EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005550 (Gene tree)
Gene ID: -
Gene Symbol: lrrc47
Alias: fe50f06|si:ch211-147a11.7|wu:fe50f06
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3388 bases
Position: chrgroupXII:6434980-6438367
Accession: ZDB-GENE-060503-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007344	B3_4	PF03483.17	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007362	-	1694	-	ENSGACP00000007344	559 (aa)	-	G3NPS9

Gene Model

Click here to download ENSGACG00000005550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005550	lrrc47	99	53.043	ENSG00000130764	LRRC47	99	53.043	Homo_sapiens
ENSGACG00000005550	lrrc47	99	78.393	ENSAPOG00000019553	lrrc47	100	78.571	Acanthochromis_polyacanthus
ENSGACG00000005550	lrrc47	75	56.787	ENSAMEG00000009152	LRRC47	94	57.339	Ailuropoda_melanoleuca
ENSGACG00000005550	lrrc47	67	61.518	ENSAPLG00000003167	LRRC47	99	60.638	Anas_platyrhynchos
ENSGACG00000005550	lrrc47	66	60.743	ENSACAG00000008267	LRRC47	100	58.886	Anolis_carolinensis
ENSGACG00000005550	lrrc47	99	52.696	ENSANAG00000025576	LRRC47	99	52.696	Aotus_nancymaae
ENSGACG00000005550	lrrc47	99	52.696	ENSBTAG00000004738	LRRC47	98	52.522	Bos_taurus
ENSGACG00000005550	lrrc47	99	53.310	ENSCAFG00000019492	LRRC47	97	53.310	Canis_familiaris
ENSGACG00000005550	lrrc47	98	53.497	ENSCAFG00020009667	LRRC47	99	53.497	Canis_lupus_dingo
ENSGACG00000005550	lrrc47	99	53.217	ENSCHIG00000022607	LRRC47	98	53.054	Capra_hircus
ENSGACG00000005550	lrrc47	95	52.973	ENSTSYG00000009326	LRRC47	97	52.910	Carlito_syrichta
ENSGACG00000005550	lrrc47	65	57.713	ENSCAPG00000016517	LRRC47	99	57.181	Cavia_aperea
ENSGACG00000005550	lrrc47	99	52.696	ENSCPOG00000014931	LRRC47	95	52.439	Cavia_porcellus
ENSGACG00000005550	lrrc47	99	52.870	ENSCCAG00000024895	LRRC47	99	52.870	Cebus_capucinus
ENSGACG00000005550	lrrc47	99	53.472	ENSCATG00000029337	LRRC47	99	53.565	Cercocebus_atys
ENSGACG00000005550	lrrc47	99	53.147	ENSCLAG00000006093	LRRC47	99	53.240	Chinchilla_lanigera
ENSGACG00000005550	lrrc47	99	53.472	ENSCSAG00000000727	LRRC47	99	53.565	Chlorocebus_sabaeus
ENSGACG00000005550	lrrc47	99	51.010	ENSCPBG00000019404	LRRC47	98	51.993	Chrysemys_picta_bellii
ENSGACG00000005550	lrrc47	79	54.466	ENSCANG00000030701	LRRC47	96	54.585	Colobus_angolensis_palliatus
ENSGACG00000005550	lrrc47	99	53.403	ENSCGRG00001015159	Lrrc47	89	53.229	Cricetulus_griseus_chok1gshd
ENSGACG00000005550	lrrc47	66	57.672	ENSCGRG00000017336	Lrrc47	99	57.867	Cricetulus_griseus_crigri
ENSGACG00000005550	lrrc47	99	74.510	ENSCSEG00000006217	lrrc47	96	73.262	Cynoglossus_semilaevis
ENSGACG00000005550	lrrc47	65	58.621	ENSDORG00000016594	Lrrc47	99	59.043	Dipodomys_ordii
ENSGACG00000005550	lrrc47	99	53.646	ENSEASG00005021788	LRRC47	99	53.565	Equus_asinus_asinus
ENSGACG00000005550	lrrc47	99	53.993	ENSECAG00000022472	LRRC47	89	53.913	Equus_caballus
ENSGACG00000005550	lrrc47	99	65.789	ENSELUG00000017544	lrrc47	98	65.789	Esox_lucius
ENSGACG00000005550	lrrc47	96	51.449	ENSFCAG00000011632	LRRC47	95	51.449	Felis_catus
ENSGACG00000005550	lrrc47	70	60.506	ENSFALG00000009631	LRRC47	98	55.882	Ficedula_albicollis
