EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005503 (Gene tree)
Gene ID: -
Gene Symbol: sall3a
Alias: sall3
Full Name: spalt-like transcription factor 3a
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 4603 bases
Position: chrgroupXX:4211933-4216535
Accession: ZDB-GENE-020228-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007268	zf-C2H2	PF00096.26	8.7e-25	1	5
ENSGACP00000007268	zf-C2H2	PF00096.26	8.7e-25	2	5
ENSGACP00000007268	zf-C2H2	PF00096.26	8.7e-25	3	5
ENSGACP00000007268	zf-C2H2	PF00096.26	8.7e-25	4	5
ENSGACP00000007268	zf-C2H2	PF00096.26	8.7e-25	5	5
ENSGACP00000007268	zf-met	PF12874.7	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007286	-	3990	-	ENSGACP00000007268	1329 (aa)	-	G3NPK4

Gene Model

Click here to download ENSGACG00000005503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005503	sall3a	98	44.896	ENSGACG00000016702	sall1a	97	45.233
ENSGACG00000005503	sall3a	94	63.492	ENSGACG00000002533	sall3b	97	63.492
ENSGACG00000005503	sall3a	60	65.385	ENSGACG00000011124	sall4	64	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005503	sall3a	70	77.647	ENSG00000256463	SALL3	97	77.647	Homo_sapiens
ENSGACG00000005503	sall3a	100	82.266	ENSAPOG00000020922	sall3a	97	83.002	Acanthochromis_polyacanthus
ENSGACG00000005503	sall3a	94	66.400	ENSAPOG00000004264	sall3b	97	66.400	Acanthochromis_polyacanthus
ENSGACG00000005503	sall3a	73	65.524	ENSAMEG00000010206	SALL3	99	59.718	Ailuropoda_melanoleuca
ENSGACG00000005503	sall3a	82	88.448	ENSACIG00000014041	sall3a	98	88.448	Amphilophus_citrinellus
ENSGACG00000005503	sall3a	70	66.400	ENSACIG00000019407	sall3b	96	66.400	Amphilophus_citrinellus
ENSGACG00000005503	sall3a	100	84.156	ENSAOCG00000010863	sall3a	96	94.118	Amphiprion_ocellaris
ENSGACG00000005503	sall3a	95	66.932	ENSAOCG00000012779	sall3b	97	66.932	Amphiprion_ocellaris
ENSGACG00000005503	sall3a	98	87.726	ENSAPEG00000019278	sall3a	98	87.726	Amphiprion_percula
ENSGACG00000005503	sall3a	73	66.135	ENSAPEG00000018170	sall3b	99	66.135	Amphiprion_percula
ENSGACG00000005503	sall3a	65	67.490	ENSATEG00000004914	sall3b	97	66.800	Anabas_testudineus
ENSGACG00000005503	sall3a	79	100.000	ENSATEG00000024524	sall3a	98	97.436	Anabas_testudineus
ENSGACG00000005503	sall3a	95	79.216	ENSAPLG00000013214	SALL3	99	79.216	Anas_platyrhynchos
ENSGACG00000005503	sall3a	95	79.216	ENSACAG00000000478	SALL3	97	79.216	Anolis_carolinensis
ENSGACG00000005503	sall3a	100	57.396	ENSANAG00000032412	SALL3	98	58.315	Aotus_nancymaae
ENSGACG00000005503	sall3a	66	66.400	ENSACLG00000001619	sall3b	96	66.400	Astatotilapia_calliptera
ENSGACG00000005503	sall3a	98	88.448	ENSACLG00000022451	sall3a	99	88.448	Astatotilapia_calliptera
