EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005431 (Gene tree)
Gene ID: -
Gene Symbol: plecb
Alias: si:ch211-24c14.1
Full Name: plectin b
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 50260 bases
Position: chrgroupXX:3999224-4049483
Accession: ZDB-GENE-100917-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007205	S10_plectin	PF03501.15	1.3e-38	1	1
ENSGACP00000007197	S10_plectin	PF03501.15	6.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007215	-	13923	-	ENSGACP00000007197	4640 (aa)	-	G3NPD3
ENSGACT00000007223	-	2889	-	ENSGACP00000007205	963 (aa)	-	G3NPE1

Gene Model

Click here to download ENSGACG00000005431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005431's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005431	plecb	99	85.861	ENSATEG00000024559	plecb	82	85.737	Anabas_testudineus
ENSGACG00000005431	plecb	99	86.680	ENSACLG00000022613	plecb	84	86.437	Astatotilapia_calliptera
ENSGACG00000005431	plecb	99	84.973	ENSCVAG00000013972	plecb	80	84.807	Cyprinodon_variegatus
ENSGACG00000005431	plecb	97	82.183	ENSELUG00000020803	plecb	82	79.857	Esox_lucius
ENSGACG00000005431	plecb	99	79.080	ENSGMOG00000006545	plecb	100	79.270	Gadus_morhua
ENSGACG00000005431	plecb	98	81.818	ENSIPUG00000020055	plecb	82	78.947	Ictalurus_punctatus
ENSGACG00000005431	plecb	99	84.131	ENSKMAG00000003609	plecb	100	83.936	Kryptolebias_marmoratus
ENSGACG00000005431	plecb	99	86.415	ENSLBEG00000004779	plecb	81	86.217	Labrus_bergylta
ENSGACG00000005431	plecb	99	86.356	ENSMAMG00000001487	plecb	82	86.258	Mastacembelus_armatus
ENSGACG00000005431	plecb	100	72.979	ENSONIG00000013803	pleca	100	70.481	Oreochromis_niloticus
ENSGACG00000005431	plecb	99	84.185	ENSORLG00000023311	plecb	84	84.018	Oryzias_latipes
ENSGACG00000005431	plecb	99	84.162	ENSORLG00020001716	plecb	84	83.996	Oryzias_latipes_hni
ENSGACG00000005431	plecb	99	84.185	ENSORLG00015017959	plecb	84	84.018	Oryzias_latipes_hsok
ENSGACG00000005431	plecb	99	84.168	ENSOMEG00000011949	plecb	83	84.024	Oryzias_melastigma
ENSGACG00000005431	plecb	96	75.761	ENSPKIG00000014989	pleca	90	71.001	Paramormyrops_kingsleyae
ENSGACG00000005431	plecb	99	85.190	ENSPMEG00000014762	plecb	83	84.992	Poecilia_mexicana
ENSGACG00000005431	plecb	99	84.901	ENSPREG00000014625	plecb	84	84.682	Poecilia_reticulata
ENSGACG00000005431	plecb	98	82.112	ENSPNAG00000001581	plecb	80	77.849	Pygocentrus_nattereri
ENSGACG00000005431	plecb	99	86.600	ENSSMAG00000007821	plecb	82	86.600	Scophthalmus_maximus
ENSGACG00000005431	plecb	99	83.967	ENSTRUG00000003715	plecb	84	83.849	Takifugu_rubripes