EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGACG00000005641 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gasterosteus_aculeatus
Status: putative
Strand: Minus strand
Length: 3277 bases
Position: chrgroupV:7046532-7049808
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGACP00000007466	RRM_1	PF00076.22	1.5e-16	1	1
ENSGACP00000007459	RRM_1	PF00076.22	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGACT00000007485	-	1463	-	ENSGACP00000007466	268 (aa)	-	G3NQ50
ENSGACT00000007478	-	1531	-	ENSGACP00000007459	291 (aa)	-	G3NQ43

Gene Model

Click here to download ENSGACG00000005641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGACG00000005641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGACG00000005641	-	82	63.675	ENSGACG00000011261	RNPS1	83	61.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGACG00000005641	-	84	68.465	ENSG00000205937	RNPS1	85	68.465	Homo_sapiens
ENSGACG00000005641	-	82	68.398	ENSAPOG00000017310	RNPS1	74	65.217	Acanthochromis_polyacanthus
ENSGACG00000005641	-	75	62.857	ENSACIG00000014367	-	76	65.550	Amphilophus_citrinellus
ENSGACG00000005641	-	82	68.240	ENSAOCG00000002404	RNPS1	83	64.807	Amphiprion_ocellaris
ENSGACG00000005641	-	82	68.103	ENSAPEG00000006497	RNPS1	80	64.655	Amphiprion_percula
ENSGACG00000005641	-	77	70.952	ENSATEG00000000835	RNPS1	91	74.163	Anabas_testudineus
ENSGACG00000005641	-	84	68.050	ENSANAG00000028802	RNPS1	85	68.050	Aotus_nancymaae
ENSGACG00000005641	-	82	67.532	ENSACLG00000025942	RNPS1	82	66.667	Astatotilapia_calliptera
ENSGACG00000005641	-	82	76.419	ENSAMXG00000006330	-	82	75.109	Astyanax_mexicanus
ENSGACG00000005641	-	85	68.033	ENSBTAG00000009969	RNPS1	86	68.033	Bos_taurus
ENSGACG00000005641	-	84	68.465	ENSCJAG00000014969	RNPS1	90	63.721	Callithrix_jacchus
ENSGACG00000005641	-	76	65.596	ENSTSYG00000031848	-	89	61.404	Carlito_syrichta
ENSGACG00000005641	-	84	68.465	ENSTSYG00000001629	RNPS1	85	68.465	Carlito_syrichta
ENSGACG00000005641	-	84	68.050	ENSCPOG00000002066	RNPS1	85	68.050	Cavia_porcellus
ENSGACG00000005641	-	84	68.050	ENSCCAG00000034480	RNPS1	85	68.050	Cebus_capucinus
ENSGACG00000005641	-	95	60.595	ENSCATG00000042361	-	80	65.000	Cercocebus_atys
ENSGACG00000005641	-	84	68.465	ENSCATG00000013756	RNPS1	85	68.465	Cercocebus_atys
ENSGACG00000005641	-	84	68.465	ENSCLAG00000015546	RNPS1	85	68.465	Chinchilla_lanigera
ENSGACG00000005641	-	97	69.343	ENSCSAG00000005219	-	81	67.635	Chlorocebus_sabaeus
ENSGACG00000005641	-	75	52.217	ENSCPBG00000000214	RNPS1	58	77.686	Chrysemys_picta_bellii
ENSGACG00000005641	-	84	68.465	ENSCANG00000041307	RNPS1	85	68.465	Colobus_angolensis_palliatus
ENSGACG00000005641	-	84	68.465	ENSCGRG00001020431	Rnps1	85	68.465	Cricetulus_griseus_chok1gshd
ENSGACG00000005641	-	76	67.123	ENSCGRG00000014021	Rnps1	78	67.123	Cricetulus_griseus_crigri
ENSGACG00000005641	-	82	83.700	ENSCSEG00000000402	RNPS1	76	81.498	Cynoglossus_semilaevis
ENSGACG00000005641	-	82	65.948	ENSCSEG00000015997	RNPS1	80	65.086	Cynoglossus_semilaevis
ENSGACG00000005641	-	77	67.742	ENSCVAG00000010868	RNPS1	77	66.820	Cyprinodon_variegatus
ENSGACG00000005641	-	84	68.050	ENSDORG00000001755	Rnps1	85	68.050	Dipodomys_ordii