ENSGACG00000005503	sall3a	95	83.594	ENSAMXG00000011185	sall3a	94	93.333	Astyanax_mexicanus
ENSGACG00000005503	sall3a	60	67.024	ENSAMXG00000035442	sall3b	86	65.625	Astyanax_mexicanus
ENSGACG00000005503	sall3a	78	73.622	ENSBTAG00000050200	SALL3	97	73.622	Bos_taurus
ENSGACG00000005503	sall3a	83	76.863	ENSCJAG00000007332	SALL3	97	76.863	Callithrix_jacchus
ENSGACG00000005503	sall3a	69	77.255	ENSCAFG00000000013	SALL3	99	77.255	Canis_familiaris
ENSGACG00000005503	sall3a	74	65.737	ENSCAFG00020015092	SALL3	100	61.048	Canis_lupus_dingo
ENSGACG00000005503	sall3a	73	64.718	ENSCHIG00000000145	SALL3	98	58.524	Capra_hircus
ENSGACG00000005503	sall3a	71	76.078	ENSTSYG00000028846	SALL3	99	76.078	Carlito_syrichta
ENSGACG00000005503	sall3a	78	76.863	ENSCAPG00000006496	SALL3	94	76.863	Cavia_aperea
ENSGACG00000005503	sall3a	70	76.863	ENSCPOG00000008546	SALL3	99	76.863	Cavia_porcellus
ENSGACG00000005503	sall3a	95	76.471	ENSCCAG00000034863	SALL3	97	76.471	Cebus_capucinus
ENSGACG00000005503	sall3a	68	77.255	ENSCATG00000029727	SALL3	97	77.255	Cercocebus_atys
ENSGACG00000005503	sall3a	68	77.255	ENSCLAG00000007727	SALL3	99	77.255	Chinchilla_lanigera
ENSGACG00000005503	sall3a	73	65.279	ENSCSAG00000018244	SALL3	98	59.320	Chlorocebus_sabaeus
ENSGACG00000005503	sall3a	65	68.182	ENSCHOG00000013939	-	91	68.182	Choloepus_hoffmanni
ENSGACG00000005503	sall3a	95	80.392	ENSCPBG00000003657	SALL3	98	80.392	Chrysemys_picta_bellii
ENSGACG00000005503	sall3a	71	72.881	ENSCANG00000030302	SALL3	99	72.881	Colobus_angolensis_palliatus
ENSGACG00000005503	sall3a	95	78.039	ENSCGRG00001018203	Sall3	97	78.039	Cricetulus_griseus_chok1gshd
ENSGACG00000005503	sall3a	95	76.471	ENSCGRG00000017127	Sall3	99	76.471	Cricetulus_griseus_crigri
ENSGACG00000005503	sall3a	100	78.944	ENSCSEG00000009058	sall3a	98	79.209	Cynoglossus_semilaevis
ENSGACG00000005503	sall3a	70	65.000	ENSCSEG00000009569	sall3b	96	65.000	Cynoglossus_semilaevis
ENSGACG00000005503	sall3a	70	63.462	ENSCVAG00000017005	sall3b	91	72.941	Cyprinodon_variegatus
ENSGACG00000005503	sall3a	81	88.390	ENSCVAG00000009684	sall3a	95	88.390	Cyprinodon_variegatus
ENSGACG00000005503	sall3a	93	63.462	ENSDARG00000057586	sall3b	96	63.462	Danio_rerio
ENSGACG00000005503	sall3a	95	76.562	ENSDARG00000079613	sall3a	98	76.562	Danio_rerio
ENSGACG00000005503	sall3a	79	64.257	ENSDNOG00000025483	SALL3	96	65.181	Dasypus_novemcinctus
ENSGACG00000005503	sall3a	71	64.025	ENSDORG00000002702	Sall3	87	64.375	Dipodomys_ordii
ENSGACG00000005503	sall3a	75	60.904	ENSETEG00000001481	SALL3	92	62.798	Echinops_telfairi
ENSGACG00000005503	sall3a	95	77.647	ENSEASG00005002071	SALL3	97	77.647	Equus_asinus_asinus