ENSGACG00000005550	lrrc47	99	66.250	ENSGMOG00000015674	lrrc47	100	67.023	Gadus_morhua
ENSGACG00000005550	lrrc47	98	51.404	ENSGALG00000050995	LRRC47	99	51.053	Gallus_gallus
ENSGACG00000005550	lrrc47	99	50.336	ENSGAGG00000022584	LRRC47	99	51.510	Gopherus_agassizii
ENSGACG00000005550	lrrc47	99	53.565	ENSGGOG00000015571	LRRC47	99	53.565	Gorilla_gorilla
ENSGACG00000005550	lrrc47	99	52.348	ENSHGLG00000018278	LRRC47	95	51.916	Heterocephalus_glaber_female
ENSGACG00000005550	lrrc47	70	57.072	ENSHGLG00100008507	LRRC47	99	56.468	Heterocephalus_glaber_male
ENSGACG00000005550	lrrc47	99	74.107	ENSHCOG00000006348	lrrc47	98	73.036	Hippocampus_comes
ENSGACG00000005550	lrrc47	99	53.833	ENSSTOG00000027559	LRRC47	99	54.007	Ictidomys_tridecemlineatus
ENSGACG00000005550	lrrc47	99	54.530	ENSJJAG00000017474	Lrrc47	96	54.355	Jaculus_jaculus
ENSGACG00000005550	lrrc47	99	76.786	ENSKMAG00000003414	lrrc47	100	76.964	Kryptolebias_marmoratus
ENSGACG00000005550	lrrc47	99	53.739	ENSLAFG00000011657	LRRC47	98	53.217	Loxodonta_africana
ENSGACG00000005550	lrrc47	99	41.043	ENSMFAG00000045730	LRRC47	88	54.237	Macaca_fascicularis
ENSGACG00000005550	lrrc47	99	54.325	ENSMNEG00000042488	LRRC47	98	53.565	Macaca_nemestrina
ENSGACG00000005550	lrrc47	77	54.464	ENSMLEG00000043735	LRRC47	90	54.586	Mandrillus_leucophaeus
ENSGACG00000005550	lrrc47	98	54.291	ENSMAUG00000021337	Lrrc47	97	54.116	Mesocricetus_auratus
ENSGACG00000005550	lrrc47	99	52.787	ENSMICG00000026816	LRRC47	99	52.787	Microcebus_murinus
ENSGACG00000005550	lrrc47	99	54.417	ENSMOCG00000021279	Lrrc47	99	54.240	Microtus_ochrogaster
ENSGACG00000005550	lrrc47	99	77.321	ENSMMOG00000017007	lrrc47	100	76.786	Mola_mola
ENSGACG00000005550	lrrc47	99	42.637	ENSMODG00000006554	LRRC47	98	51.748	Monodelphis_domestica
ENSGACG00000005550	lrrc47	99	54.101	MGP_CAROLIEiJ_G0026864	Lrrc47	99	53.713	Mus_caroli
ENSGACG00000005550	lrrc47	99	53.927	ENSMUSG00000029028	Lrrc47	99	53.541	Mus_musculus
ENSGACG00000005550	lrrc47	99	53.752	MGP_PahariEiJ_G0029212	Lrrc47	99	53.368	Mus_pahari
ENSGACG00000005550	lrrc47	99	54.101	MGP_SPRETEiJ_G0027857	Lrrc47	99	53.713	Mus_spretus
ENSGACG00000005550	lrrc47	65	58.090	ENSMPUG00000007321	LRRC47	75	58.090	Mustela_putorius_furo
ENSGACG00000005550	lrrc47	98	52.364	ENSNGAG00000022153	Lrrc47	98	53.054	Nannospalax_galili
ENSGACG00000005550	lrrc47	99	52.265	ENSNLEG00000008131	LRRC47	99	52.531	Nomascus_leucogenys
ENSGACG00000005550	lrrc47	84	53.893	ENSODEG00000010882	LRRC47	93	53.799	Octodon_degus
ENSGACG00000005550	lrrc47	96	76.155	ENSORLG00000002532	lrrc47	100	75.970	Oryzias_latipes
ENSGACG00000005550	lrrc47	99	75.893	ENSORLG00020019601	lrrc47	100	75.714	Oryzias_latipes_hni
ENSGACG00000005550	lrrc47	99	75.714	ENSORLG00015014040	lrrc47	100	75.536	Oryzias_latipes_hsok
ENSGACG00000005550	lrrc47	99	75.179	ENSOMEG00000008989	lrrc47	100	75.000	Oryzias_melastigma
ENSGACG00000005550	lrrc47	99	53.979	ENSOGAG00000001553	LRRC47	99	52.870	Otolemur_garnettii
ENSGACG00000005550	lrrc47	99	51.304	ENSOARG00000015290	LRRC47	98	51.130	Ovis_aries
ENSGACG00000005550	lrrc47	74	56.909	ENSPPAG00000036370	-	98	56.909	Pan_paniscus