ENSGACG00000005641	-	75	70.531	ENSELUG00000015003	RNPS1	77	69.048	Esox_lucius
ENSGACG00000005641	-	84	68.050	ENSFCAG00000007690	RNPS1	85	68.050	Felis_catus
ENSGACG00000005641	-	84	67.083	ENSFALG00000004868	RNPS1	84	67.083	Ficedula_albicollis
ENSGACG00000005641	-	84	68.465	ENSFDAG00000003386	RNPS1	85	68.465	Fukomys_damarensis
ENSGACG00000005641	-	77	66.514	ENSFHEG00000011705	RNPS1	77	66.055	Fundulus_heteroclitus
ENSGACG00000005641	-	82	72.489	ENSGMOG00000001503	RNPS1	82	72.489	Gadus_morhua
ENSGACG00000005641	-	84	67.220	ENSGALG00000009288	RNPS1	85	67.220	Gallus_gallus
ENSGACG00000005641	-	77	64.977	ENSGAFG00000005457	RNPS1	77	64.055	Gambusia_affinis
ENSGACG00000005641	-	84	68.465	ENSGGOG00000014275	RNPS1	85	68.465	Gorilla_gorilla
ENSGACG00000005641	-	72	57.619	ENSGGOG00000026421	-	79	63.942	Gorilla_gorilla
ENSGACG00000005641	-	82	67.532	ENSHBUG00000002494	RNPS1	82	66.667	Haplochromis_burtoni
ENSGACG00000005641	-	84	68.465	ENSHGLG00000013957	RNPS1	85	68.465	Heterocephalus_glaber_female
ENSGACG00000005641	-	84	65.066	ENSHGLG00100001721	-	78	63.319	Heterocephalus_glaber_male
ENSGACG00000005641	-	76	56.818	ENSHGLG00100017879	-	68	52.535	Heterocephalus_glaber_male
ENSGACG00000005641	-	57	77.124	ENSHGLG00100015267	-	78	59.825	Heterocephalus_glaber_male
ENSGACG00000005641	-	84	68.465	ENSHGLG00100003539	RNPS1	85	68.465	Heterocephalus_glaber_male
ENSGACG00000005641	-	82	74.661	ENSHCOG00000002546	-	82	71.041	Hippocampus_comes
ENSGACG00000005641	-	84	67.105	ENSSTOG00000013200	RNPS1	83	66.228	Ictidomys_tridecemlineatus
ENSGACG00000005641	-	50	75.940	ENSJJAG00000000532	-	60	76.423	Jaculus_jaculus
ENSGACG00000005641	-	84	66.102	ENSJJAG00000019234	-	68	59.600	Jaculus_jaculus
ENSGACG00000005641	-	84	68.465	ENSJJAG00000015576	-	85	68.465	Jaculus_jaculus
ENSGACG00000005641	-	82	68.103	ENSKMAG00000009135	RNPS1	82	67.241	Kryptolebias_marmoratus
ENSGACG00000005641	-	84	63.596	ENSMFAG00000044121	-	83	63.596	Macaca_fascicularis
ENSGACG00000005641	-	84	68.465	ENSMFAG00000042142	RNPS1	85	68.465	Macaca_fascicularis
ENSGACG00000005641	-	71	58.738	ENSMMUG00000019238	-	79	64.706	Macaca_mulatta
ENSGACG00000005641	-	86	64.082	ENSMMUG00000041726	-	84	63.750	Macaca_mulatta
ENSGACG00000005641	-	86	64.490	ENSMNEG00000024827	-	84	64.167	Macaca_nemestrina
ENSGACG00000005641	-	84	68.465	ENSMLEG00000036928	RNPS1	85	68.465	Mandrillus_leucophaeus
ENSGACG00000005641	-	72	63.942	ENSMLEG00000040232	-	81	62.019	Mandrillus_leucophaeus
ENSGACG00000005641	-	82	63.636	ENSMAMG00000021609	-	83	65.665	Mastacembelus_armatus
ENSGACG00000005641	-	82	84.956	ENSMAMG00000021148	-	81	80.702	Mastacembelus_armatus
ENSGACG00000005641	-	82	67.532	ENSMZEG00005012742	RNPS1	82	66.667	Maylandia_zebra
ENSGACG00000005641	-	76	65.596	ENSMGAG00000010042	RNPS1	90	65.596	Meleagris_gallopavo
ENSGACG00000005641	-	84	68.465	ENSMICG00000031543	RNPS1	85	68.465	Microcebus_murinus
ENSGACG00000005641	-	84	68.465	ENSMOCG00000003429	Rnps1	85	68.465	Microtus_ochrogaster
ENSGACG00000005641	-	85	77.966	ENSMMOG00000004680	-	79	80.000	Mola_mola
ENSGACG00000005641	-	75	60.577	ENSMMOG00000010863	RNPS1	77	63.380	Mola_mola
ENSGACG00000005641	-	82	81.448	ENSMALG00000013384	-	85	83.710	Monopterus_albus