ENSGACG00000005503	sall3a	95	77.647	ENSECAG00000015414	SALL3	97	77.647	Equus_caballus
ENSGACG00000005503	sall3a	93	69.323	ENSELUG00000009541	sall3b	97	69.323	Esox_lucius
ENSGACG00000005503	sall3a	100	70.014	ENSELUG00000020351	sall3a	99	72.635	Esox_lucius
ENSGACG00000005503	sall3a	99	59.419	ENSFCAG00000028839	SALL3	97	74.000	Felis_catus
ENSGACG00000005503	sall3a	95	79.216	ENSFALG00000013343	SALL3	97	79.216	Ficedula_albicollis
ENSGACG00000005503	sall3a	68	76.078	ENSFDAG00000014697	SALL3	98	76.078	Fukomys_damarensis
ENSGACG00000005503	sall3a	100	72.584	ENSGMOG00000006649	sall3a	100	72.639	Gadus_morhua
ENSGACG00000005503	sall3a	95	78.824	ENSGALG00000041404	SALL3	95	78.824	Gallus_gallus
ENSGACG00000005503	sall3a	94	61.538	ENSGAFG00000014435	-	99	61.538	Gambusia_affinis
ENSGACG00000005503	sall3a	100	80.733	ENSGAFG00000001581	sall3a	97	89.706	Gambusia_affinis
ENSGACG00000005503	sall3a	95	80.000	ENSGAGG00000000925	SALL3	97	80.000	Gopherus_agassizii
ENSGACG00000005503	sall3a	77	69.231	ENSGGOG00000008127	SALL3	97	77.647	Gorilla_gorilla
ENSGACG00000005503	sall3a	70	66.537	ENSHBUG00000018127	sall3b	95	66.537	Haplochromis_burtoni
ENSGACG00000005503	sall3a	98	88.448	ENSHBUG00000004486	sall3a	98	88.448	Haplochromis_burtoni
ENSGACG00000005503	sall3a	95	76.471	ENSHGLG00000000824	SALL3	97	76.471	Heterocephalus_glaber_female
ENSGACG00000005503	sall3a	95	76.471	ENSHGLG00100008694	SALL3	72	76.471	Heterocephalus_glaber_male
ENSGACG00000005503	sall3a	92	63.462	ENSHCOG00000004745	sall3b	97	63.462	Hippocampus_comes
ENSGACG00000005503	sall3a	91	86.940	ENSHCOG00000010423	sall3a	99	91.803	Hippocampus_comes
ENSGACG00000005503	sall3a	78	63.462	ENSIPUG00000003006	sall3b	85	63.462	Ictalurus_punctatus
ENSGACG00000005503	sall3a	99	57.495	ENSIPUG00000003378	sall3	98	63.936	Ictalurus_punctatus
ENSGACG00000005503	sall3a	95	76.863	ENSSTOG00000004145	SALL3	98	76.863	Ictidomys_tridecemlineatus
ENSGACG00000005503	sall3a	98	58.921	ENSJJAG00000014351	Sall3	98	59.148	Jaculus_jaculus
ENSGACG00000005503	sall3a	66	63.462	ENSKMAG00000012418	sall3b	97	63.462	Kryptolebias_marmoratus
ENSGACG00000005503	sall3a	95	90.226	ENSKMAG00000003846	sall3a	98	93.103	Kryptolebias_marmoratus
ENSGACG00000005503	sall3a	71	64.729	ENSLBEG00000015706	sall3b	96	64.729	Labrus_bergylta
ENSGACG00000005503	sall3a	100	75.887	ENSLBEG00000005152	sall3a	98	89.892	Labrus_bergylta
ENSGACG00000005503	sall3a	95	85.098	ENSLOCG00000007831	sall3a	98	85.098	Lepisosteus_oculatus
ENSGACG00000005503	sall3a	99	60.693	ENSLAFG00000013521	SALL3	99	61.335	Loxodonta_africana
ENSGACG00000005503	sall3a	79	77.255	ENSMFAG00000031402	SALL3	71	77.255	Macaca_fascicularis
ENSGACG00000005503	sall3a	71	63.265	ENSMAMG00000006101	sall3b	95	63.265	Mastacembelus_armatus