ENSGACG00000005550	lrrc47	99	51.979	ENSPPRG00000005261	LRRC47	98	52.091	Panthera_pardus
ENSGACG00000005550	lrrc47	99	53.565	ENSPTRG00000000068	LRRC47	99	53.565	Pan_troglodytes
ENSGACG00000005550	lrrc47	99	53.472	ENSPANG00000012437	LRRC47	99	53.565	Papio_anubis
ENSGACG00000005550	lrrc47	64	61.957	ENSPSIG00000004196	LRRC47	97	61.580	Pelodiscus_sinensis
ENSGACG00000005550	lrrc47	65	59.893	ENSPEMG00000021068	Lrrc47	99	59.467	Peromyscus_maniculatus_bairdii
ENSGACG00000005550	lrrc47	98	54.371	ENSPCIG00000003638	LRRC47	98	54.720	Phascolarctos_cinereus
ENSGACG00000005550	lrrc47	94	74.053	ENSPFOG00000000992	lrrc47	94	73.864	Poecilia_formosa
ENSGACG00000005550	lrrc47	99	74.419	ENSPLAG00000008077	lrrc47	100	74.240	Poecilia_latipinna
ENSGACG00000005550	lrrc47	99	74.061	ENSPMEG00000007367	lrrc47	100	74.061	Poecilia_mexicana
ENSGACG00000005550	lrrc47	99	53.739	ENSPPYG00000001960	LRRC47	99	53.739	Pongo_abelii
ENSGACG00000005550	lrrc47	99	53.310	ENSPCOG00000019161	LRRC47	98	53.310	Propithecus_coquereli
ENSGACG00000005550	lrrc47	98	53.158	ENSPVAG00000009839	LRRC47	98	53.333	Pteropus_vampyrus
ENSGACG00000005550	lrrc47	98	63.441	ENSPNAG00000017982	lrrc47	98	63.784	Pygocentrus_nattereri
ENSGACG00000005550	lrrc47	99	52.850	ENSRNOG00000024796	Lrrc47	99	52.677	Rattus_norvegicus
ENSGACG00000005550	lrrc47	99	53.472	ENSRBIG00000019437	LRRC47	99	53.565	Rhinopithecus_bieti
ENSGACG00000005550	lrrc47	99	53.472	ENSRROG00000043182	LRRC47	99	53.565	Rhinopithecus_roxellana
ENSGACG00000005550	lrrc47	79	54.923	ENSSBOG00000026334	LRRC47	92	55.310	Saimiri_boliviensis_boliviensis
ENSGACG00000005550	lrrc47	98	48.780	ENSSHAG00000007360	LRRC47	98	48.611	Sarcophilus_harrisii
ENSGACG00000005550	lrrc47	99	78.788	ENSSMAG00000009344	lrrc47	100	78.788	Scophthalmus_maximus
ENSGACG00000005550	lrrc47	99	78.393	ENSSDUG00000014618	lrrc47	100	78.750	Seriola_dumerili
ENSGACG00000005550	lrrc47	99	78.571	ENSSLDG00000018908	lrrc47	100	78.750	Seriola_lalandi_dorsalis
ENSGACG00000005550	lrrc47	99	52.840	ENSSPUG00000010277	LRRC47	97	53.415	Sphenodon_punctatus
ENSGACG00000005550	lrrc47	99	79.821	ENSSPAG00000005188	lrrc47	100	80.000	Stegastes_partitus
ENSGACG00000005550	lrrc47	98	53.578	ENSSSCG00000039516	LRRC47	98	53.752	Sus_scrofa
ENSGACG00000005550	lrrc47	70	59.848	ENSTGUG00000002737	LRRC47	98	60.202	Taeniopygia_guttata
ENSGACG00000005550	lrrc47	99	75.313	ENSTRUG00000017696	lrrc47	100	75.134	Takifugu_rubripes
ENSGACG00000005550	lrrc47	99	75.000	ENSTNIG00000010923	lrrc47	99	75.000	Tetraodon_nigroviridis
ENSGACG00000005550	lrrc47	99	53.125	ENSTTRG00000011751	LRRC47	99	53.391	Tursiops_truncatus
ENSGACG00000005550	lrrc47	89	53.372	ENSUAMG00000012080	LRRC47	98	53.282	Ursus_americanus
ENSGACG00000005550	lrrc47	65	58.201	ENSUMAG00000010781	LRRC47	81	57.632	Ursus_maritimus
ENSGACG00000005550	lrrc47	99	49.306	ENSVVUG00000027118	LRRC47	98	49.043	Vulpes_vulpes
ENSGACG00000005550	lrrc47	96	56.624	ENSXETG00000006029	lrrc47	96	56.806	Xenopus_tropicalis
ENSGACG00000005550	lrrc47	98	73.418	ENSXCOG00000002813	lrrc47	98	73.056	Xiphophorus_couchianus
ENSGACG00000005550	lrrc47	99	73.022	ENSXMAG00000019386	lrrc47	100	72.842	Xiphophorus_maculatus