000005423	prpf38a	100	95.498	ENSSLDG00000014803	prpf38a	72	94.619	Seriola_lalandi_dorsalis
ENSGACG00000005423	prpf38a	100	64.127	ENSSARG00000014458	PRPF38A	96	67.333	Sorex_araneus
ENSGACG00000005423	prpf38a	100	79.683	ENSSPUG00000013259	PRPF38A	71	86.099	Sphenodon_punctatus
ENSGACG00000005423	prpf38a	72	77.130	ENSSPAG00000010449	prpf38a	68	77.130	Stegastes_partitus
ENSGACG00000005423	prpf38a	100	79.365	ENSSSCG00000028288	PRPF38A	71	86.099	Sus_scrofa
ENSGACG00000005423	prpf38a	100	76.825	ENSTGUG00000008995	PRPF38A	71	82.063	Taeniopygia_guttata
ENSGACG00000005423	prpf38a	72	94.170	ENSTRUG00000003374	prpf38a	68	94.170	Takifugu_rubripes
ENSGACG00000005423	prpf38a	100	93.610	ENSTNIG00000005533	prpf38a	72	92.889	Tetraodon_nigroviridis
ENSGACG00000005423	prpf38a	100	78.730	ENSTBEG00000000725	PRPF38A	71	86.099	Tupaia_belangeri
ENSGACG00000005423	prpf38a	100	79.365	ENSTTRG00000016139	PRPF38A	71	86.099	Tursiops_truncatus
ENSGACG00000005423	prpf38a	100	79.365	ENSUAMG00000000625	PRPF38A	71	86.099	Ursus_americanus
ENSGACG00000005423	prpf38a	100	79.365	ENSUMAG00000022674	PRPF38A	71	86.099	Ursus_maritimus
ENSGACG00000005423	prpf38a	75	84.549	ENSVPAG00000000907	PRPF38A	71	85.650	Vicugna_pacos
ENSGACG00000005423	prpf38a	100	79.365	ENSVVUG00000004475	PRPF38A	71	86.099	Vulpes_vulpes
ENSGACG00000005423	prpf38a	100	79.114	ENSXETG00000008060	prpf38a	71	84.753	Xenopus_tropicalis
ENSGACG00000005423	prpf38a	72	90.667	ENSXCOG00000007393	prpf38a	74	90.667	Xiphophorus_couchianus
ENSGACG00000005423	prpf38a	100	94.534	ENSXMAG00000026143	prpf38a	100	94.534	Xiphophorus_maculatus