ENSGACG00000005503	sall3a	99	72.555	ENSMAMG00000001276	sall3a	98	80.385	Mastacembelus_armatus
ENSGACG00000005503	sall3a	66	66.800	ENSMZEG00005026224	sall3b	96	66.800	Maylandia_zebra
ENSGACG00000005503	sall3a	98	88.448	ENSMZEG00005007586	sall3a	99	88.448	Maylandia_zebra
ENSGACG00000005503	sall3a	95	79.216	ENSMGAG00000002297	SALL3	97	79.216	Meleagris_gallopavo
ENSGACG00000005503	sall3a	95	78.039	ENSMAUG00000011828	Sall3	97	78.039	Mesocricetus_auratus
ENSGACG00000005503	sall3a	71	77.165	ENSMICG00000017395	SALL3	97	77.165	Microcebus_murinus
ENSGACG00000005503	sall3a	93	78.431	ENSMOCG00000013205	Sall3	97	78.431	Microtus_ochrogaster
ENSGACG00000005503	sall3a	82	89.231	ENSMMOG00000003253	sall3a	99	89.231	Mola_mola
ENSGACG00000005503	sall3a	72	64.032	ENSMMOG00000014246	sall3b	96	64.032	Mola_mola
ENSGACG00000005503	sall3a	95	78.824	ENSMODG00000012231	SALL3	97	78.824	Monodelphis_domestica
ENSGACG00000005503	sall3a	66	64.341	ENSMALG00000015200	sall3b	98	64.341	Monopterus_albus
ENSGACG00000005503	sall3a	99	76.780	ENSMALG00000003343	sall3a	99	76.780	Monopterus_albus
ENSGACG00000005503	sall3a	95	78.431	MGP_CAROLIEiJ_G0022442	Sall3	97	78.431	Mus_caroli
ENSGACG00000005503	sall3a	95	78.039	ENSMUSG00000024565	Sall3	97	78.039	Mus_musculus
ENSGACG00000005503	sall3a	95	78.431	MGP_PahariEiJ_G0019170	Sall3	97	78.431	Mus_pahari
ENSGACG00000005503	sall3a	95	78.431	MGP_SPRETEiJ_G0023357	Sall3	97	78.431	Mus_spretus
ENSGACG00000005503	sall3a	80	80.808	ENSMPUG00000016646	SALL3	97	81.313	Mustela_putorius_furo
ENSGACG00000005503	sall3a	100	60.088	ENSMLUG00000010582	SALL3	100	60.472	Myotis_lucifugus
ENSGACG00000005503	sall3a	95	78.431	ENSNGAG00000023772	Sall3	97	78.431	Nannospalax_galili
ENSGACG00000005503	sall3a	69	66.800	ENSNBRG00000016034	sall3b	95	66.800	Neolamprologus_brichardi
ENSGACG00000005503	sall3a	99	81.569	ENSNBRG00000008974	sall3a	100	82.013	Neolamprologus_brichardi
ENSGACG00000005503	sall3a	72	75.294	ENSNLEG00000008217	SALL3	97	76.863	Nomascus_leucogenys
ENSGACG00000005503	sall3a	88	60.284	ENSODEG00000002692	SALL3	98	58.254	Octodon_degus
ENSGACG00000005503	sall3a	66	65.251	ENSONIG00000013791	sall3b	98	65.251	Oreochromis_niloticus
ENSGACG00000005503	sall3a	100	77.993	ENSONIG00000007305	sall3a	98	79.182	Oreochromis_niloticus
ENSGACG00000005503	sall3a	70	77.381	ENSOCUG00000029398	SALL3	98	77.381	Oryctolagus_cuniculus
ENSGACG00000005503	sall3a	97	84.838	ENSORLG00000020718	sall3a	98	84.838	Oryzias_latipes
ENSGACG00000005503	sall3a	82	63.462	ENSORLG00020015105	sall3b	87	63.462	Oryzias_latipes_hni
ENSGACG00000005503	sall3a	99	78.967	ENSORLG00020001794	sall3a	100	78.745	Oryzias_latipes_hni
