EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGACG00000005581 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Plus strand
Length: 3975 bases
Position: chrgroupX:8098839-8102813
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007376	R3H	PF01424.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007395	-	1572	-	ENSGACP00000007376	524 (aa)	-	G3NPW1

Gene Model

Click here to download ENSGACG00000005581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005581	-	54	43.103	ENSG00000179912	R3HDM2	64	54.412	Homo_sapiens
ENSGACG00000005581	-	90	69.811	ENSAPOG00000021873	-	67	69.811	Acanthochromis_polyacanthus
ENSGACG00000005581	-	98	63.303	ENSAOCG00000003840	-	69	63.570	Amphiprion_ocellaris
ENSGACG00000005581	-	98	63.486	ENSAPEG00000014325	-	67	82.857	Amphiprion_percula
ENSGACG00000005581	-	98	60.989	ENSATEG00000015519	-	69	61.384	Anabas_testudineus
ENSGACG00000005581	-	99	52.166	ENSCVAG00000007202	-	70	54.463	Cyprinodon_variegatus
ENSGACG00000005581	-	76	44.522	ENSELUG00000002532	-	74	40.821	Esox_lucius
ENSGACG00000005581	-	99	52.878	ENSFHEG00000007936	-	70	53.370	Fundulus_heteroclitus
ENSGACG00000005581	-	78	74.359	ENSGMOG00000010391	-	97	48.283	Gadus_morhua
ENSGACG00000005581	-	99	55.315	ENSGAFG00000015558	-	70	55.373	Gambusia_affinis
ENSGACG00000005581	-	98	59.083	ENSHBUG00000018525	-	68	61.243	Haplochromis_burtoni
ENSGACG00000005581	-	100	56.071	ENSKMAG00000004052	-	69	56.000	Kryptolebias_marmoratus
ENSGACG00000005581	-	98	60.294	ENSLBEG00000002779	-	74	61.060	Labrus_bergylta
ENSGACG00000005581	-	98	62.018	ENSMAMG00000011755	-	69	62.591	Mastacembelus_armatus
ENSGACG00000005581	-	54	43.168	ENSMGAG00000007123	-	85	42.188	Meleagris_gallopavo
ENSGACG00000005581	-	54	42.453	ENSMODG00000019019	-	89	44.340	Monodelphis_domestica
ENSGACG00000005581	-	97	60.589	ENSONIG00000002315	-	69	61.679	Oreochromis_niloticus
ENSGACG00000005581	-	99	52.545	ENSORLG00000011606	-	69	52.670	Oryzias_latipes
ENSGACG00000005581	-	99	51.818	ENSORLG00020019613	-	62	52.486	Oryzias_latipes_hni
ENSGACG00000005581	-	90	54.023	ENSORLG00015011568	-	89	53.161	Oryzias_latipes_hsok
ENSGACG00000005581	-	100	53.680	ENSOMEG00000009631	-	70	53.142	Oryzias_melastigma
ENSGACG00000005581	-	100	53.680	ENSOMEG00000016256	-	70	52.962	Oryzias_melastigma
ENSGACG00000005581	-	84	47.084	ENSPMGG00000001982	-	86	47.403	Periophthalmus_magnuspinnatus
ENSGACG00000005581	-	99	53.610	ENSPFOG00000008096	-	71	56.452	Poecilia_formosa
ENSGACG00000005581	-	99	53.430	ENSPLAG00000006973	-	70	56.102	Poecilia_latipinna
ENSGACG00000005581	-	99	52.708	ENSPMEG00000014457	-	71	55.914	Poecilia_mexicana
ENSGACG00000005581	-	98	61.905	ENSSMAG00000010735	-	73	62.295	Scophthalmus_maximus
ENSGACG00000005581	-	98	64.469	ENSSDUG00000009188	-	69	64.845	Seriola_dumerili
ENSGACG00000005581	-	69	89.286	ENSSLDG00000010034	-	91	63.444	Seriola_lalandi_dorsalis
ENSGACG00000005581	-	98	60.440	ENSSPAG00000016856	-	68	61.384	Stegastes_partitus
ENSGACG00000005581	-	95	58.095	ENSTRUG00000013414	-	87	60.227	Takifugu_rubripes
ENSGACG00000005581	-	81	55.799	ENSTNIG00000016976	-	94	55.799	Tetraodon_nigroviridis
ENSGACG00000005581	-	79	55.944	ENSXCOG00000020143	-	79	55.970	Xiphophorus_couchianus
ENSGACG00000005581	-	99	54.775	ENSXMAG00000002994	-	70	54.827	Xiphophorus_maculatus