ENSGACG00000005641	-	84	68.465	ENSMUSG00000034681	Rnps1	85	68.465	Mus_musculus
ENSGACG00000005641	-	84	68.465	MGP_PahariEiJ_G0023498	Rnps1	85	68.465	Mus_pahari
ENSGACG00000005641	-	84	68.465	MGP_SPRETEiJ_G0022092	Rnps1	85	68.465	Mus_spretus
ENSGACG00000005641	-	84	68.465	ENSNGAG00000023702	Rnps1	85	68.465	Nannospalax_galili
ENSGACG00000005641	-	75	66.986	ENSNBRG00000023437	RNPS1	75	66.986	Neolamprologus_brichardi
ENSGACG00000005641	-	88	67.200	ENSNLEG00000009243	RNPS1	88	66.667	Nomascus_leucogenys
ENSGACG00000005641	-	82	73.362	ENSONIG00000019627	-	83	78.603	Oreochromis_niloticus
ENSGACG00000005641	-	76	71.674	ENSORLG00015011183	RNPS1	72	78.414	Oryzias_latipes_hsok
ENSGACG00000005641	-	87	65.323	ENSPPAG00000011845	RNPS1	86	64.730	Pan_paniscus
ENSGACG00000005641	-	84	68.050	ENSPPRG00000011255	RNPS1	85	68.050	Panthera_pardus
ENSGACG00000005641	-	54	73.103	ENSPTIG00000015643	RNPS1	64	79.339	Panthera_tigris_altaica
ENSGACG00000005641	-	84	68.050	ENSPTRG00000031310	RNPS1	85	68.050	Pan_troglodytes
ENSGACG00000005641	-	72	65.385	ENSPTRG00000046326	-	81	64.423	Pan_troglodytes
ENSGACG00000005641	-	70	48.000	ENSPANG00000033576	-	74	44.131	Papio_anubis
ENSGACG00000005641	-	84	68.465	ENSPANG00000015748	RNPS1	85	68.465	Papio_anubis
ENSGACG00000005641	-	84	68.465	ENSPEMG00000012797	Rnps1	85	68.465	Peromyscus_maniculatus_bairdii
ENSGACG00000005641	-	54	74.483	ENSPCIG00000016114	-	72	67.568	Phascolarctos_cinereus
ENSGACG00000005641	-	84	68.880	ENSPCIG00000025012	RNPS1	85	68.880	Phascolarctos_cinereus
ENSGACG00000005641	-	77	65.899	ENSPFOG00000009978	RNPS1	77	64.977	Poecilia_formosa
ENSGACG00000005641	-	77	65.899	ENSPLAG00000009343	RNPS1	77	64.977	Poecilia_latipinna
ENSGACG00000005641	-	77	65.899	ENSPMEG00000008552	RNPS1	77	64.977	Poecilia_mexicana
ENSGACG00000005641	-	77	65.899	ENSPREG00000001843	RNPS1	77	64.977	Poecilia_reticulata
ENSGACG00000005641	-	84	68.465	ENSPCOG00000005478	RNPS1	85	68.465	Propithecus_coquereli
ENSGACG00000005641	-	82	67.532	ENSPNYG00000000585	RNPS1	82	66.667	Pundamilia_nyererei
ENSGACG00000005641	-	82	74.672	ENSPNAG00000025479	RNPS1	82	75.546	Pygocentrus_nattereri
ENSGACG00000005641	-	84	62.551	ENSRBIG00000038965	-	88	68.333	Rhinopithecus_bieti
ENSGACG00000005641	-	84	68.465	ENSRROG00000041252	RNPS1	85	68.465	Rhinopithecus_roxellana
ENSGACG00000005641	-	84	68.465	ENSSBOG00000027927	RNPS1	85	68.465	Saimiri_boliviensis_boliviensis
ENSGACG00000005641	-	82	74.138	ENSSFOG00015019341	-	73	71.983	Scleropages_formosus
ENSGACG00000005641	-	82	67.373	ENSSFOG00015022746	RNPS1	85	63.136	Scleropages_formosus
ENSGACG00000005641	-	82	73.913	ENSSMAG00000016933	RNPS1	82	67.826	Scophthalmus_maximus
ENSGACG00000005641	-	80	66.071	ENSSLDG00000021341	RNPS1	81	65.179	Seriola_lalandi_dorsalis
ENSGACG00000005641	-	84	67.083	ENSTGUG00000003237	RNPS1	84	67.083	Taeniopygia_guttata
ENSGACG00000005641	-	84	59.426	ENSTRUG00000008602	RNPS1	83	59.426	Takifugu_rubripes
ENSGACG00000005641	-	84	60.494	ENSTNIG00000009753	RNPS1	81	60.494	Tetraodon_nigroviridis
ENSGACG00000005641	-	50	80.451	ENSTBEG00000009098	RNPS1	88	68.333	Tupaia_belangeri
ENSGACG00000005641	-	82	66.810	ENSXMAG00000004827	RNPS1	82	65.948	Xiphophorus_maculatus