ENSGACG00000005503	sall3a	69	63.462	ENSORLG00015005877	sall3b	94	63.478	Oryzias_latipes_hsok
ENSGACG00000005503	sall3a	99	78.951	ENSORLG00015018152	sall3a	97	91.379	Oryzias_latipes_hsok
ENSGACG00000005503	sall3a	96	86.517	ENSOMEG00000011390	sall3a	98	86.517	Oryzias_melastigma
ENSGACG00000005503	sall3a	72	65.123	ENSOGAG00000031681	SALL3	98	58.148	Otolemur_garnettii
ENSGACG00000005503	sall3a	85	67.073	ENSOARG00000004353	SALL3	93	65.517	Ovis_aries
ENSGACG00000005503	sall3a	79	64.286	ENSPPAG00000029586	-	99	71.373	Pan_paniscus
ENSGACG00000005503	sall3a	77	69.231	ENSPTRG00000010126	SALL3	97	77.647	Pan_troglodytes
ENSGACG00000005503	sall3a	68	76.863	ENSPANG00000006485	SALL3	99	76.863	Papio_anubis
ENSGACG00000005503	sall3a	99	59.704	ENSPKIG00000018271	SALL3	96	78.125	Paramormyrops_kingsleyae
ENSGACG00000005503	sall3a	90	88.811	ENSPKIG00000013427	sall3a	94	88.811	Paramormyrops_kingsleyae
ENSGACG00000005503	sall3a	95	79.608	ENSPSIG00000008556	SALL3	99	84.925	Pelodiscus_sinensis
ENSGACG00000005503	sall3a	66	57.692	ENSPMGG00000002913	sall3b	95	61.538	Periophthalmus_magnuspinnatus
ENSGACG00000005503	sall3a	95	86.923	ENSPMGG00000017042	sall3a	98	75.920	Periophthalmus_magnuspinnatus
ENSGACG00000005503	sall3a	99	58.206	ENSPEMG00000022799	Sall3	98	60.192	Peromyscus_maniculatus_bairdii
ENSGACG00000005503	sall3a	95	78.824	ENSPCIG00000002472	SALL3	97	78.824	Phascolarctos_cinereus
ENSGACG00000005503	sall3a	62	63.462	ENSPFOG00000013292	sall3b	98	63.462	Poecilia_formosa
ENSGACG00000005503	sall3a	98	86.331	ENSPFOG00000019127	sall3a	98	86.331	Poecilia_formosa
ENSGACG00000005503	sall3a	95	88.764	ENSPLAG00000018123	sall3a	98	91.406	Poecilia_latipinna
ENSGACG00000005503	sall3a	62	63.462	ENSPLAG00000013919	sall3b	94	63.462	Poecilia_latipinna
ENSGACG00000005503	sall3a	76	47.763	ENSPMEG00000023703	sall3b	65	87.500	Poecilia_mexicana
ENSGACG00000005503	sall3a	87	80.597	ENSPMEG00000014946	sall3a	95	81.481	Poecilia_mexicana
ENSGACG00000005503	sall3a	99	43.802	ENSPREG00000015079	sall3b	97	44.120	Poecilia_reticulata
ENSGACG00000005503	sall3a	87	82.222	ENSPREG00000014420	sall3a	93	82.222	Poecilia_reticulata
ENSGACG00000005503	sall3a	68	78.039	ENSPPYG00000009253	SALL3	99	78.039	Pongo_abelii
ENSGACG00000005503	sall3a	99	60.355	ENSPCAG00000006522	SALL3	99	60.355	Procavia_capensis
ENSGACG00000005503	sall3a	72	76.772	ENSPCOG00000012553	SALL3	97	76.772	Propithecus_coquereli
ENSGACG00000005503	sall3a	99	50.148	ENSPVAG00000014645	SALL3	99	50.740	Pteropus_vampyrus
ENSGACG00000005503	sall3a	69	66.800	ENSPNYG00000005353	sall3b	95	66.800	Pundamilia_nyererei
ENSGACG00000005503	sall3a	99	82.013	ENSPNYG00000012783	sall3a	100	82.013	Pundamilia_nyererei
ENSGACG00000005503	sall3a	90	63.636	ENSPNAG00000017141	sall3b	94	63.636	Pygocentrus_nattereri
ENSGACG00000005503	sall3a	88	61.725	ENSRNOG00000026116	Sall3	97	62.479	Rattus_norvegicus
ENSGACG00000005503	sall3a	68	77.255	ENSRBIG00000036190	SALL3	72	77.255	Rhinopithecus_bieti
ENSGACG00000005503	sall3a	73	77.647	ENSRROG00000034130	SALL3	98	77.647	Rhinopithecus_roxellana
ENSGACG00000005503	sall3a	78	78.039	ENSSBOG00000023380	SALL3	99	78.039	Saimiri_boliviensis_boliviensis
ENSGACG00000005503	sall3a	95	79.216	ENSSHAG00000015872	SALL3	97	79.216	Sarcophilus_harrisii
ENSGACG00000005503	sall3a	92	81.349	ENSSFOG00015012223	sall3a	99	92.857	Scleropages_formosus
ENSGACG00000005503	sall3a	100	60.029	ENSSFOG00015009159	SALL3	96	78.689	Scleropages_formosus
ENSGACG00000005503	sall3a	66	67.331	ENSSMAG00000019762	sall3b	97	67.331	Scophthalmus_maximus
ENSGACG00000005503	sall3a	98	86.364	ENSSMAG00000007674	sall3a	98	86.063	Scophthalmus_maximus
ENSGACG00000005503	sall3a	100	80.375	ENSSDUG00000011099	sall3a	98	80.599	Seriola_dumerili
ENSGACG00000005503	sall3a	75	62.000	ENSSDUG00000010584	sall3b	98	62.000	Seriola_dumerili
ENSGACG00000005503	sall3a	72	57.290	ENSSLDG00000016800	sall3b	97	51.500	Seriola_lalandi_dorsalis
ENSGACG00000005503	sall3a	100	80.766	ENSSLDG00000012706	sall3a	98	80.992	Seriola_lalandi_dorsalis
ENSGACG00000005503	sall3a	90	93.976	ENSSPAG00000013114	sall3a	98	93.750	Stegastes_partitus
ENSGACG00000005503	sall3a	70	66.537	ENSSPAG00000003172	sall3b	96	66.537	Stegastes_partitus
ENSGACG00000005503	sall3a	99	59.108	ENSSSCG00000004858	SALL3	98	60.119	Sus_scrofa
ENSGACG00000005503	sall3a	95	68.077	ENSTGUG00000006541	SALL3	99	68.077	Taeniopygia_guttata
ENSGACG00000005503	sall3a	73	94.444	ENSTRUG00000017423	sall3a	99	94.444	Takifugu_rubripes
ENSGACG00000005503	sall3a	84	79.290	ENSTNIG00000001257	sall3a	98	79.183	Tetraodon_nigroviridis
ENSGACG00000005503	sall3a	87	62.745	ENSTBEG00000008964	SALL3	82	62.745	Tupaia_belangeri
ENSGACG00000005503	sall3a	73	62.727	ENSTTRG00000004958	SALL3	86	63.071	Tursiops_truncatus
ENSGACG00000005503	sall3a	99	60.179	ENSUAMG00000016908	SALL3	97	76.078	Ursus_americanus
ENSGACG00000005503	sall3a	73	85.714	ENSVVUG00000018838	SALL3	100	67.347	Vulpes_vulpes
ENSGACG00000005503	sall3a	94	80.800	ENSXETG00000000845	sall3	97	80.800	Xenopus_tropicalis
ENSGACG00000005503	sall3a	68	61.616	ENSXCOG00000018799	sall3b	97	61.538	Xiphophorus_couchianus
ENSGACG00000005503	sall3a	100	80.645	ENSXCOG00000016907	sall3a	98	81.305	Xiphophorus_couchianus
ENSGACG00000005503	sall3a	98	85.971	ENSXMAG00000023447	sall3a	98	85.971	Xiphophorus_maculatus
ENSGACG00000005503	sall3a	83	63.830	ENSXMAG00000000798	sall3b	93	61.616	Xiphophorus_maculatus